| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is hflK [H]
Identifier: 225630543
GI number: 225630543
Start: 857909
End: 858943
Strand: Direct
Name: hflK [H]
Synonym: WRi_007980
Alternate gene names: 225630543
Gene position: 857909-858943 (Clockwise)
Preceding gene: 225630542
Following gene: 225630544
Centisome position: 59.34
GC content: 34.98
Gene sequence:
>1035_bases ATGTTTGATGAGAATAATCCTTGGAATTTGGGAAAGAAACCGGTAGGGAACAAAACTCCTAATAATGAAGATATTTTAAG TAAAGCTGTATCTGATATAGGGTTCTTTCTTAATGGATTAACCAAAAACAGGGGCAAAAAACCTTATTTCATCATTTTCA TTATTTTGCTACTCTATGCTTGTACAGGCTTTTACATTGTTCACCCAAGTGAAGAAGGCATAGAACTTACCTTTGGTAAA TACTCTAACACAGAAATGTCCGGTTTGCGTTATCACTTCCCCTACCCTATTGGCAAGGTTTTTAAAGTGAACGTTAAGGA AGTAAATCGTGAAGAAATTGGGGTAAGTAGTTCTTATGGGCGAGATACAGATCGCGGTGAAGGCGTGATGCTAACTGGAG ATGAAAATATAGTCAACGTTAACTTCGAGGTTCAATGGCGCGTTAGAGATGCTAAGGACTATTTATTCAAAGTGCGGGAT TACAAACCCGGTTTCAGTGTTAAAAATGCTGCTGAAAGTGCCATGAGAGAAATAATAGGTAAAAATACGATCTCTTTTGC ACTTGGTCAAGGCAGACCAGAAATTTCTAGAGATACTAGAATTCTATTGCAGCAGATTCTTGATGGATACCAAATGGGTA TAGAGATTTTATCTGTTCAAATGAAAAAAATTGATCCACCAGAAAAAGTAATCAGTTCGTTTAGAGATGTACAAAGTGCT CGTGCAGACAAAGAGCGTACTATAAACGAAGCATATGCTTATAATAATGATATTATACCTCGAGCAAAGGGTGAAGCGAT AAAGATAAAATTAGATGCACAAGCATATGAAAATGAAGTAATAAATGAAGCAAAAGGTAATGCAAATCGCTTTTTATCTC TTTATGAGGAATATAGACAGAATCCTTCTCTCGTTAAGAATCGTATTTATCTTGAAACTATGGAAAATATTTTCAGTAAG GTAGACAAAGTTGTTGTAACTGATGATCTGAAAGGTATGTTTTCTTATTTACCTCTTACAAATTTAGGAAAATAA
Upstream 100 bases:
>100_bases ATCATGTCCTTCGCTCTGATAATTAATTTGTAAATAAAATAGTTTTGCATTTTCTTATAAGATGAGTAATATTAGCGTAT TAATTATAGAATCAATCATT
Downstream 100 bases:
>100_bases CCATGAGTAGTAATATTAAAATTGTTTTTGTTTCTGTATTTGTTGTTTTATTGATTGTTTTATCTAATTCAATATTTGTT GTGCAAGAAACAAAGCAAGC
Product: hflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFDENNPWNLGKKPVGNKTPNNEDILSKAVSDIGFFLNGLTKNRGKKPYFIIFIILLLYACTGFYIVHPSEEGIELTFGK YSNTEMSGLRYHFPYPIGKVFKVNVKEVNREEIGVSSSYGRDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRD YKPGFSVKNAAESAMREIIGKNTISFALGQGRPEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSA RADKERTINEAYAYNNDIIPRAKGEAIKIKLDAQAYENEVINEAKGNANRFLSLYEEYRQNPSLVKNRIYLETMENIFSK VDKVVVTDDLKGMFSYLPLTNLGK
Sequences:
>Translated_344_residues MFDENNPWNLGKKPVGNKTPNNEDILSKAVSDIGFFLNGLTKNRGKKPYFIIFIILLLYACTGFYIVHPSEEGIELTFGK YSNTEMSGLRYHFPYPIGKVFKVNVKEVNREEIGVSSSYGRDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRD YKPGFSVKNAAESAMREIIGKNTISFALGQGRPEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSA RADKERTINEAYAYNNDIIPRAKGEAIKIKLDAQAYENEVINEAKGNANRFLSLYEEYRQNPSLVKNRIYLETMENIFSK VDKVVVTDDLKGMFSYLPLTNLGK >Mature_344_residues MFDENNPWNLGKKPVGNKTPNNEDILSKAVSDIGFFLNGLTKNRGKKPYFIIFIILLLYACTGFYIVHPSEEGIELTFGK YSNTEMSGLRYHFPYPIGKVFKVNVKEVNREEIGVSSSYGRDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRD YKPGFSVKNAAESAMREIIGKNTISFALGQGRPEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSA RADKERTINEAYAYNNDIIPRAKGEAIKIKLDAQAYENEVINEAKGNANRFLSLYEEYRQNPSLVKNRIYLETMENIFSK VDKVVVTDDLKGMFSYLPLTNLGK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=281, Percent_Identity=38.0782918149466, Blast_Score=178, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 39225; Mature: 39225
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDENNPWNLGKKPVGNKTPNNEDILSKAVSDIGFFLNGLTKNRGKKPYFIIFIILLLYA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH CTGFYIVHPSEEGIELTFGKYSNTEMSGLRYHFPYPIGKVFKVNVKEVNREEIGVSSSYG HCCEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEHHHCCHHHCCCCCCCC RDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPGFSVKNAAESAMREIIG CCCCCCCEEEEECCCCEEEEEEEEEEEEECCHHHHEEHCCCCCCCCHHHHHHHHHHHHHC KNTISFALGQGRPEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSA CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RADKERTINEAYAYNNDIIPRAKGEAIKIKLDAQAYENEVINEAKGNANRFLSLYEEYRQ HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCC NPSLVKNRIYLETMENIFSKVDKVVVTDDLKGMFSYLPLTNLGK CHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFDENNPWNLGKKPVGNKTPNNEDILSKAVSDIGFFLNGLTKNRGKKPYFIIFIILLLYA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH CTGFYIVHPSEEGIELTFGKYSNTEMSGLRYHFPYPIGKVFKVNVKEVNREEIGVSSSYG HCCEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEHHHCCHHHCCCCCCCC RDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPGFSVKNAAESAMREIIG CCCCCCCEEEEECCCCEEEEEEEEEEEEECCHHHHEEHCCCCCCCCHHHHHHHHHHHHHC KNTISFALGQGRPEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSA CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RADKERTINEAYAYNNDIIPRAKGEAIKIKLDAQAYENEVINEAKGNANRFLSLYEEYRQ HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCC NPSLVKNRIYLETMENIFSKVDKVVVTDDLKGMFSYLPLTNLGK CHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]