| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630678
Identifier: 225630678
GI number: 225630678
Start: 1044412
End: 1044645
Strand: Reverse
Name: 225630678
Synonym: WRi_009710
Alternate gene names: NA
Gene position: 1044645-1044412 (Counterclockwise)
Preceding gene: 225630681
Following gene: 225630677
Centisome position: 72.25
GC content: 33.76
Gene sequence:
>234_bases ATGGCAAACTCAAAATTTAGCATAACTTTCAACAACGAAATTTCAGAGTGTCTTGCTGGACTGGCTAAAATAAGAAATAA GTCCATTAAAGAACTAGCAGAGAAGCTAATACAAGAAGCAATTGAAAATGAGGAAGATAAAATACTAATTGAGCGTGCTG CTAGACGTAATGTTTCAGGTGTGAAGAAAATTAGAAGTGAGGATGTAGACTGGAATACAATATTATCTTCATAG
Upstream 100 bases:
>100_bases TTATTTGTCAACACAGGTCCTCTTTACGTATAGGCAACTTTTTTTATTGAAAAATTCAGAAAAATGTTGTATAATTATTA GTAGATTTTAGGTAAAATAT
Downstream 100 bases:
>100_bases AAAGCGTTCTTGAGAAAGACCTTCCAGCTCTTCCAAAAACAATAAGATTAAGGATCATAAATGCGATAAATAAGCGCCTT ACAGTTGATCCCATTAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MANSKFSITFNNEISECLAGLAKIRNKSIKELAEKLIQEAIENEEDKILIERAARRNVSGVKKIRSEDVDWNTILSS
Sequences:
>Translated_77_residues MANSKFSITFNNEISECLAGLAKIRNKSIKELAEKLIQEAIENEEDKILIERAARRNVSGVKKIRSEDVDWNTILSS >Mature_76_residues ANSKFSITFNNEISECLAGLAKIRNKSIKELAEKLIQEAIENEEDKILIERAARRNVSGVKKIRSEDVDWNTILSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8721; Mature: 8590
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSKFSITFNNEISECLAGLAKIRNKSIKELAEKLIQEAIENEEDKILIERAARRNVSG CCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH VKKIRSEDVDWNTILSS HHHHHHCCCCHHHHCCC >Mature Secondary Structure ANSKFSITFNNEISECLAGLAKIRNKSIKELAEKLIQEAIENEEDKILIERAARRNVSG CCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH VKKIRSEDVDWNTILSS HHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA