| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630382
Identifier: 225630382
GI number: 225630382
Start: 653439
End: 653969
Strand: Reverse
Name: 225630382
Synonym: WRi_006080
Alternate gene names: NA
Gene position: 653969-653439 (Counterclockwise)
Preceding gene: 225630391
Following gene: 225630380
Centisome position: 45.23
GC content: 30.89
Gene sequence:
>531_bases ATGAAAAACCTCAACTTTAGGAAGGAAATCAAGTTTTTTTCTCTGTCATTTATAATTTTATTTGTTCTATGGACTGTATT GTCTGGTTATTTTGAGCCGTTTTTTATTTTTTGTGGAGTGTTTTCCTGTATATTCACATCGTTTATCTTTAGAAGGTTGA TAAACGCTGAAAGAGCTCTTAGCCAGATTTTAAATAGTACGAGTAGACTGTCGTTTTATAAGTTAGTAAGTTATATACCA TGGTTAATGTACCAAATCATTTTATCAAGTGTTTATGTAACAAAAAAGGTGCTACAACTCAAATCTAAGCTTGAACCGAT TATTATCCTAAGAAAATGCAAAGGGCATAATGACGAAAGCATTGCGTTATTTGCCAATTCAGTCACAATCACTCCCGGAA CTTTAACTATCAATGTTGAAAGTAAGCAGAAAACATATTTCTCTACCATGTATTTGATAGATAAAGATCTTGAAAGCGGC ATTTCTGAAATAGAAAATAAAATCTTAAAAATACTACGTTCAGTTAAGTAA
Upstream 100 bases:
>100_bases AGATATAACTTAGTTGTTATATCTTTTAACATAGAAGTCAAGAACCTAAATATTCGTTATTATCTTTCCTTAAAGAGTCA TTTAAGTTATATTACAGACT
Downstream 100 bases:
>100_bases TTGCTTTAAATAAGTTAACAGCATCCTTATATTCCCTTACAAGACTTTCAAGCATTTCTTTTGGAAGGCTATTGTTAACA ATAGAACATAAATAATTATA
Product: putative monovalent cation/H+ antiporter subunit E
Products: NA
Alternate protein names: Monovalent Cation/H+ Antiporter Subunit E; Cation Antiporter; Monovalent Cation/H+ Antiporter
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKNLNFRKEIKFFSLSFIILFVLWTVLSGYFEPFFIFCGVFSCIFTSFIFRRLINAERALSQILNSTSRLSFYKLVSYIP WLMYQIILSSVYVTKKVLQLKSKLEPIIILRKCKGHNDESIALFANSVTITPGTLTINVESKQKTYFSTMYLIDKDLESG ISEIENKILKILRSVK
Sequences:
>Translated_176_residues MKNLNFRKEIKFFSLSFIILFVLWTVLSGYFEPFFIFCGVFSCIFTSFIFRRLINAERALSQILNSTSRLSFYKLVSYIP WLMYQIILSSVYVTKKVLQLKSKLEPIIILRKCKGHNDESIALFANSVTITPGTLTINVESKQKTYFSTMYLIDKDLESG ISEIENKILKILRSVK >Mature_176_residues MKNLNFRKEIKFFSLSFIILFVLWTVLSGYFEPFFIFCGVFSCIFTSFIFRRLINAERALSQILNSTSRLSFYKLVSYIP WLMYQIILSSVYVTKKVLQLKSKLEPIIILRKCKGHNDESIALFANSVTITPGTLTINVESKQKTYFSTMYLIDKDLESG ISEIENKILKILRSVK
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20486; Mature: 20486
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLNFRKEIKFFSLSFIILFVLWTVLSGYFEPFFIFCGVFSCIFTSFIFRRLINAERAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQILNSTSRLSFYKLVSYIPWLMYQIILSSVYVTKKVLQLKSKLEPIIILRKCKGHNDES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCE IALFANSVTITPGTLTINVESKQKTYFSTMYLIDKDLESGISEIENKILKILRSVK EEEEECCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNLNFRKEIKFFSLSFIILFVLWTVLSGYFEPFFIFCGVFSCIFTSFIFRRLINAERAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQILNSTSRLSFYKLVSYIPWLMYQIILSSVYVTKKVLQLKSKLEPIIILRKCKGHNDES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCE IALFANSVTITPGTLTINVESKQKTYFSTMYLIDKDLESGISEIENKILKILRSVK EEEEECCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA