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The map label for this gene is rpe [H]

Identifier: 225630418

GI number: 225630418

Start: 705678

End: 706358

Strand: Reverse

Name: rpe [H]

Synonym: WRi_006530

Alternate gene names: 225630418

Gene position: 706358-705678 (Counterclockwise)

Preceding gene: 225630419

Following gene: 225630415

Centisome position: 48.85

GC content: 35.1

Gene sequence:

>681_bases
ATGAGTATTAAAATTGCACCTTCTATACTTTCAGCAGATTTTGCAAAATTAGGGGAAGAAGTAAGAAAAATTAGCGATTT
AGGTGTGGATTACATACACATAGACGTTATGGATGGGAATTTCGTTCCAAATATTACAATTGGTCCTAGCGTTGTTTCTG
CAATACGTAAATATAGCAATCTTCCTTTTGATGTGCATTTAATGGTCACATCTCCTGGTAACCACATTGAAAGCTTTATA
AATGCTGGTGCTGATATTATCACTGTACATGCAGAAGCAGAGATACACCTTGAGAGGTTGATAAGAAAGATAAAGTCATA
CAAAAATGTAAACGACGAAAAAAAACCGATTCAAGTTGGAGTTTCAATTGTTCCTTCAACTTCTCCAAGTGTGCTTGAAT
ACATAATACATGAGCTAGATATTGTGCTGATTATGACAGTCAACCCTGGCTTTGGAGGACAGGAATTCATTCATTCACAG
TTGAACAAGATATCTACTATAAAAAAAATGATACAGGAGCGTAATCTTAAAACACAAATTTCAGTAGATGGTGGAATTAA
CTTTTCTAACGCAGCTGATATAATAAAAGCAGGTGCTGATATTTTAGTTGCGGGATCGGCGATATTCAAGGCTGAAGATA
TTAAGAAGGCCGTAAACGATCTTAAAAATCTATTGTTGTGA

Upstream 100 bases:

>100_bases
GATATCAGTATCCAGTTTCTATAGCTACTCAGATGGTGCGCATAGTATTAGGGTGACAGAGTTTTAAAAATAAGTTATTT
TTTAGCAAAAAAGGCAGCTC

Downstream 100 bases:

>100_bases
CCCTATATAGCTAAAGTGGCTTAGGTTTACCTACAATTTGAAAAACAACAAATTCGTCATTCCGCTACTCGTTAGCGGAA
TCTATGCTGAGATACCGCGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNLPFDVHLMVTSPGNHIESFI
NAGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVGVSIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQ
LNKISTIKKMIQERNLKTQISVDGGINFSNAADIIKAGADILVAGSAIFKAEDIKKAVNDLKNLLL

Sequences:

>Translated_226_residues
MSIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNLPFDVHLMVTSPGNHIESFI
NAGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVGVSIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQ
LNKISTIKKMIQERNLKTQISVDGGINFSNAADIIKAGADILVAGSAIFKAEDIKKAVNDLKNLLL
>Mature_225_residues
SIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNLPFDVHLMVTSPGNHIESFIN
AGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVGVSIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQL
NKISTIKKMIQERNLKTQISVDGGINFSNAADIIKAGADILVAGSAIFKAEDIKKAVNDLKNLLL

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=226, Percent_Identity=38.0530973451327, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI219879828, Length=225, Percent_Identity=36.4444444444444, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI24307923, Length=171, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=5e-21,
Organism=Escherichia coli, GI1789788, Length=222, Percent_Identity=44.1441441441441, Blast_Score=193, Evalue=7e-51,
Organism=Escherichia coli, GI1790523, Length=218, Percent_Identity=38.9908256880734, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1790754, Length=222, Percent_Identity=28.8288288288288, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17552948, Length=227, Percent_Identity=41.4096916299559, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=232, Percent_Identity=38.7931034482759, Blast_Score=163, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24586301, Length=223, Percent_Identity=36.322869955157, Blast_Score=149, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24665; Mature: 24534

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSN
CCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEECHHHHHHHHHHCC
LPFDVHLMVTSPGNHIESFINAGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVG
CCEEEEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
VSIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQLNKISTIKKMIQERNLKTQI
EEEECCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SVDGGINFSNAADIIKAGADILVAGSAIFKAEDIKKAVNDLKNLLL
EECCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSN
CEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEECHHHHHHHHHHCC
LPFDVHLMVTSPGNHIESFINAGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVG
CCEEEEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
VSIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQLNKISTIKKMIQERNLKTQI
EEEECCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
SVDGGINFSNAADIIKAGADILVAGSAIFKAEDIKKAVNDLKNLLL
EECCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]