| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630470
Identifier: 225630470
GI number: 225630470
Start: 774264
End: 774635
Strand: Reverse
Name: 225630470
Synonym: WRi_007160
Alternate gene names: NA
Gene position: 774635-774264 (Counterclockwise)
Preceding gene: 225630471
Following gene: 225630469
Centisome position: 53.58
GC content: 38.71
Gene sequence:
>372_bases ATGAGTTGTATAAGCGAACAAAATAATCTGGGTGACTTATTAAAGTATGAGGTGTCAAGTCTATATTCAAGAGATCAGAT AACAGTAGCCAAGGGACAAAATATTAAGCTTGGTGCAGTAGTTGCCAAAAAGACGGAAGATGGTCTTATTAGAGTACTTA ATCCCGCTGGAACAGATGGCACACAAACAGCGATAGGTGTAATAGTAAGTGATGTAAATGCAATAGAAAATACTAAAGCG GTAATTGTTACTCGTGTTGCAATACTAGCAGATCATGCAGTGGTGTGGCCAGCAAATATCACTGAAGAGCAAAAAGCTGA AGTAATAAAGCAACTTGAAGGACGAGGGATCATTATCCGCAAGGGAGTTTAA
Upstream 100 bases:
>100_bases ATGATGCAGGTAGCGAAAAGTCGTAGGAGTTAAAGTATTTTTATAACCGCCGTATATAGCATTGATAAAAGCGGCGGTAA TCAGTTAAGGAGAGAAATTT
Downstream 100 bases:
>100_bases CTAAAATTAATAAGGGGAAAAAAGAATGCAAAATCCATTTACAAATACAGCATTTAGCATGACGGCACTAACAAATGCGA TGAATATATTGCCGATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Protein GP
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSCISEQNNLGDLLKYEVSSLYSRDQITVAKGQNIKLGAVVAKKTEDGLIRVLNPAGTDGTQTAIGVIVSDVNAIENTKA VIVTRVAILADHAVVWPANITEEQKAEVIKQLEGRGIIIRKGV
Sequences:
>Translated_123_residues MSCISEQNNLGDLLKYEVSSLYSRDQITVAKGQNIKLGAVVAKKTEDGLIRVLNPAGTDGTQTAIGVIVSDVNAIENTKA VIVTRVAILADHAVVWPANITEEQKAEVIKQLEGRGIIIRKGV >Mature_122_residues SCISEQNNLGDLLKYEVSSLYSRDQITVAKGQNIKLGAVVAKKTEDGLIRVLNPAGTDGTQTAIGVIVSDVNAIENTKAV IVTRVAILADHAVVWPANITEEQKAEVIKQLEGRGIIIRKGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13166; Mature: 13035
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCISEQNNLGDLLKYEVSSLYSRDQITVAKGQNIKLGAVVAKKTEDGLIRVLNPAGTDG CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCC TQTAIGVIVSDVNAIENTKAVIVTRVAILADHAVVWPANITEEQKAEVIKQLEGRGIIIR CHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEE KGV ECC >Mature Secondary Structure SCISEQNNLGDLLKYEVSSLYSRDQITVAKGQNIKLGAVVAKKTEDGLIRVLNPAGTDG CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCC TQTAIGVIVSDVNAIENTKAVIVTRVAILADHAVVWPANITEEQKAEVIKQLEGRGIIIR CHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEEE KGV ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA