| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630324
Identifier: 225630324
GI number: 225630324
Start: 586555
End: 587346
Strand: Reverse
Name: 225630324
Synonym: WRi_005470
Alternate gene names: NA
Gene position: 587346-586555 (Counterclockwise)
Preceding gene: 225630325
Following gene: 225630323
Centisome position: 40.62
GC content: 34.97
Gene sequence:
>792_bases ATGCAGCAGACTAACATTATTGAGCCACTGAACTTCGAAGAAATCTTTTCACGTATGAAAGAAGAATTAATAAGTCGAGA TGAAAGTTTTACGGCATTAGTAGAAAGTGACTCAGCGATGAAGGTATTAGAAGTAGCAGCCTGGAGAGAGCTTTTGCTGA GACAAAGGATAAACGAAGCAGTAAAGAGTAATTTACTTAAGTTTGCGACAGGAGAAGATCTTGATAATTTAGCTGAATTT TATGGAGTGGAGAGGCAGAAAGAAGAAGATGACGAACGTTTTAGAAAAATAATTAAAGCAAAGATAATAGGCTGGAGCAC GGGAGGAAGTAAAGAACACTATCGATATCATGCACTGTCAGCAGATAGTAGAGTAAAGGATGCATTAGTAGAATCACCTA TACCAGGGAAAGTACAAGTTTCAATCTTATCCACAGAATTATCCACACTGCAAGAAGAATTACTAGAAATTGTCAAAAAT CAGCTAAACAGGGAGGATGTGAGGATTTTAACAGATACAGTTGAAGTGGTAAGTTGCAATATGATAGAAATAGATATCCA CAGTAAAATTAGCATTAAAAGACCAGATATTATTGAAACGGTGAAGAAGAAATTTATCGAAAAATTTGGAACAACGAAAA GATTAGGATGGAAGGTAACAAGATCATGGATAATAGCCAATTTGTTTATGGAAGGAGTAGAAAACGTGGAATTAATAGAG CCAAGAGAAGACATAGTTGTGAAAGGAAATGAGTGCGCTTTCTTAAAAAGTTTAAATGTTGAGTTAAATTAA
Upstream 100 bases:
>100_bases AAATGACAGAAGTAAAAGAGGGAAAAGTAACGCTTGACCTGGAAGGGTTGTACGTACCAATGGGGAAAAAGATTCGCTTC GATGAGGTTGTAGTATAAAG
Downstream 100 bases:
>100_bases TGCTATTACCGCCAAACGCAACAAAAAAGGAAAAAGCGCTGGTTGATGCAATAGATTACAAAGTAGATCCTGGTTGTATC AGAGGGTTTAAATTTAGCCA
Product: baseplate assembly protein J, putative
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Phage Baseplate Assembly Protein; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Bacteriophage Baseplate Assembly Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEAVKSNLLKFATGEDLDNLAEF YGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALSADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKN QLNREDVRILTDTVEVVSCNMIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE PREDIVVKGNECAFLKSLNVELN
Sequences:
>Translated_263_residues MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEAVKSNLLKFATGEDLDNLAEF YGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALSADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKN QLNREDVRILTDTVEVVSCNMIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE PREDIVVKGNECAFLKSLNVELN >Mature_263_residues MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEAVKSNLLKFATGEDLDNLAEF YGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALSADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKN QLNREDVRILTDTVEVVSCNMIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE PREDIVVKGNECAFLKSLNVELN
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30284; Mature: 30284
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH VKSNLLKFATGEDLDNLAEFYGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALS HHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEC ADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKNQLNREDVRILTDTVEVVSCN CCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC MIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE EEEEEECCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEC PREDIVVKGNECAFLKSLNVELN CCCCEEEECCCEEEEEECCCCCC >Mature Secondary Structure MQQTNIIEPLNFEEIFSRMKEELISRDESFTALVESDSAMKVLEVAAWRELLLRQRINEA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH VKSNLLKFATGEDLDNLAEFYGVERQKEEDDERFRKIIKAKIIGWSTGGSKEHYRYHALS HHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEC ADSRVKDALVESPIPGKVQVSILSTELSTLQEELLEIVKNQLNREDVRILTDTVEVVSCN CCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC MIEIDIHSKISIKRPDIIETVKKKFIEKFGTTKRLGWKVTRSWIIANLFMEGVENVELIE EEEEEECCEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEC PREDIVVKGNECAFLKSLNVELN CCCCEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA