| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630519
Identifier: 225630519
GI number: 225630519
Start: 833785
End: 834546
Strand: Reverse
Name: 225630519
Synonym: WRi_007710
Alternate gene names: NA
Gene position: 834546-833785 (Counterclockwise)
Preceding gene: 225630520
Following gene: 225630514
Centisome position: 57.72
GC content: 33.2
Gene sequence:
>762_bases ATGGATTATTGTAAATTGTTTGATGGAAATAATGGTCACATAGCATATCGAAAGCTACAAGGAAAGAAAGCTTCTGTAGT TTTTTTCGGTGGATTTGCATCCAATATGGATGGAACTAAAGCAACTGCTATTTACAAATTTTGCCAAGAAAATGACGTAG CACTTGTGCTATTTGATTATTTTGGTCACGGTCATTCAAGTGGTAATTTTATTGATTACACGATAAGTGATTGGCAAAAA AATTGTGCTAAAGTAATGAGTGAATTAACTAGCGATAAACAAATAATTATAGGTTCAAGTATGGGAGGGTGGCTGATGTT GCTCACTGCCCTTCAATTTCCAGAAAAAATTGCAGCACTAATTGGTATATCGTCTGCTCCCGATTTTACTGAAGATTTGA TATTCAAGCAATTGTCAGGCAAGCAAAAAGAAGAACTAGATTCTAAAGGTGTAATAGATTTTACTTCAGAGCATTGTACA TACAAAATAACTAAAAATTTGATCGAAGATGGCAGAAAGAACCTTCTTTTAAACAAAAAGACAATAGATATAAACTGTCC TGTGCGCTTGCTGCATAGCATTAATGATAAAGATGTTCCTTATCAAACTTCATTGAATTTAGCTGAAAAAATTAAGTCAA CCGATGTTGAAGTACACTTAATAAAATCAGCAGAGCACAATATGTCTGACAATCATTCACTGGAAGTTTTATTTAAGACC ATTAGAGAATTTTGTAACCAGACTGCATTCTGTGATTTTTAG
Upstream 100 bases:
>100_bases CGTATGGCATTTGCAGGTATTTCCAATCCACAAGAAATTGCAGATCTAGTTAGTTATTTGCATCAATTGAGTGATAGCCC GGTTGCTTTGCCAAAGTAGT
Downstream 100 bases:
>100_bases CAAAACACGATTTTTCATTTGAGCTTTCTTCAACTTAAAATAAATACAGAAAATTGCTGCCTATAGCTAAACTGACTTAG ATTTACCGACAATTTGAAAA
Product: hydrolase, alpha/beta fold family
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MDYCKLFDGNNGHIAYRKLQGKKASVVFFGGFASNMDGTKATAIYKFCQENDVALVLFDYFGHGHSSGNFIDYTISDWQK NCAKVMSELTSDKQIIIGSSMGGWLMLLTALQFPEKIAALIGISSAPDFTEDLIFKQLSGKQKEELDSKGVIDFTSEHCT YKITKNLIEDGRKNLLLNKKTIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLEVLFKT IREFCNQTAFCDF
Sequences:
>Translated_253_residues MDYCKLFDGNNGHIAYRKLQGKKASVVFFGGFASNMDGTKATAIYKFCQENDVALVLFDYFGHGHSSGNFIDYTISDWQK NCAKVMSELTSDKQIIIGSSMGGWLMLLTALQFPEKIAALIGISSAPDFTEDLIFKQLSGKQKEELDSKGVIDFTSEHCT YKITKNLIEDGRKNLLLNKKTIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLEVLFKT IREFCNQTAFCDF >Mature_253_residues MDYCKLFDGNNGHIAYRKLQGKKASVVFFGGFASNMDGTKATAIYKFCQENDVALVLFDYFGHGHSSGNFIDYTISDWQK NCAKVMSELTSDKQIIIGSSMGGWLMLLTALQFPEKIAALIGISSAPDFTEDLIFKQLSGKQKEELDSKGVIDFTSEHCT YKITKNLIEDGRKNLLLNKKTIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLEVLFKT IREFCNQTAFCDF
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=237, Percent_Identity=39.2405063291139, Blast_Score=181, Evalue=8e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28448; Mature: 28448
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYCKLFDGNNGHIAYRKLQGKKASVVFFGGFASNMDGTKATAIYKFCQENDVALVLFDY CCCEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEC FGHGHSSGNFIDYTISDWQKNCAKVMSELTSDKQIIIGSSMGGWLMLLTALQFPEKIAAL CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHHHHHHH IGISSAPDFTEDLIFKQLSGKQKEELDSKGVIDFTSEHCTYKITKNLIEDGRKNLLLNKK HCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCEEECCCCCCHHHHHHHHHCCHHCEEEECE TIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLEVLFKT EEEECCCHHHHHCCCCCCCCCHHCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH IREFCNQTAFCDF HHHHHCCCCCCCC >Mature Secondary Structure MDYCKLFDGNNGHIAYRKLQGKKASVVFFGGFASNMDGTKATAIYKFCQENDVALVLFDY CCCEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEC FGHGHSSGNFIDYTISDWQKNCAKVMSELTSDKQIIIGSSMGGWLMLLTALQFPEKIAAL CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHHHHHHH IGISSAPDFTEDLIFKQLSGKQKEELDSKGVIDFTSEHCTYKITKNLIEDGRKNLLLNKK HCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCEEECCCCCCHHHHHHHHHCCHHCEEEECE TIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLEVLFKT EEEECCCHHHHHCCCCCCCCCHHCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH IREFCNQTAFCDF HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA