Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is yfjG [C]

Identifier: 225630788

GI number: 225630788

Start: 1182971

End: 1183513

Strand: Direct

Name: yfjG [C]

Synonym: WRi_010910

Alternate gene names: 225630788

Gene position: 1182971-1183513 (Clockwise)

Preceding gene: 225630785

Following gene: 225630789

Centisome position: 81.82

GC content: 33.15

Gene sequence:

>543_bases
ATGCCCACCTTAACTTCAGGTCTCAGGAATCTACTAAGGCTGACGGTAGATACGGATCCTTTTTTGATTGGTACTAAATT
TATGCTTCATCAATACAGAGAACAAGGTACCTTCCTATGTTCGCCTAATGAAGTATTCCAAATTGTAATTGATGTTGAAA
GGTATCCTGATTTTGTTCCTTGGTGCAAAGCCGTTTATATAAAAGAAAAAATTGACAATCAAATGGTTGTGGACCTTCTA
GCAGCTTTTCATGGAATTAAAGGAAGATATACATCAGAGGTAACCTTTCTTTCTCCAAGTAGAACAAATGAAGGTTGGAT
AAAAGCTGTATCATCAAATGGAATATTTAAACATCTATGCAATAAATGGCAATTCATTCCCATAGATGAAAATAAAACTA
TGGTAAAGTTTTATATAGAGTTTAAGTTTAAGTCCAACTCATTTTCAACCCTATTAAACTCAGTATATAAATATACACAA
AGTAAAATAATTGCTGCATTTAAAGACAGGGCTGAAAGCCTTGCTAAACAAAAGTTACCTTGA

Upstream 100 bases:

>100_bases
AGGGGTCTGTGCTATGCGTTATGAGTTAAGTTAAATTTCCCGAGCGATAATTTCTAGAGAAGGGAATTGCCTCTGCTGGT
TTCGTTGAAACTAATATGCG

Downstream 100 bases:

>100_bases
CATTATTTATATAAATATATAATTTTTTTAGTAAGTTAAGTATTTATATCGTAATGATTTTTAGACTATTGCTTTTATCA
ATTTTTATAAGTGTTAATTC

Product: cyclase/dehydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVPWCKAVYIKEKIDNQMVVDLL
AAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLCNKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQ
SKIIAAFKDRAESLAKQKLP

Sequences:

>Translated_180_residues
MPTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVPWCKAVYIKEKIDNQMVVDLL
AAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLCNKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQ
SKIIAAFKDRAESLAKQKLP
>Mature_179_residues
PTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVPWCKAVYIKEKIDNQMVVDLLA
AFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLCNKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQS
KIIAAFKDRAESLAKQKLP

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Homo sapiens, GI151101386, Length=146, Percent_Identity=30.8219178082192, Blast_Score=70, Evalue=8e-13,
Organism=Homo sapiens, GI151101384, Length=146, Percent_Identity=30.8219178082192, Blast_Score=70, Evalue=9e-13,
Organism=Escherichia coli, GI1788972, Length=134, Percent_Identity=26.1194029850746, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 20865; Mature: 20734

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVP
CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEEECCHHEEEEEEEHHHCCCHHH
WCKAVYIKEKIDNQMVVDLLAAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLC
HHHHHHHHHHHCHHHHHHHHHHHHCCCCCEECEEEEECCCCCCCCCEEEECCCCHHHHHH
NKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQSKIIAAFKDRAESLAKQKLP
CCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVP
CCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEEECCHHEEEEEEEHHHCCCHHH
WCKAVYIKEKIDNQMVVDLLAAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLC
HHHHHHHHHHHCHHHHHHHHHHHHCCCCCEECEEEEECCCCCCCCCEEEECCCCHHHHHH
NKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQSKIIAAFKDRAESLAKQKLP
CCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]