| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630241
Identifier: 225630241
GI number: 225630241
Start: 485593
End: 488265
Strand: Reverse
Name: 225630241
Synonym: WRi_004540
Alternate gene names: NA
Gene position: 488265-485593 (Counterclockwise)
Preceding gene: 225630242
Following gene: 225630235
Centisome position: 33.77
GC content: 36.06
Gene sequence:
>2673_bases ATGGGCACTAACGATACACAACAAGAACACATTTATAATGAGCGCATTCAAGAAATTTTTCCTTTATTTGATAAAATAAA AAAGGAAGACGACCCAATTTATAATGCTAGAGTTGATTTTAACACAGTAAAGTTTTTAACAAAACACGCCAACTGGAATT GGGACGAAGAAGAAAACAAAGATAAAGCATATGGAGTTATTCTTCAGAAATGCGACAAGACAAAGAAAGCTGGACAAGAG CTTGAAAGTGAAGTTAAAGAAAGGTTGAAAGAGTATGTTGATGATGTTGCAGGAGTTTCAATATACGGTAATCACGCAAG TATTACGCTGGGAGATAACAAAAAAGAGTTTAAAATTAGCGAATTTTTAAATAGTGATTTTTGTGAGAAGAATGAAATCT CGGGATTTTCAACATTGCATAGTGATGGAAAGAGCGGAATGCATGGTTTTGTTGCCGAGGAAGAAGGGAAAAAAATAAGA CATTATGTCGTAACTGATGGTTCATATGAAATGACTTTAAAGTGGTATGCGGAGGGGAAAGAATGTAAGATCAAAATTAA GATTGATGCTAACGGTGTAGACCTTGTTAAAGGTGATGATTTTTCTCTAGAACGGTTAGAAGTAAACAGAGATGTAAAAA TAGGTGGTTTATTCTTGCATGAAATAGAATTCAGGGAAAAAGGAAAAGTGAATGAGGTGCAACATAATAAAGACAGTAAC GAGCTATCATCTGAAACTACAACAAGAATTGATGTTAATAGAGATGTTAGCGTTCAAGCTACTGATATAACTCGAAAAAA AGAAGATCACCATTCACATTTTGGACCACAATCTAACAGCAGAGGGCAGTCTTACGATAGCGGAATTGGAAAAGATTTTG ACGATAAAATTAATTCTCAGGAGGCTAAAGAAAAGCGTGAGCTTAGACAAGCAGCACGAGAAGCAAATTCGGGAGGTCAA GTTTATAACCTACAATCGCTTTTTGAGGAGAATCCTCAGAACAAAAAAACTCCTCCGCCACTTCCACCTAGAACTAGTTC ACTACCACCTAAAAAAGGTGTTTTCGATGAGCAAGGGGGAGCCAAATCTGGAAGCCAAAAACCAGATGACTTGCGCGAAA ATGAGCAAACACCTAATAATCAGCAAAAAGGTGCAACTTCTGATTCTTCAGATAGTTCTACTTTCACCAAGTCTGTAAGC CACAATCAAGATAATAGGCAAGAAGATGAACGGTATGACAATCCTACATTTGGACATGCTGTACCTGGAAGCCAAAAACC AGATAGAAGTGAGCAAACACCTAATGATCAGCAACAACCTAAAACCCAGCAACAAGAAGGAAATAGCAAAGGCGATCTGT TACAAGACATCAGAAATTTCAAGAAAAACAACTTACGGCACATTGATGTTGATGATAGAAAAGCATCAATTGCAGGAAGT AGAAAAAATAACCCATCACCGTTAGAGACATTAAAGGACAGAATTCCTTATTCATCTTCTCCAGATAACAGTGATAACCA AGATGCTAGTGATGCTAAGTGGAAAGAAAGTGAACAGCCGCTCTCTGCTACAGCACTCAATAATAAAAGTGACTCGGGCT ATTCATCTCCAACTCATGACAATAATGAACAATCTCAAGTAAATCCTGAACAGTTAAAGAAGAGCTTAGAGAACATTGAA CAAAGTGATCAAACTCCACCTGAAAATCTTCTTAAAGAAATCAGAGATAGATCACAGCAGGATAATAGAGGATTAAGGCA AGTTGATCCTACTGATAAACTGTCACAAGATAAAGAAGATGGATTGCAAAAAGACGATTTAGCAGATGTAAAAATAGTGG AAGGTCCAACTGTTAGTGTCTCTGCTTCAACACCAAATAGTATAAGTGATTCAGGCTATATATCTCCAACTAATAGTGAT AGTAAATCTCAAACAGATTTAAAACAGGTAGGAAGGAAATTAGAAGAACATATTAGACAAAGTAATCTAACTCTATTTGA AGAACTTAAAAATACATTAGGTCAAGAAAATCTCGGGTTAAAACCAGCTGATCAGAGTCAGATTAGCGAAGAAACTAAAA AACGCTTGAGAGAAGTTGGGTTGCTAAAAGACAGCTCAACAGACATAAAAGCAAACGATTCGGGCTATTCATCTCCAACT CATGACAATAATGAACAATCTCAAGTAAATCCTGAACAGTTAAAGAAGAGCTTAGAAAACATTGAACCAAAAGAAATCGG AGATACGAGTGAGTTAAAAGGAGCATTGGGAAACCCGGATAAAGGGTTAAGAGAACCGGCACAACAGGCTACTAAAGAAA ATATTCCTAAAGATTCATTCTCAGAAAACATTTTAGAAAAGATAGGAGAAGGTAAACAATATGACCCTATACGTAAGTGG TTAGAAAAAACAGTGGCAGAACGAGAAAATAATGACACTAATCCAACTGTAGATCAAAATAGCGAACTATATAAATTACT AGAGAAAGATGAAGCACAACTGAAAGCTGGAGTAATAGAAGAAGAAAGAGGAGATACTTTAACAGAACACACTGATGGTT ATGATCGCAATAGAATTGCATTAGCTAACAGAAATAAAAGACCACTAGATTGGGCTAAACAGGTTGCTGAGTCACAACAA AAAAAAGATACTAATAAAGGTATTTCAATATAA
Upstream 100 bases:
>100_bases AACACAACCTTCCTTAATAAAAATTCAACCAATGCTTGTGATAATTATATTAGCTAGTATTAGCTAGAACTAAAGGCAGA GGGTTATTAGTGAGGGATAT
Downstream 100 bases:
>100_bases ATTGAAGTTAAAATAATTGCTTAGCAAACAATAGGTTTCATGTAATGGTAACCCTATAACGGAAGAGTAGGAGCCGCGTA AGAACAATACGAACACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 890; Mature: 889
Protein sequence:
>890_residues MGTNDTQQEHIYNERIQEIFPLFDKIKKEDDPIYNARVDFNTVKFLTKHANWNWDEEENKDKAYGVILQKCDKTKKAGQE LESEVKERLKEYVDDVAGVSIYGNHASITLGDNKKEFKISEFLNSDFCEKNEISGFSTLHSDGKSGMHGFVAEEEGKKIR HYVVTDGSYEMTLKWYAEGKECKIKIKIDANGVDLVKGDDFSLERLEVNRDVKIGGLFLHEIEFREKGKVNEVQHNKDSN ELSSETTTRIDVNRDVSVQATDITRKKEDHHSHFGPQSNSRGQSYDSGIGKDFDDKINSQEAKEKRELRQAAREANSGGQ VYNLQSLFEENPQNKKTPPPLPPRTSSLPPKKGVFDEQGGAKSGSQKPDDLRENEQTPNNQQKGATSDSSDSSTFTKSVS HNQDNRQEDERYDNPTFGHAVPGSQKPDRSEQTPNDQQQPKTQQQEGNSKGDLLQDIRNFKKNNLRHIDVDDRKASIAGS RKNNPSPLETLKDRIPYSSSPDNSDNQDASDAKWKESEQPLSATALNNKSDSGYSSPTHDNNEQSQVNPEQLKKSLENIE QSDQTPPENLLKEIRDRSQQDNRGLRQVDPTDKLSQDKEDGLQKDDLADVKIVEGPTVSVSASTPNSISDSGYISPTNSD SKSQTDLKQVGRKLEEHIRQSNLTLFEELKNTLGQENLGLKPADQSQISEETKKRLREVGLLKDSSTDIKANDSGYSSPT HDNNEQSQVNPEQLKKSLENIEPKEIGDTSELKGALGNPDKGLREPAQQATKENIPKDSFSENILEKIGEGKQYDPIRKW LEKTVAERENNDTNPTVDQNSELYKLLEKDEAQLKAGVIEEERGDTLTEHTDGYDRNRIALANRNKRPLDWAKQVAESQQ KKDTNKGISI
Sequences:
>Translated_890_residues MGTNDTQQEHIYNERIQEIFPLFDKIKKEDDPIYNARVDFNTVKFLTKHANWNWDEEENKDKAYGVILQKCDKTKKAGQE LESEVKERLKEYVDDVAGVSIYGNHASITLGDNKKEFKISEFLNSDFCEKNEISGFSTLHSDGKSGMHGFVAEEEGKKIR HYVVTDGSYEMTLKWYAEGKECKIKIKIDANGVDLVKGDDFSLERLEVNRDVKIGGLFLHEIEFREKGKVNEVQHNKDSN ELSSETTTRIDVNRDVSVQATDITRKKEDHHSHFGPQSNSRGQSYDSGIGKDFDDKINSQEAKEKRELRQAAREANSGGQ VYNLQSLFEENPQNKKTPPPLPPRTSSLPPKKGVFDEQGGAKSGSQKPDDLRENEQTPNNQQKGATSDSSDSSTFTKSVS HNQDNRQEDERYDNPTFGHAVPGSQKPDRSEQTPNDQQQPKTQQQEGNSKGDLLQDIRNFKKNNLRHIDVDDRKASIAGS RKNNPSPLETLKDRIPYSSSPDNSDNQDASDAKWKESEQPLSATALNNKSDSGYSSPTHDNNEQSQVNPEQLKKSLENIE QSDQTPPENLLKEIRDRSQQDNRGLRQVDPTDKLSQDKEDGLQKDDLADVKIVEGPTVSVSASTPNSISDSGYISPTNSD SKSQTDLKQVGRKLEEHIRQSNLTLFEELKNTLGQENLGLKPADQSQISEETKKRLREVGLLKDSSTDIKANDSGYSSPT HDNNEQSQVNPEQLKKSLENIEPKEIGDTSELKGALGNPDKGLREPAQQATKENIPKDSFSENILEKIGEGKQYDPIRKW LEKTVAERENNDTNPTVDQNSELYKLLEKDEAQLKAGVIEEERGDTLTEHTDGYDRNRIALANRNKRPLDWAKQVAESQQ KKDTNKGISI >Mature_889_residues GTNDTQQEHIYNERIQEIFPLFDKIKKEDDPIYNARVDFNTVKFLTKHANWNWDEEENKDKAYGVILQKCDKTKKAGQEL ESEVKERLKEYVDDVAGVSIYGNHASITLGDNKKEFKISEFLNSDFCEKNEISGFSTLHSDGKSGMHGFVAEEEGKKIRH YVVTDGSYEMTLKWYAEGKECKIKIKIDANGVDLVKGDDFSLERLEVNRDVKIGGLFLHEIEFREKGKVNEVQHNKDSNE LSSETTTRIDVNRDVSVQATDITRKKEDHHSHFGPQSNSRGQSYDSGIGKDFDDKINSQEAKEKRELRQAAREANSGGQV YNLQSLFEENPQNKKTPPPLPPRTSSLPPKKGVFDEQGGAKSGSQKPDDLRENEQTPNNQQKGATSDSSDSSTFTKSVSH NQDNRQEDERYDNPTFGHAVPGSQKPDRSEQTPNDQQQPKTQQQEGNSKGDLLQDIRNFKKNNLRHIDVDDRKASIAGSR KNNPSPLETLKDRIPYSSSPDNSDNQDASDAKWKESEQPLSATALNNKSDSGYSSPTHDNNEQSQVNPEQLKKSLENIEQ SDQTPPENLLKEIRDRSQQDNRGLRQVDPTDKLSQDKEDGLQKDDLADVKIVEGPTVSVSASTPNSISDSGYISPTNSDS KSQTDLKQVGRKLEEHIRQSNLTLFEELKNTLGQENLGLKPADQSQISEETKKRLREVGLLKDSSTDIKANDSGYSSPTH DNNEQSQVNPEQLKKSLENIEPKEIGDTSELKGALGNPDKGLREPAQQATKENIPKDSFSENILEKIGEGKQYDPIRKWL EKTVAERENNDTNPTVDQNSELYKLLEKDEAQLKAGVIEEERGDTLTEHTDGYDRNRIALANRNKRPLDWAKQVAESQQK KDTNKGISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100312; Mature: 100181
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTNDTQQEHIYNERIQEIFPLFDKIKKEDDPIYNARVDFNTVKFLTKHANWNWDEEENK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCC DKAYGVILQKCDKTKKAGQELESEVKERLKEYVDDVAGVSIYGNHASITLGDNKKEFKIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCHHHHH EFLNSDFCEKNEISGFSTLHSDGKSGMHGFVAEEEGKKIRHYVVTDGSYEMTLKWYAEGK HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEHHCCCEEEEEEEECCCEEEEEEEEECCC ECKIKIKIDANGVDLVKGDDFSLERLEVNRDVKIGGLFLHEIEFREKGKVNEVQHNKDSN EEEEEEEECCCCEEEECCCCCCCCEEECCCCEEECEEEEEEHHHHHCCCCHHHHCCCCCH ELSSETTTRIDVNRDVSVQATDITRKKEDHHSHFGPQSNSRGQSYDSGIGKDFDDKINSQ HHHCCCCEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHCCHH EAKEKRELRQAAREANSGGQVYNLQSLFEENPQNKKTPPPLPPRTSSLPPKKGVFDEQGG HHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKSGSQKPDDLRENEQTPNNQQKGATSDSSDSSTFTKSVSHNQDNRQEDERYDNPTFGHA CCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCC VPGSQKPDRSEQTPNDQQQPKTQQQEGNSKGDLLQDIRNFKKNNLRHIDVDDRKASIAGS CCCCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCC RKNNPSPLETLKDRIPYSSSPDNSDNQDASDAKWKESEQPLSATALNNKSDSGYSSPTHD CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC NNEQSQVNPEQLKKSLENIEQSDQTPPENLLKEIRDRSQQDNRGLRQVDPTDKLSQDKED CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHH GLQKDDLADVKIVEGPTVSVSASTPNSISDSGYISPTNSDSKSQTDLKQVGRKLEEHIRQ CCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SNLTLFEELKNTLGQENLGLKPADQSQISEETKKRLREVGLLKDSSTDIKANDSGYSSPT CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HDNNEQSQVNPEQLKKSLENIEPKEIGDTSELKGALGNPDKGLREPAQQATKENIPKDSF CCCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH SENILEKIGEGKQYDPIRKWLEKTVAERENNDTNPTVDQNSELYKLLEKDEAQLKAGVIE HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH EERGDTLTEHTDGYDRNRIALANRNKRPLDWAKQVAESQQKKDTNKGISI HHCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GTNDTQQEHIYNERIQEIFPLFDKIKKEDDPIYNARVDFNTVKFLTKHANWNWDEEENK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCC DKAYGVILQKCDKTKKAGQELESEVKERLKEYVDDVAGVSIYGNHASITLGDNKKEFKIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCHHHHH EFLNSDFCEKNEISGFSTLHSDGKSGMHGFVAEEEGKKIRHYVVTDGSYEMTLKWYAEGK HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEHHCCCEEEEEEEECCCEEEEEEEEECCC ECKIKIKIDANGVDLVKGDDFSLERLEVNRDVKIGGLFLHEIEFREKGKVNEVQHNKDSN EEEEEEEECCCCEEEECCCCCCCCEEECCCCEEECEEEEEEHHHHHCCCCHHHHCCCCCH ELSSETTTRIDVNRDVSVQATDITRKKEDHHSHFGPQSNSRGQSYDSGIGKDFDDKINSQ HHHCCCCEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHCCHH EAKEKRELRQAAREANSGGQVYNLQSLFEENPQNKKTPPPLPPRTSSLPPKKGVFDEQGG HHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKSGSQKPDDLRENEQTPNNQQKGATSDSSDSSTFTKSVSHNQDNRQEDERYDNPTFGHA CCCCCCCCHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCC VPGSQKPDRSEQTPNDQQQPKTQQQEGNSKGDLLQDIRNFKKNNLRHIDVDDRKASIAGS CCCCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHCCC RKNNPSPLETLKDRIPYSSSPDNSDNQDASDAKWKESEQPLSATALNNKSDSGYSSPTHD CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC NNEQSQVNPEQLKKSLENIEQSDQTPPENLLKEIRDRSQQDNRGLRQVDPTDKLSQDKED CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHH GLQKDDLADVKIVEGPTVSVSASTPNSISDSGYISPTNSDSKSQTDLKQVGRKLEEHIRQ CCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SNLTLFEELKNTLGQENLGLKPADQSQISEETKKRLREVGLLKDSSTDIKANDSGYSSPT CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HDNNEQSQVNPEQLKKSLENIEPKEIGDTSELKGALGNPDKGLREPAQQATKENIPKDSF CCCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHH SENILEKIGEGKQYDPIRKWLEKTVAERENNDTNPTVDQNSELYKLLEKDEAQLKAGVIE HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH EERGDTLTEHTDGYDRNRIALANRNKRPLDWAKQVAESQQKKDTNKGISI HHCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA