| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is yfjG [C]
Identifier: 225630788
GI number: 225630788
Start: 1182971
End: 1183513
Strand: Direct
Name: yfjG [C]
Synonym: WRi_010910
Alternate gene names: 225630788
Gene position: 1182971-1183513 (Clockwise)
Preceding gene: 225630785
Following gene: 225630789
Centisome position: 81.82
GC content: 33.15
Gene sequence:
>543_bases ATGCCCACCTTAACTTCAGGTCTCAGGAATCTACTAAGGCTGACGGTAGATACGGATCCTTTTTTGATTGGTACTAAATT TATGCTTCATCAATACAGAGAACAAGGTACCTTCCTATGTTCGCCTAATGAAGTATTCCAAATTGTAATTGATGTTGAAA GGTATCCTGATTTTGTTCCTTGGTGCAAAGCCGTTTATATAAAAGAAAAAATTGACAATCAAATGGTTGTGGACCTTCTA GCAGCTTTTCATGGAATTAAAGGAAGATATACATCAGAGGTAACCTTTCTTTCTCCAAGTAGAACAAATGAAGGTTGGAT AAAAGCTGTATCATCAAATGGAATATTTAAACATCTATGCAATAAATGGCAATTCATTCCCATAGATGAAAATAAAACTA TGGTAAAGTTTTATATAGAGTTTAAGTTTAAGTCCAACTCATTTTCAACCCTATTAAACTCAGTATATAAATATACACAA AGTAAAATAATTGCTGCATTTAAAGACAGGGCTGAAAGCCTTGCTAAACAAAAGTTACCTTGA
Upstream 100 bases:
>100_bases AGGGGTCTGTGCTATGCGTTATGAGTTAAGTTAAATTTCCCGAGCGATAATTTCTAGAGAAGGGAATTGCCTCTGCTGGT TTCGTTGAAACTAATATGCG
Downstream 100 bases:
>100_bases CATTATTTATATAAATATATAATTTTTTTAGTAAGTTAAGTATTTATATCGTAATGATTTTTAGACTATTGCTTTTATCA ATTTTTATAAGTGTTAATTC
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVPWCKAVYIKEKIDNQMVVDLL AAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLCNKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQ SKIIAAFKDRAESLAKQKLP
Sequences:
>Translated_180_residues MPTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVPWCKAVYIKEKIDNQMVVDLL AAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLCNKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQ SKIIAAFKDRAESLAKQKLP >Mature_179_residues PTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVPWCKAVYIKEKIDNQMVVDLLA AFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLCNKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQS KIIAAFKDRAESLAKQKLP
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI151101386, Length=146, Percent_Identity=30.8219178082192, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI151101384, Length=146, Percent_Identity=30.8219178082192, Blast_Score=70, Evalue=9e-13, Organism=Escherichia coli, GI1788972, Length=134, Percent_Identity=26.1194029850746, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 20865; Mature: 20734
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVP CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEEECCHHEEEEEEEHHHCCCHHH WCKAVYIKEKIDNQMVVDLLAAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLC HHHHHHHHHHHCHHHHHHHHHHHHCCCCCEECEEEEECCCCCCCCCEEEECCCCHHHHHH NKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQSKIIAAFKDRAESLAKQKLP CCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTLTSGLRNLLRLTVDTDPFLIGTKFMLHQYREQGTFLCSPNEVFQIVIDVERYPDFVP CCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEEECCHHEEEEEEEHHHCCCHHH WCKAVYIKEKIDNQMVVDLLAAFHGIKGRYTSEVTFLSPSRTNEGWIKAVSSNGIFKHLC HHHHHHHHHHHCHHHHHHHHHHHHCCCCCEECEEEEECCCCCCCCCEEEECCCCHHHHHH NKWQFIPIDENKTMVKFYIEFKFKSNSFSTLLNSVYKYTQSKIIAAFKDRAESLAKQKLP CCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]