Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630324

Identifier: 225630324

GI number: 225630324

Start: 586555

End: 587346

Strand: Reverse

Name: 225630324

Synonym: WRi_005470

Alternate gene names: NA

Gene position: 587346-586555 (Counterclockwise)

Preceding gene: 225630325

Following gene: 225630323

Centisome position: 40.62

GC content: 34.97

Gene sequence:

>792_bases
ATGCAGCAGACTAACATTATTGAGCCACTGAACTTCGAAGAAATCTTTTCACGTATGAAAGAAGAATTAATAAGTCGAGA
TGAAAGTTTTACGGCATTAGTAGAAAGTGACTCAGCGATGAAGGTATTAGAAGTAGCAGCCTGGAGAGAGCTTTTGCTGA
GACAAAGGATAAACGAAGCAGTAAAGAGTAATTTACTTAAGTTTGCGACAGGAGAAGATCTTGATAATTTAGCTGAATTT
TATGGAGTGGAGAGGCAGAAAGAAGAAGATGACGAACGTTTTAGAAAAATAATTAAAGCAAAGATAATAGGCTGGAGCAC
GGGAGGAAGTAAAGAACACTATCGATATCATGCACTGTCAGCAGATAGTAGAGTAAAGGATGCATTAGTAGAATCACCTA
TACCAGGGAAAGTACAAGTTTCAATCTTATCCACAGAATTATCCACACTGCAAGAAGAATTACTAGAAATTGTCAAAAAT
CAGCTAAACAGGGAGGATGTGAGGATTTTAACAGATACAGTTGAAGTGGTAAGTTGCAATATGATAGAAATAGATATCCA
CAGTAAAATTAGCATTAAAAGACCAGATATTATTGAAACGGTGAAGAAGAAATTTATCGAAAAATTTGGAACAACGAAAA
GATTAGGATGGAAGGTAACAAGATCATGGATAATAGCCAATTTGTTTATGGAAGGAGTAGAAAACGTGGAATTAATAGAG
CCAAGAGAAGACATAGTTGTGAAAGGAAATGAGTGCGCTTTCTTAAAAAGTTTAAATGTTGAGTTAAATTAA

Upstream 100 bases:

>100_bases
AAATGACAGAAGTAAAAGAGGGAAAAGTAACGCTTGACCTGGAAGGGTTGTACGTACCAATGGGGAAAAAGATTCGCTTC
GATGAGGTTGTAGTATAAAG

Downstream 100 bases:

>100_bases
TGCTATTACCGCCAAACGCAACAAAAAAGGAAAAAGCGCTGGTTGATGCAATAGATTACAAAGTAGATCCTGGTTGTATC
AGAGGGTTTAAATTTAGCCA

Product: baseplate assembly protein J, putative

Products: NA

Alternate protein names: Baseplate Assembly Protein J; Phage Baseplate Assembly Protein; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Bacteriophage Baseplate Assembly Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEAVKSNLLKFATGEDLDNLAEF
YGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALSADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKN
QLNREDVRILTDTVEVVSCNMIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE
PREDIVVKGNECAFLKSLNVELN

Sequences:

>Translated_263_residues
MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEAVKSNLLKFATGEDLDNLAEF
YGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALSADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKN
QLNREDVRILTDTVEVVSCNMIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE
PREDIVVKGNECAFLKSLNVELN
>Mature_263_residues
MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEAVKSNLLKFATGEDLDNLAEF
YGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALSADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKN
QLNREDVRILTDTVEVVSCNMIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE
PREDIVVKGNECAFLKSLNVELN

Specific function: Unknown

COG id: COG3948

COG function: function code R; Phage-related baseplate assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30284; Mature: 30284

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VKSNLLKFATGEDLDNLAEFYGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALS
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEC
ADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKNQLNREDVRILTDTVEVVSCN
CCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
MIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE
EEEEEECCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PREDIVVKGNECAFLKSLNVELN
CCCCEEEECCCEEEEEECCCCCC
>Mature Secondary Structure
MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEA
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VKSNLLKFATGEDLDNLAEFYGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALS
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEC
ADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKNQLNREDVRILTDTVEVVSCN
CCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
MIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE
EEEEEECCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PREDIVVKGNECAFLKSLNVELN
CCCCEEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA