| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630251
Identifier: 225630251
GI number: 225630251
Start: 503725
End: 505020
Strand: Reverse
Name: 225630251
Synonym: WRi_004650
Alternate gene names: NA
Gene position: 505020-503725 (Counterclockwise)
Preceding gene: 225630253
Following gene: 225630250
Centisome position: 34.93
GC content: 34.8
Gene sequence:
>1296_bases ATGTTTTATCTTACAAATTTTTTGCCTATTTTACTGTTCCTCTTTCTTTTTGTAGGAAGTGGTATATATTTTACTATTCT TGGCGTGTCAAATGCTTTTTATCAGTTATCTCCACTGGTAGCCATTGTTCCTGCCATAGCTCTGGGTTGGGTTTTATACA AGGGCAATACTGAAGAAAAAATGTATGCCTTTCTAGATGGGGTAAGAGATCGTAATATTATCACTATGTGCATCATTTTT TTACTTGCAGGTGCATTCAGTGAAGTAACTAAAGCAATCGGTAGTGCTGATGCCACAGTTAATTTGGCTCTTTCATTTAT ACCAACACAATTTTTACTCATAGGATTATTTTTTGTAGCAGCTTTCATCTCCACTGCTATTGGTACATCAATGGGCACCA TTGCAACAATTGCTCCTATTGCAGTTGAACTGACACAAGCTGGGATTTCTCCTTCCTTAGGAGTTGCAACTGTTGTAGGA GGAGCAATGTTTGGCGACAATTTATCTATTATCTCTGATACTACAATTGCATCTGTGATGTCTCAAAAGGCTGATATAAA GAAAAAATTAAAACTGAATGCAAAAGTGGCACTAATTGCTTCTATATTCACAATAATTATATTATTTTATAGCTCAAGCA ATAGTGCTGCTATTTCAGTTAAGGAGTATTCTTTATTGCTTGTGGCTCCTTACATCATACTTATATTGCTTGCAAACTTT GGAATCAATGTATTTACGGCATTGGTTTTAAGCATAACTTTTGCTGGAATCATTGGATTTATAAATAACAACAATTATGG GTTATTGTTTTTAAGCCAAAACATCACCAAAGGGTTTATGAGTATGCATGAAATTATGCTACTGTCATTGATGGTTGGCG GACTTTCAGGACTGGTAGGTAAAAATTCTAAGGAGTTTGCAGATAAACTTTCATCTTGGGTTATGATACAACGTGGTGGA CAAAAAACTGCGCAGTTATTTATTGCAAAAATAGTCAGTATATTTGATATTTTACTTGCAAATAACACCATCGCTATAAT TTTTAGTGGTGAAATTGCTAGAGATATTGCTAAGAAATATGAAATACCGCCTCACTATAGTGCAGCATGGCTAGGCATAT TTTCTTGTGTATTTCAAGGATTAATACCGTATGGCGCTCAATTGCTTTTGGCTAGCACTATTGCTGGAGTTTCACCTTTG GCAGTCGTGCCACACGTATACTATTGCTATGTTTTAGGTATTATTGCAGTGTTATATATTGTATTGAACAAAATTGAGAA AAAAGATTGTGCTTAA
Upstream 100 bases:
>100_bases GGTAGATTGCTTTCTAGAAAAACATTGGTCAAGATGCTAACTGTGGTTTATAATAATATAAATTATATCATAGTTGATTT GCATTTATCAGAGCTGAGGT
Downstream 100 bases:
>100_bases TATACAAGACAACGCTCCGCTCTGTAGAAAATGGATGTTCTTAGCAGTATGTGCCCTTGCTTGCTCTGGGTTACTGTCAA TAATTGTTATTTTTCTACGA
Product: Na+/H+ antiporter family protein
Products: NA
Alternate protein names: Na+/H+ Antiporter; Na+/H+ Antiporter Family Protein; Na+/H+ Antiporter Family; Methionine Transporter NhaC Family; Na+/H+ Antiporter NhaC-Like Protein; Methionine Transporter MetT; NA+/H+ Antiporter NHAC; Na+ Antiporter NhaC; Na+/H+ Antiporter NHAC; Na+ H+ Antiporter; Na(+)/H(+) Antiporter Family Protein; Na+H+ Antiporter NhaC Family; Malate-H+/Na+-Lactate Antiporter; Transporter Nhac Family; Malate-2H(+)/Na(+)-Lactate Antiporter RBAM; Cation Antiporter; NhaC SodiumHydrogen Antiporter Family Sodium Transporter
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MFYLTNFLPILLFLFLFVGSGIYFTILGVSNAFYQLSPLVAIVPAIALGWVLYKGNTEEKMYAFLDGVRDRNIITMCIIF LLAGAFSEVTKAIGSADATVNLALSFIPTQFLLIGLFFVAAFISTAIGTSMGTIATIAPIAVELTQAGISPSLGVATVVG GAMFGDNLSIISDTTIASVMSQKADIKKKLKLNAKVALIASIFTIIILFYSSSNSAAISVKEYSLLLVAPYIILILLANF GINVFTALVLSITFAGIIGFINNNNYGLLFLSQNITKGFMSMHEIMLLSLMVGGLSGLVGKNSKEFADKLSSWVMIQRGG QKTAQLFIAKIVSIFDILLANNTIAIIFSGEIARDIAKKYEIPPHYSAAWLGIFSCVFQGLIPYGAQLLLASTIAGVSPL AVVPHVYYCYVLGIIAVLYIVLNKIEKKDCA
Sequences:
>Translated_431_residues MFYLTNFLPILLFLFLFVGSGIYFTILGVSNAFYQLSPLVAIVPAIALGWVLYKGNTEEKMYAFLDGVRDRNIITMCIIF LLAGAFSEVTKAIGSADATVNLALSFIPTQFLLIGLFFVAAFISTAIGTSMGTIATIAPIAVELTQAGISPSLGVATVVG GAMFGDNLSIISDTTIASVMSQKADIKKKLKLNAKVALIASIFTIIILFYSSSNSAAISVKEYSLLLVAPYIILILLANF GINVFTALVLSITFAGIIGFINNNNYGLLFLSQNITKGFMSMHEIMLLSLMVGGLSGLVGKNSKEFADKLSSWVMIQRGG QKTAQLFIAKIVSIFDILLANNTIAIIFSGEIARDIAKKYEIPPHYSAAWLGIFSCVFQGLIPYGAQLLLASTIAGVSPL AVVPHVYYCYVLGIIAVLYIVLNKIEKKDCA >Mature_431_residues MFYLTNFLPILLFLFLFVGSGIYFTILGVSNAFYQLSPLVAIVPAIALGWVLYKGNTEEKMYAFLDGVRDRNIITMCIIF LLAGAFSEVTKAIGSADATVNLALSFIPTQFLLIGLFFVAAFISTAIGTSMGTIATIAPIAVELTQAGISPSLGVATVVG GAMFGDNLSIISDTTIASVMSQKADIKKKLKLNAKVALIASIFTIIILFYSSSNSAAISVKEYSLLLVAPYIILILLANF GINVFTALVLSITFAGIIGFINNNNYGLLFLSQNITKGFMSMHEIMLLSLMVGGLSGLVGKNSKEFADKLSSWVMIQRGG QKTAQLFIAKIVSIFDILLANNTIAIIFSGEIARDIAKKYEIPPHYSAAWLGIFSCVFQGLIPYGAQLLLASTIAGVSPL AVVPHVYYCYVLGIIAVLYIVLNKIEKKDCA
Specific function: Unknown
COG id: COG1757
COG function: function code C; Na+/H+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46302; Mature: 46302
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYLTNFLPILLFLFLFVGSGIYFTILGVSNAFYQLSPLVAIVPAIALGWVLYKGNTEEK CCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCHHH MYAFLDGVRDRNIITMCIIFLLAGAFSEVTKAIGSADATVNLALSFIPTQFLLIGLFFVA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AFISTAIGTSMGTIATIAPIAVELTQAGISPSLGVATVVGGAMFGDNLSIISDTTIASVM HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHH SQKADIKKKLKLNAKVALIASIFTIIILFYSSSNSAAISVKEYSLLLVAPYIILILLANF HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC GINVFTALVLSITFAGIIGFINNNNYGLLFLSQNITKGFMSMHEIMLLSLMVGGLSGLVG CHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC KNSKEFADKLSSWVMIQRGGQKTAQLFIAKIVSIFDILLANNTIAIIFSGEIARDIAKKY CCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC EIPPHYSAAWLGIFSCVFQGLIPYGAQLLLASTIAGVSPLAVVPHVYYCYVLGIIAVLYI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VLNKIEKKDCA HHHHHHHCCCC >Mature Secondary Structure MFYLTNFLPILLFLFLFVGSGIYFTILGVSNAFYQLSPLVAIVPAIALGWVLYKGNTEEK CCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCHHH MYAFLDGVRDRNIITMCIIFLLAGAFSEVTKAIGSADATVNLALSFIPTQFLLIGLFFVA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AFISTAIGTSMGTIATIAPIAVELTQAGISPSLGVATVVGGAMFGDNLSIISDTTIASVM HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHH SQKADIKKKLKLNAKVALIASIFTIIILFYSSSNSAAISVKEYSLLLVAPYIILILLANF HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC GINVFTALVLSITFAGIIGFINNNNYGLLFLSQNITKGFMSMHEIMLLSLMVGGLSGLVG CHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC KNSKEFADKLSSWVMIQRGGQKTAQLFIAKIVSIFDILLANNTIAIIFSGEIARDIAKKY CCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC EIPPHYSAAWLGIFSCVFQGLIPYGAQLLLASTIAGVSPLAVVPHVYYCYVLGIIAVLYI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VLNKIEKKDCA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA