Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 225630235

GI number: 225630235

Start: 477900

End: 478730

Strand: Reverse

Name: ydiA [C]

Synonym: WRi_004470

Alternate gene names: 225630235

Gene position: 478730-477900 (Counterclockwise)

Preceding gene: 225630241

Following gene: 225630234

Centisome position: 33.11

GC content: 31.53

Gene sequence:

>831_bases
ATGACCCTTAAAAAGCTTAATCTACACTTAGTATCAGATTCAAGTGGTGAAACTGTTATATCAGTTGCAAAATCAGCTCT
GAAACACTTTCGTTCTGTAGAAACGATCGAATATGTTTGGTCTTTTGTAAAAGGAGAAGAGCAGATTGACAAAATTCTGG
AGGAAATTAATAGGAAAAGTGATGAGCATAATTTTGTTATATGCACTATTACTGATGATGAGCTAAGAAAATATCTAAAA
GATAACTGTATAAAGTTGAAAATTCCCTATAGAGCAATATTATCACATATTATTAGAGAAATTTCGTCTTATCTTGAAAT
TGAAAAAGACGAAAAGCTTGACTTGCATACTGAGATAAATAACGAATATTTTCAGCGCATTGAGGCAATAAACTACACTA
TTAATCATGATGATGGACAAAATATTCAAGATATTGATAAAGCAGATATAATTTTGGTTGGAGTTTCACGTACATCAAAA
TCTCCCACCAGTACGTATTTAGCTTACCGAGGCTATAAGGTTGCAAATATTCCTTTTGTTAGTGGGGTACCCTTTTATGT
CGACTTGGCAAAATTAAAAAATAAACTGACAATAGGGGTAACAATAGACGTAAGTAGGCTAATAGAAATACGCAAAAATA
GACTTACTTCAATTAACAACGAAGATAATAATATATATGCTAACCCTGAGAAAGTAGAAAAGGAAATTAAAGAAGCAGAG
GAGCTCTTTAAACAGAATAACTGGCCAATTATCGATGTCACGCAAAAGTCGATCGAAGAAGTATCAGCAACAATTATACA
ATATTTTAATAAAATGTTATCAATTGACTAA

Upstream 100 bases:

>100_bases
TTAGTTTGAGTTTTATCAACAGGATAGTTTTTCTATATTTACGTAGGTCAACAAATTAGCATAATTTCAGTAGCAGATTG
CTAGCTATTATTTTTAGTAT

Downstream 100 bases:

>100_bases
CTCTTGATAAGTGATTATAATGTAAAGTAATTTAATTCTTACTATAGATATGAAAGTCAAAGGGTCGCTAAAATCTCATC
GTAACAGAGATAAAAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTLKKLNLHLVSDSSGETVISVAKSALKHFRSVETIEYVWSFVKGEEQIDKILEEINRKSDEHNFVICTITDDELRKYLK
DNCIKLKIPYRAILSHIIREISSYLEIEKDEKLDLHTEINNEYFQRIEAINYTINHDDGQNIQDIDKADIILVGVSRTSK
SPTSTYLAYRGYKVANIPFVSGVPFYVDLAKLKNKLTIGVTIDVSRLIEIRKNRLTSINNEDNNIYANPEKVEKEIKEAE
ELFKQNNWPIIDVTQKSIEEVSATIIQYFNKMLSID

Sequences:

>Translated_276_residues
MTLKKLNLHLVSDSSGETVISVAKSALKHFRSVETIEYVWSFVKGEEQIDKILEEINRKSDEHNFVICTITDDELRKYLK
DNCIKLKIPYRAILSHIIREISSYLEIEKDEKLDLHTEINNEYFQRIEAINYTINHDDGQNIQDIDKADIILVGVSRTSK
SPTSTYLAYRGYKVANIPFVSGVPFYVDLAKLKNKLTIGVTIDVSRLIEIRKNRLTSINNEDNNIYANPEKVEKEIKEAE
ELFKQNNWPIIDVTQKSIEEVSATIIQYFNKMLSID
>Mature_275_residues
TLKKLNLHLVSDSSGETVISVAKSALKHFRSVETIEYVWSFVKGEEQIDKILEEINRKSDEHNFVICTITDDELRKYLKD
NCIKLKIPYRAILSHIIREISSYLEIEKDEKLDLHTEINNEYFQRIEAINYTINHDDGQNIQDIDKADIILVGVSRTSKS
PTSTYLAYRGYKVANIPFVSGVPFYVDLAKLKNKLTIGVTIDVSRLIEIRKNRLTSINNEDNNIYANPEKVEKEIKEAEE
LFKQNNWPIIDVTQKSIEEVSATIIQYFNKMLSID

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=151, Percent_Identity=39.7350993377483, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y341_WOLPM (Q73I41)

Other databases:

- EMBL:   AE017196
- RefSeq:   NP_966137.1
- EnsemblBacteria:   EBWOLT00000004304
- GeneID:   2738474
- GenomeReviews:   AE017196_GR
- KEGG:   wol:WD0341
- TIGR:   WD_0341
- GeneTree:   EBGT00050000030866
- HOGENOM:   HBG304855
- OMA:   AMEFAVM
- PhylomeDB:   Q73I41
- ProtClustDB:   PRK05339
- BioCyc:   WPIP955:WD_0341-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 31933; Mature: 31802

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKLNLHLVSDSSGETVISVAKSALKHFRSVETIEYVWSFVKGEEQIDKILEEINRKS
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
DEHNFVICTITDDELRKYLKDNCIKLKIPYRAILSHIIREISSYLEIEKDEKLDLHTEIN
CCCCEEEEEECHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCC
NEYFQRIEAINYTINHDDGQNIQDIDKADIILVGVSRTSKSPTSTYLAYRGYKVANIPFV
HHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCEEEECCCEE
SGVPFYVDLAKLKNKLTIGVTIDVSRLIEIRKNRLTSINNEDNNIYANPEKVEKEIKEAE
CCCCCEEEHHHHCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHH
ELFKQNNWPIIDVTQKSIEEVSATIIQYFNKMLSID
HHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLKKLNLHLVSDSSGETVISVAKSALKHFRSVETIEYVWSFVKGEEQIDKILEEINRKS
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
DEHNFVICTITDDELRKYLKDNCIKLKIPYRAILSHIIREISSYLEIEKDEKLDLHTEIN
CCCCEEEEEECHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCC
NEYFQRIEAINYTINHDDGQNIQDIDKADIILVGVSRTSKSPTSTYLAYRGYKVANIPFV
HHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHEEEECCEEEECCCEE
SGVPFYVDLAKLKNKLTIGVTIDVSRLIEIRKNRLTSINNEDNNIYANPEKVEKEIKEAE
CCCCCEEEHHHHCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHH
ELFKQNNWPIIDVTQKSIEEVSATIIQYFNKMLSID
HHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA