| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630492
Identifier: 225630492
GI number: 225630492
Start: 804498
End: 806600
Strand: Direct
Name: 225630492
Synonym: WRi_007420
Alternate gene names: NA
Gene position: 804498-806600 (Clockwise)
Preceding gene: 225630488
Following gene: 225630494
Centisome position: 55.64
GC content: 37.09
Gene sequence:
>2103_bases ATGTCTATATTAAGAAGATTGCTCGGGATCAACTCAAATACACCGGAAATTAAAGAAGCGATAGGTTTTAATCCAACAAA CGTAGAATTAATTGAGGGGAATGGAGTTGCTTACGGACTCAGCTATCAAGATAATGGTAATGGGAGCAGTAAAGTAAAAT TACTTATTAGTCCATTATATCAATCAAAAACATACGAATGTGGTACAAATATCAGCGTAGCAAATGAATTCAAAGATCAA TTATCTCTCACATTAATAGAAGATTCAGCTGAAATAGATAAAGTTGGAGTTATCTTTCCTGAAGAAGGAATTAGCGAAGA AGGAGAAAAATGCGTTAAAGGCTTATCTTTTAACACTTACGGAATTAAACAATCAGTTAATACTCCTTCAGTTGAACATT TAGATAAAAGAAAATTACAAAAGAATATTGATAATAATAGTCTTGCAAATGTGGGCAATAGTTACTTTCAACCAAGAGCA GTGAAAGTTGGTAATGGTGACGTAATTGTAATCGCCCATAACTTAAAGGATCAAACTTTAGTTTCTTGGTACTTAAAGTC AAGCGAGAGCGGAAAATTTAAGGTATTGACTGGAGAAAAAGGTGTTACAGAAAGAAAATTGTTCAATTTTGATAATCAGG GGCAATTGGCATTAAATGGAAACACGATGCTTTATTCGCAAGTGAGCAAAAGGATTACTAAGGAAAATCAAGAGGTGAGA AAAACACGTATTTTTAAATTTGATATGGCTAAAGTGATTCAGGGTCTGAAGGATGGAGTTAATGGCTTTTTACTTGGTAA TCGAAAAGGTCAAATAGATAATAAAGCACTATCTCTTTCTAGAGAACATGAAATAAGCTTTTTGCAGTATGTTGAACAAA CGGAAGGAAATGATCTAGTTGCTTTTCTTGAAAATGACCAATCAGCTAATGAGCAGAGGTTACATATAGCAACTCCACTT AAAAATGGATCAGTGTCAGATTTTCCTATCTATCAATTTACAGATCCTATAGAGCAATTATATATTAAAGGCAACGGTCA GGGTGGTTTTATCGTAACTGCGGTAAGTGGAGAAAATATTGTAACTTTTAATCAAAACGGCTCTGGAAAATCTTCTGAAG CAACAATAATACCGGCAAATAGCATCAAAACTCTCAGTGATTTTGTTAATATCATTAACGGTCGATTAACGCCAGATATT ATTTCTAGTAGTACCGTGGCTCCTATAACTGTTGCAGAAACGGTTGTGACTTCTAAGAAAACGCCGACTGCTGCAATTAC TAGCACAGCAGAAACCGACGCTGTGAAGACTACTAAATTGACAACGGAAGCCGTTGCACCTACTTCTACAATAAGTAAAC CTTCAACGGAGTCAACGACAGTAGCAAAAACAACTACTACTTCACAAGCGACCACGGTTGCTACAACGTCAACTAGTGTG CCGATAGTAACTTCAGGGACTGAGACAAGTACTGTAAAACCTACAGCAGCGACTGGTGCGTCGACTTCTACGATGAGTAA ACCTTCAACAGAGTCAACGACTCAAACAAGTACAGTAACAGTGAAACCAACAACAGAAGCCGTTGCACCTACTTCTACAA CGAATAAACCTTCAACAGAGTCAACGACTCAAACAAGCACAGTAACAGTGGAACCAACTGCGCCAACAACAAGCTCAGAG AAAACTACACAAACAGTATTTAGTATACCAAGTACTAGAACAAAAGAGTCAACAACTCCTATATTCACCACGACTTTACT TCCTCAGTCTACTTCTTCACCACAACCTACTCAACTTGCTATAGGGTCTAATAAGGCAGGAATGATAGGGGGATCTTTGG TTGGAGCAATAGGTATTGTTGGAATTATAGGATTCATAGCATATAGATATGTTAAGGGTCGTAATGCTGCTCCTGTATTA GAACTAACTGATTTGGGTTATAGAAGGCGATCATCTTCAAGTAGCGATGAAGAAATTTTTACCACTGGTAACAGAATGCG AACTATATATCAATCTGAAACAGTGCTAAATAGTATATCAGTAGAAAGTAGTAGTCGATCAAGAAGTAGCTCATCGTCTT CAAGCGGTGGACCAGGCTCTTGA
Upstream 100 bases:
>100_bases AAAATATTATATTAATTTTTTAATTTTAGTTAAAATTTTCATTGACATTAACACACAGGAGTAATCATAATAGCATTTTA TTAATATTTTAAATAAAATT
Downstream 100 bases:
>100_bases CTAACTGAAGCGGAGTCTAAAAGTGAAAAAAGCTTATCTTGGGATAGTGATGATGTGCCGGAATATCACCTTTAGCTATT TGTCTAAATGTTTTTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MSILRRLLGINSNTPEIKEAIGFNPTNVELIEGNGVAYGLSYQDNGNGSSKVKLLISPLYQSKTYECGTNISVANEFKDQ LSLTLIEDSAEIDKVGVIFPEEGISEEGEKCVKGLSFNTYGIKQSVNTPSVEHLDKRKLQKNIDNNSLANVGNSYFQPRA VKVGNGDVIVIAHNLKDQTLVSWYLKSSESGKFKVLTGEKGVTERKLFNFDNQGQLALNGNTMLYSQVSKRITKENQEVR KTRIFKFDMAKVIQGLKDGVNGFLLGNRKGQIDNKALSLSREHEISFLQYVEQTEGNDLVAFLENDQSANEQRLHIATPL KNGSVSDFPIYQFTDPIEQLYIKGNGQGGFIVTAVSGENIVTFNQNGSGKSSEATIIPANSIKTLSDFVNIINGRLTPDI ISSSTVAPITVAETVVTSKKTPTAAITSTAETDAVKTTKLTTEAVAPTSTISKPSTESTTVAKTTTTSQATTVATTSTSV PIVTSGTETSTVKPTAATGASTSTMSKPSTESTTQTSTVTVKPTTEAVAPTSTTNKPSTESTTQTSTVTVEPTAPTTSSE KTTQTVFSIPSTRTKESTTPIFTTTLLPQSTSSPQPTQLAIGSNKAGMIGGSLVGAIGIVGIIGFIAYRYVKGRNAAPVL ELTDLGYRRRSSSSSDEEIFTTGNRMRTIYQSETVLNSISVESSSRSRSSSSSSSGGPGS
Sequences:
>Translated_700_residues MSILRRLLGINSNTPEIKEAIGFNPTNVELIEGNGVAYGLSYQDNGNGSSKVKLLISPLYQSKTYECGTNISVANEFKDQ LSLTLIEDSAEIDKVGVIFPEEGISEEGEKCVKGLSFNTYGIKQSVNTPSVEHLDKRKLQKNIDNNSLANVGNSYFQPRA VKVGNGDVIVIAHNLKDQTLVSWYLKSSESGKFKVLTGEKGVTERKLFNFDNQGQLALNGNTMLYSQVSKRITKENQEVR KTRIFKFDMAKVIQGLKDGVNGFLLGNRKGQIDNKALSLSREHEISFLQYVEQTEGNDLVAFLENDQSANEQRLHIATPL KNGSVSDFPIYQFTDPIEQLYIKGNGQGGFIVTAVSGENIVTFNQNGSGKSSEATIIPANSIKTLSDFVNIINGRLTPDI ISSSTVAPITVAETVVTSKKTPTAAITSTAETDAVKTTKLTTEAVAPTSTISKPSTESTTVAKTTTTSQATTVATTSTSV PIVTSGTETSTVKPTAATGASTSTMSKPSTESTTQTSTVTVKPTTEAVAPTSTTNKPSTESTTQTSTVTVEPTAPTTSSE KTTQTVFSIPSTRTKESTTPIFTTTLLPQSTSSPQPTQLAIGSNKAGMIGGSLVGAIGIVGIIGFIAYRYVKGRNAAPVL ELTDLGYRRRSSSSSDEEIFTTGNRMRTIYQSETVLNSISVESSSRSRSSSSSSSGGPGS >Mature_699_residues SILRRLLGINSNTPEIKEAIGFNPTNVELIEGNGVAYGLSYQDNGNGSSKVKLLISPLYQSKTYECGTNISVANEFKDQL SLTLIEDSAEIDKVGVIFPEEGISEEGEKCVKGLSFNTYGIKQSVNTPSVEHLDKRKLQKNIDNNSLANVGNSYFQPRAV KVGNGDVIVIAHNLKDQTLVSWYLKSSESGKFKVLTGEKGVTERKLFNFDNQGQLALNGNTMLYSQVSKRITKENQEVRK TRIFKFDMAKVIQGLKDGVNGFLLGNRKGQIDNKALSLSREHEISFLQYVEQTEGNDLVAFLENDQSANEQRLHIATPLK NGSVSDFPIYQFTDPIEQLYIKGNGQGGFIVTAVSGENIVTFNQNGSGKSSEATIIPANSIKTLSDFVNIINGRLTPDII SSSTVAPITVAETVVTSKKTPTAAITSTAETDAVKTTKLTTEAVAPTSTISKPSTESTTVAKTTTTSQATTVATTSTSVP IVTSGTETSTVKPTAATGASTSTMSKPSTESTTQTSTVTVKPTTEAVAPTSTTNKPSTESTTQTSTVTVEPTAPTTSSEK TTQTVFSIPSTRTKESTTPIFTTTLLPQSTSSPQPTQLAIGSNKAGMIGGSLVGAIGIVGIIGFIAYRYVKGRNAAPVLE LTDLGYRRRSSSSSDEEIFTTGNRMRTIYQSETVLNSISVESSSRSRSSSSSSSGGPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI221472639, Length=255, Percent_Identity=28.6274509803922, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74653; Mature: 74522
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILRRLLGINSNTPEIKEAIGFNPTNVELIEGNGVAYGLSYQDNGNGSSKVKLLISPLY CHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEHH QSKTYECGTNISVANEFKDQLSLTLIEDSAEIDKVGVIFPEEGISEEGEKCVKGLSFNTY CCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCC GIKQSVNTPSVEHLDKRKLQKNIDNNSLANVGNSYFQPRAVKVGNGDVIVIAHNLKDQTL CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCEE VSWYLKSSESGKFKVLTGEKGVTERKLFNFDNQGQLALNGNTMLYSQVSKRITKENQEVR EEEEEECCCCCCEEEEECCCCCCHHHHCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHH KTRIFKFDMAKVIQGLKDGVNGFLLGNRKGQIDNKALSLSREHEISFLQYVEQTEGNDLV HHHEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCEE AFLENDQSANEQRLHIATPLKNGSVSDFPIYQFTDPIEQLYIKGNGQGGFIVTAVSGENI EEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCEEEEEECCCEE VTFNQNGSGKSSEATIIPANSIKTLSDFVNIINGRLTPDIISSSTVAPITVAETVVTSKK EEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEHHHHHHCCC TPTAAITSTAETDAVKTTKLTTEAVAPTSTISKPSTESTTVAKTTTTSQATTVATTSTSV CCCEEEECCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCC PIVTSGTETSTVKPTAATGASTSTMSKPSTESTTQTSTVTVKPTTEAVAPTSTTNKPSTE EEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC STTQTSTVTVEPTAPTTSSEKTTQTVFSIPSTRTKESTTPIFTTTLLPQSTSSPQPTQLA CCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE IGSNKAGMIGGSLVGAIGIVGIIGFIAYRYVKGRNAAPVLELTDLGYRRRSSSSSDEEIF ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHCCCCCCCCEEE TTGNRMRTIYQSETVLNSISVESSSRSRSSSSSSSGGPGS ECCCCEEEEEHHHHHHHHEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SILRRLLGINSNTPEIKEAIGFNPTNVELIEGNGVAYGLSYQDNGNGSSKVKLLISPLY HHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEEEEHH QSKTYECGTNISVANEFKDQLSLTLIEDSAEIDKVGVIFPEEGISEEGEKCVKGLSFNTY CCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCC GIKQSVNTPSVEHLDKRKLQKNIDNNSLANVGNSYFQPRAVKVGNGDVIVIAHNLKDQTL CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCEE VSWYLKSSESGKFKVLTGEKGVTERKLFNFDNQGQLALNGNTMLYSQVSKRITKENQEVR EEEEEECCCCCCEEEEECCCCCCHHHHCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHH KTRIFKFDMAKVIQGLKDGVNGFLLGNRKGQIDNKALSLSREHEISFLQYVEQTEGNDLV HHHEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCEE AFLENDQSANEQRLHIATPLKNGSVSDFPIYQFTDPIEQLYIKGNGQGGFIVTAVSGENI EEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCEEEEEECCCEE VTFNQNGSGKSSEATIIPANSIKTLSDFVNIINGRLTPDIISSSTVAPITVAETVVTSKK EEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEHHHHHHCCC TPTAAITSTAETDAVKTTKLTTEAVAPTSTISKPSTESTTVAKTTTTSQATTVATTSTSV CCCEEEECCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCC PIVTSGTETSTVKPTAATGASTSTMSKPSTESTTQTSTVTVKPTTEAVAPTSTTNKPSTE EEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC STTQTSTVTVEPTAPTTSSEKTTQTVFSIPSTRTKESTTPIFTTTLLPQSTSSPQPTQLA CCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE IGSNKAGMIGGSLVGAIGIVGIIGFIAYRYVKGRNAAPVLELTDLGYRRRSSSSSDEEIF ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHCCCCCCCCEEE TTGNRMRTIYQSETVLNSISVESSSRSRSSSSSSSGGPGS ECCCCEEEEEHHHHHHHHEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA