Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630500

Identifier: 225630500

GI number: 225630500

Start: 813404

End: 813802

Strand: Reverse

Name: 225630500

Synonym: WRi_007510

Alternate gene names: NA

Gene position: 813802-813404 (Counterclockwise)

Preceding gene: 225630501

Following gene: 225630499

Centisome position: 56.28

GC content: 32.33

Gene sequence:

>399_bases
ATGCAATTTTGGCTACTTAAGTCAGAGCCAAGTGAATACTCATGGCAAAAAATGGAAAAGGAGCAGGTAGTTGAGTGGGA
TGGTGTGCGCAATTATCAAGCTCAAAATTACATGAAAATTATGAAAGCAAGCGATCTTGCGTTTTTTTATCATACAGGTA
AAGAGAAAGCAATACTTGGAATCGTTGAAGTATTTAAAGAGTATTATCATGTTAATGATCCCAAGTTCGGATTAGTGAAT
GTAAAGTTTTTGAAACCTTTAAATAACCAAGTAACGTTAAATAATATAAAACAAAACCCACTTTTGAAAAATATGACTAT
ATTAAAACAACCACGTTTATCAATTGCCCCAGTTTCGGAAATTGAATGGAATGAAATAATAAGGATGAGTGATGTGTAA

Upstream 100 bases:

>100_bases
ACAAAACACTGGAAACAAAACCAGCTGAACAGGTAAGCGAAGGAGCTAAGTGGGGCAGCAATATCTATGATATACCAGCT
TACTTAAGAAGAAAAAAATA

Downstream 100 bases:

>100_bases
TACCTGTCATTTCAGTTCCTAAATGATGTCATCTCAGCACACAACGCACAGCTGTATGAATATTTGTCTCGAAGGCAGTG
CATTAAACGTTATAGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILGIVEVFKEYYHVNDPKFGLVN
VKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSEIEWNEIIRMSDV

Sequences:

>Translated_132_residues
MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILGIVEVFKEYYHVNDPKFGLVN
VKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSEIEWNEIIRMSDV
>Mature_132_residues
MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILGIVEVFKEYYHVNDPKFGLVN
VKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSEIEWNEIIRMSDV

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=4e-16,
Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=4e-16,
Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=4e-16,
Organism=Homo sapiens, GI83267859, Length=78, Percent_Identity=42.3076923076923, Blast_Score=64, Evalue=2e-11,
Organism=Homo sapiens, GI40806219, Length=78, Percent_Identity=42.3076923076923, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15656; Mature: 15656

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILG
CEEEEECCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHH
IVEVFKEYYHVNDPKFGLVNVKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSE
HHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCC
IEWNEIIRMSDV
CCHHHEEEECCC
>Mature Secondary Structure
MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILG
CEEEEECCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHH
IVEVFKEYYHVNDPKFGLVNVKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSE
HHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCC
IEWNEIIRMSDV
CCHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA