| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630419
Identifier: 225630419
GI number: 225630419
Start: 706470
End: 706898
Strand: Reverse
Name: 225630419
Synonym: WRi_006540
Alternate gene names: NA
Gene position: 706898-706470 (Counterclockwise)
Preceding gene: 225630421
Following gene: 225630418
Centisome position: 48.89
GC content: 31.47
Gene sequence:
>429_bases ATGAAAATACAATGTTATAATTGTACTAAGACTTACTTAGTATCTCCTAAGCAAATTGGTGCGTCTGGAAGAAAGGTAAA ATGTACGCACTGCAATCACATATGGCATGAATATCTAGAAGAAGTGTCAAACAAATCGCACTCTGCTAATATACAGGAAA AAAAAGTTAGTGGAAGGAATTTTTTACAAAATCTAGCATTTACCACTCTAGCTTTTGCAACAGCTACAGGGTTATGCATT GTAATTGCTAATGGCATCTTTCCTAGAGAGATGAACAAAGCATACAAAACGATCAGTTCATATAAGGATTCAATAAGCTA TAAATTAGGGTACAAAAAAGAACAAACAGAAAGTCCAAATGTAAAAAAACTTGCTGTAAATAAGTTTTATCAAGACTACC TTTTTTTATCTAATTTAAGATCTAGTTAA
Upstream 100 bases:
>100_bases TTTTTTTTAGTTGCAAACCTTCCATTTGTTATATATATATTGATATTAAATTTGTAGCTCTGTATCATTTAAGCTTGTTA CTACTTTATACGTAAGTACT
Downstream 100 bases:
>100_bases ATAGGCATACCGATATCAGTATCCAGTTTCTATAGCTACTCAGATGGTGCGCATAGTATTAGGGTGACAGAGTTTTAAAA ATAAGTTATTTTTTAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKIQCYNCTKTYLVSPKQIGASGRKVKCTHCNHIWHEYLEEVSNKSHSANIQEKKVSGRNFLQNLAFTTLAFATATGLCI VIANGIFPREMNKAYKTISSYKDSISYKLGYKKEQTESPNVKKLAVNKFYQDYLFLSNLRSS
Sequences:
>Translated_142_residues MKIQCYNCTKTYLVSPKQIGASGRKVKCTHCNHIWHEYLEEVSNKSHSANIQEKKVSGRNFLQNLAFTTLAFATATGLCI VIANGIFPREMNKAYKTISSYKDSISYKLGYKKEQTESPNVKKLAVNKFYQDYLFLSNLRSS >Mature_142_residues MKIQCYNCTKTYLVSPKQIGASGRKVKCTHCNHIWHEYLEEVSNKSHSANIQEKKVSGRNFLQNLAFTTLAFATATGLCI VIANGIFPREMNKAYKTISSYKDSISYKLGYKKEQTESPNVKKLAVNKFYQDYLFLSNLRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16204; Mature: 16204
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQCYNCTKTYLVSPKQIGASGRKVKCTHCNHIWHEYLEEVSNKSHSANIQEKKVSGRN CEEEEECCCHHEEECHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH FLQNLAFTTLAFATATGLCIVIANGIFPREMNKAYKTISSYKDSISYKLGYKKEQTESPN HHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VKKLAVNKFYQDYLFLSNLRSS HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIQCYNCTKTYLVSPKQIGASGRKVKCTHCNHIWHEYLEEVSNKSHSANIQEKKVSGRN CEEEEECCCHHEEECHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH FLQNLAFTTLAFATATGLCIVIANGIFPREMNKAYKTISSYKDSISYKLGYKKEQTESPN HHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VKKLAVNKFYQDYLFLSNLRSS HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA