| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630325
Identifier: 225630325
GI number: 225630325
Start: 587349
End: 587684
Strand: Reverse
Name: 225630325
Synonym: WRi_005480
Alternate gene names: NA
Gene position: 587684-587349 (Counterclockwise)
Preceding gene: 225630326
Following gene: 225630324
Centisome position: 40.65
GC content: 36.01
Gene sequence:
>336_bases ATGAAGGGTATGGATGGTAAAACAGGAAAAGCGTTAGAAGGAATAGAGCACTTAAAGCAATCAATAATTGATATACTTAC GACTCCTATAGGATCACGAATTATGATGAGGAATTACGGGTCTAGGCTATTTGAATTATTGGATAAGCCAGTTAATCGTG ATTTAACACTAGAAATTTACGCAGCAACTGCAGAAGCTTTGGAAAAATGGGAAAAAAGGTTTAAATTAGAAAAAGTAAAA ATGACAGAAGTAAAAGAGGGAAAAGTAACGCTTGACCTGGAAGGGTTGTACGTACCAATGGGGAAAAAGATTCGCTTCGA TGAGGTTGTAGTATAA
Upstream 100 bases:
>100_bases CAGTGTTTGCAAATGGTCATGGTGTAGGAAGAGTAGGGGATTCAGTATCTTGTGGGTTAAAAGTAATAAAAGGCAGTAAA AGCGTCTTTGCAAAATAGAA
Downstream 100 bases:
>100_bases AGATGCAGCAGACTAACATTATTGAGCCACTGAACTTCGAAGAAATCTTTTCACGTATGAAAGAAGAATTAATAAGTCGA GATGAAAGTTTTACGGCATT
Product: baseplate assembly protein W, putative
Products: NA
Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Bacteriophage P2 Baseplate Assembly Protein GPW; Bacteriophage Baseplate Assembly Protein W; Phage Baseplate Assembly Protein W; Phage P2 Baseplate Assembly GpW-Like Protein; Phage Baseplate Assembly; GpW/GP25 Family Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly W Protein; Phage-Related Baseplate Protein; Phage Protein Gp; Baseplate Assembly Protein; Prophage Baseplate Protein; Baseplate Assembly Protein W Prophage; Prophage LambdaW1 Baseplate Assembly Protein W
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKGMDGKTGKALEGIEHLKQSIIDILTTPIGSRIMMRNYGSRLFELLDKPVNRDLTLEIYAATAEALEKWEKRFKLEKVK MTEVKEGKVTLDLEGLYVPMGKKIRFDEVVV
Sequences:
>Translated_111_residues MKGMDGKTGKALEGIEHLKQSIIDILTTPIGSRIMMRNYGSRLFELLDKPVNRDLTLEIYAATAEALEKWEKRFKLEKVK MTEVKEGKVTLDLEGLYVPMGKKIRFDEVVV >Mature_111_residues MKGMDGKTGKALEGIEHLKQSIIDILTTPIGSRIMMRNYGSRLFELLDKPVNRDLTLEIYAATAEALEKWEKRFKLEKVK MTEVKEGKVTLDLEGLYVPMGKKIRFDEVVV
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12686; Mature: 12686
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMDGKTGKALEGIEHLKQSIIDILTTPIGSRIMMRNYGSRLFELLDKPVNRDLTLEIY CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEH AATAEALEKWEKRFKLEKVKMTEVKEGKVTLDLEGLYVPMGKKIRFDEVVV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCEECCCCCCC >Mature Secondary Structure MKGMDGKTGKALEGIEHLKQSIIDILTTPIGSRIMMRNYGSRLFELLDKPVNRDLTLEIY CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEH AATAEALEKWEKRFKLEKVKMTEVKEGKVTLDLEGLYVPMGKKIRFDEVVV HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA