| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630677
Identifier: 225630677
GI number: 225630677
Start: 1042744
End: 1043937
Strand: Reverse
Name: 225630677
Synonym: WRi_009700
Alternate gene names: NA
Gene position: 1043937-1042744 (Counterclockwise)
Preceding gene: 225630678
Following gene: 225630672
Centisome position: 72.2
GC content: 39.95
Gene sequence:
>1194_bases ATGAATTTCAACATCTTTCAAAGAAAAAAAAGCGCAGTATTTACTAAATATTCTGCTTTGCAGCTAATGATGGAGCCAAG TTGGAGTAAGCGTGATTATGTAAGTTTTGCTGAGGAAGGTTACATAAAAAATGTTATTGCCTTTCGAGCAATCAATATGA TTGCAAGTGCTGCATCTTCGGTACCTCTTACTCTCTGCCAGCTTACTGACCAGGGAAAATCGCAACTAAAAGCCCATCCA TTACTGAAATTACTTTATTCTCCTAACCCAATGACATCAAAATCGGAATTTATTGAGGGGATTGTAACTTATCGGTTAGT TAACGGCAATTCTTATATATTGATGGTTGAGTCGCAGAACAATAGAAAACCACCAACAGAGCTTTATCTTCTGCGCCCAG ATAGGGTTGAAATTGTTCCAGGGAGAAATAACGTTCCTTATATCTATCGTTATGCCATAAATAACAACAGTTATGACTTT AAAGTTGATAAACTAACTGGATGTTCAGCAGTGTTGCACTTAAAGACCTTTAATCCTTTGAATGATTGGTATGGGCTATC ACCAATTGAGGCAGCTGCATATAGCATAGATCAGCATAATCAGGCGGGTGCTTGGAATCAAGCGATGTTGCAAAACGGAG CAAGACCAAGTGGTGCAATAGTTGTGAAATCAGCGAAAGATGGAAGTGGTGGAAGTTTAAGTCAAGAGCAGTACCAACGC TTAAAAGCGCAAATAAATGATCATTATTCAGGTTCTATAAACGCTGGAAGACCGATATTGCTTGAAGGAGGCTTGGAGTG GAAGGAAATGAGCTTATCACCAAGGGATATGGATTTTATTGAGTCCAAACACAGTTCAGCTCGTGATATTGCCCTGGCTT TTGGCGTTCCGCCGCAGTTGCTTGGCATACCAGGTGATAACACTTATAGCAATTTAGTCGAAGCACGCCTGTCCCTTTGG GAGCAGACGGTTTTACCAACGCTAGAAAATATTATCTGTCACCTGAATTCTTGGCTGATACCAAGATTTGGTGAAGATCT GTGCTTGTCGTATGACAAAGATACAATAGAAATTCTCATGGAAAAGAGACAAAAGTTGTGGAAATACGTAGAAAATGCAA GCTTTATGACACTCAATGAAAAAAGGGAAGCATTTGGCTTGCCACCACAGCCAGGTGGTGATAAATTGAGTTGA
Upstream 100 bases:
>100_bases AGAGATTGCTCTCAAACATAATGTTCGTACGTTAGTATATCCTTCCTGTGACACCAATTGATATAATTCTACCACAAATT CAATTTTTTAGGAGGCACAT
Downstream 100 bases:
>100_bases AGTTTTGATGTTTATTACTTATAGCTAAACTGACTTAGATTTATCGACAATTTGAAAAACCGTCATTCCGCTACTAGTTA GCGGAATCTATACCGCGAAT
Product: phage portal protein, HK97 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASSVPLTLCQLTDQGKSQLKAHP LLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQNNRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDF KVDKLTGCSAVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLW EQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILMEKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS
Sequences:
>Translated_397_residues MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASSVPLTLCQLTDQGKSQLKAHP LLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQNNRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDF KVDKLTGCSAVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLW EQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILMEKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS >Mature_397_residues MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASSVPLTLCQLTDQGKSQLKAHP LLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQNNRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDF KVDKLTGCSAVLHLKTFNPLNDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQLLGIPGDNTYSNLVEARLSLW EQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILMEKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage portal family. HK97 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006944 - InterPro: IPR006427 [H]
Pfam domain/function: PF04860 Phage_portal [H]
EC number: NA
Molecular weight: Translated: 44687; Mature: 44687
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASS CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC VPLTLCQLTDQGKSQLKAHPLLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQN CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEECCC NRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDFKVDKLTGCSAVLHLKTFNPL CCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCC NDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHH LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQL HHHHHCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCHHH LGIPGDNTYSNLVEARLSLWEQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILM EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCHHHHHHH EKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS HHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MNFNIFQRKKSAVFTKYSALQLMMEPSWSKRDYVSFAEEGYIKNVIAFRAINMIASAASS CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC VPLTLCQLTDQGKSQLKAHPLLKLLYSPNPMTSKSEFIEGIVTYRLVNGNSYILMVESQN CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEECCC NRKPPTELYLLRPDRVEIVPGRNNVPYIYRYAINNNSYDFKVDKLTGCSAVLHLKTFNPL CCCCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCC NDWYGLSPIEAAAYSIDQHNQAGAWNQAMLQNGARPSGAIVVKSAKDGSGGSLSQEQYQR HHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHH LKAQINDHYSGSINAGRPILLEGGLEWKEMSLSPRDMDFIESKHSSARDIALAFGVPPQL HHHHHCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCHHH LGIPGDNTYSNLVEARLSLWEQTVLPTLENIICHLNSWLIPRFGEDLCLSYDKDTIEILM EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCHHHHHHH EKRQKLWKYVENASFMTLNEKREAFGLPPQPGGDKLS HHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA