| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630469
Identifier: 225630469
GI number: 225630469
Start: 773234
End: 774238
Strand: Reverse
Name: 225630469
Synonym: WRi_007150
Alternate gene names: NA
Gene position: 774238-773234 (Counterclockwise)
Preceding gene: 225630470
Following gene: 225630468
Centisome position: 53.55
GC content: 39.0
Gene sequence:
>1005_bases ATGCAAAATCCATTTACAAATACAGCATTTAGCATGACGGCACTAACAAATGCGATGAATATATTGCCGATAAATTATGG ACGTGTTGAAAATTTAAATTTGTTTCCAAGTAGGTCAGTAAGATTTAGACATATTACCATAGAAGAACACAACGGAGTGT TAAGTTTACTACCAACGCAAGTACCCGGAGCACCAGCAACAGTAGGAAAAAGAGGAAAAAGAAAGGTAAGAACATTTACG ATTCCGCACATTCCGCATGATGATGTAGTGCTGCCAGAAGAAGTACAAGGAATAAGGGCATTTGGATCAGAGAGTGAACT TAAAGCGCTTGCAGATGTAATAACTGATCATTTGCAGCTAATGAGAAACAAACATGCAATAACATTAGAGCATTTGCGAA TGGGAGCGCTCAAAGGAATAATTTTAGATGCTGATGGGTCAGAATTATTAAATCTGTACAACGAATTTGAAATAACACCA AAAGTAGTAAATTTTGCCCTGGGAACAGCAACAACTGATGTAAAACGTAAGTGTCTGGAAGTATTGCGGCATATTGAAGA CAACTTAAGTGGTGAATATATGACCGGGATTCATGCACTGGTAAGCCCTGAGTTTTTTGATGCACTCACTTCTCATGCTA AAGTAAAAGAAGCATATGAAAGATGGCAAGAAGGAGCAGCGCTAAGGAATGATATGAGGTCAGGATTTACGTTCTGTGGA ATCACATTTGAGGAATATAGAGGGCAAGCAACTGATCCTGAAGGAACCGTGAGAAGATTTATAGAAAGAGATACAGGTCA CTGTTTTCCACTAGGAACAGCAAGTACATTTACAACATATTTTGCACCAGCAGATTTTAATGAGACAGTAAATACTCTTG GGCAGCCACTATATGCAAAACAAGGGCCAAGAAGATTTGATAGAGGGACCGATTTACATACGCAGTCAAATCCTCTGCCA ATGTGCCACCGTCCAGCAACATTAATCAAGATTGTTGCAACATAG
Upstream 100 bases:
>100_bases ATCACTGAAGAGCAAAAAGCTGAAGTAATAAAGCAACTTGAAGGACGAGGGATCATTATCCGCAAGGGAGTTTAACTAAA ATTAATAAGGGGAAAAAAGA
Downstream 100 bases:
>100_bases GTAGAGCAAATATAAAGCGGTGTGAGGCAGAAGAATGCTTTACCTCTTCTTAGCATATAAATGTTAGTATATAGCGGAGA AATGTGCAAGAGAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MQNPFTNTAFSMTALTNAMNILPINYGRVENLNLFPSRSVRFRHITIEEHNGVLSLLPTQVPGAPATVGKRGKRKVRTFT IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGTATTDVKRKCLEVLRHIEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGTVRRFIERDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQGPRRFDRGTDLHTQSNPLP MCHRPATLIKIVAT
Sequences:
>Translated_334_residues MQNPFTNTAFSMTALTNAMNILPINYGRVENLNLFPSRSVRFRHITIEEHNGVLSLLPTQVPGAPATVGKRGKRKVRTFT IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGTATTDVKRKCLEVLRHIEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGTVRRFIERDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQGPRRFDRGTDLHTQSNPLP MCHRPATLIKIVAT >Mature_334_residues MQNPFTNTAFSMTALTNAMNILPINYGRVENLNLFPSRSVRFRHITIEEHNGVLSLLPTQVPGAPATVGKRGKRKVRTFT IPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQLMRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITP KVVNFALGTATTDVKRKCLEVLRHIEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG ITFEEYRGQATDPEGTVRRFIERDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAKQGPRRFDRGTDLHTQSNPLP MCHRPATLIKIVAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37350; Mature: 37350
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPFTNTAFSMTALTNAMNILPINYGRVENLNLFPSRSVRFRHITIEEHNGVLSLLPTQ CCCCCCCCHHHHHHHHHCHHEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC VPGAPATVGKRGKRKVRTFTIPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQL CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGTATTDVKRKCLE HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH VLRHIEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITFEEYRGQATDPEGTVRRFIERDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK EEHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCHHHC QGPRRFDRGTDLHTQSNPLPMCHRPATLIKIVAT CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MQNPFTNTAFSMTALTNAMNILPINYGRVENLNLFPSRSVRFRHITIEEHNGVLSLLPTQ CCCCCCCCHHHHHHHHHCHHEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC VPGAPATVGKRGKRKVRTFTIPHIPHDDVVLPEEVQGIRAFGSESELKALADVITDHLQL CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MRNKHAITLEHLRMGALKGIILDADGSELLNLYNEFEITPKVVNFALGTATTDVKRKCLE HHCCCCEEHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH VLRHIEDNLSGEYMTGIHALVSPEFFDALTSHAKVKEAYERWQEGAALRNDMRSGFTFCG HHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITFEEYRGQATDPEGTVRRFIERDTGHCFPLGTASTFTTYFAPADFNETVNTLGQPLYAK EEHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHEEEECCCCCHHHHHHCCCCHHHC QGPRRFDRGTDLHTQSNPLPMCHRPATLIKIVAT CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA