| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is gmk [H]
Identifier: 225630124
GI number: 225630124
Start: 325763
End: 326368
Strand: Direct
Name: gmk [H]
Synonym: WRi_003060
Alternate gene names: 225630124
Gene position: 325763-326368 (Clockwise)
Preceding gene: 225630123
Following gene: 225630125
Centisome position: 22.53
GC content: 35.97
Gene sequence:
>606_bases ATGACCGTAAAAAGTGAGGGCGTATTATTGGTTCTATCCTCCCCTTCTGGAGCTGGAAAAACTACTATATCAGCAAAATT ACTTGAGCGATCAACTAATTTAGTTAGGTCTGTTTCTATGACTACGCGCAAGCCTCGCCCCGGCGAAATAAATGGAAAAG ACTATTTTTTCGTTACCGAAGAAAAATTTCACGAGTTATGCAAAGCTGGCCAAATGCTTGAATACGCCAAAGTTTTTGAG AATTTTTATGGTATACCAAGAAATTTTATAGAGCAAAACTTAAGCAATGGAATAAGCGTTTTACTCAGCATAGACTGGCA AGGAGCATTTCACTTATTCAAGCTCATGAGAAAAAAAGTTGTAAGTGTTTTTATACTTCCCCCTTCAATGGAAGAGCTTA GGTTGCGTTTGCAAAAGCGTAATAGTGATGATGCAAGCGAAATAGAGCGCAGATTAGCCGAAGCTCAAAAAGAGATAAGC AAACGTGATAAATATGATTATGTAATAATCAATGATGATATTGATAAAAGTGTAGAAGAGATAAGCTCCATACTAAATAA AGAAAGACTTAAAAAACTAAAAGAAAAACCAAGTCTGGAAGACTGA
Upstream 100 bases:
>100_bases TCTTCTCTCATTGGCACCAACTTATCAAATTCTAATTTAGAAGGTTCTAGCTTTTTAAACTCTGATCCAAAAAGCACCAT GTTAAAAAATGCAAAGAAAA
Downstream 100 bases:
>100_bases TAAAAACATCAATTTGGATATTTGCAGCTATAGTTTCTTATCCTATTTTAGCCAGTAGCACGTTTCGCAGTTTAGCTATA TTTATTATTTTTTAAGATTA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MTVKSEGVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHELCKAGQMLEYAKVFE NFYGIPRNFIEQNLSNGISVLLSIDWQGAFHLFKLMRKKVVSVFILPPSMEELRLRLQKRNSDDASEIERRLAEAQKEIS KRDKYDYVIINDDIDKSVEEISSILNKERLKKLKEKPSLED
Sequences:
>Translated_201_residues MTVKSEGVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHELCKAGQMLEYAKVFE NFYGIPRNFIEQNLSNGISVLLSIDWQGAFHLFKLMRKKVVSVFILPPSMEELRLRLQKRNSDDASEIERRLAEAQKEIS KRDKYDYVIINDDIDKSVEEISSILNKERLKKLKEKPSLED >Mature_200_residues TVKSEGVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHELCKAGQMLEYAKVFEN FYGIPRNFIEQNLSNGISVLLSIDWQGAFHLFKLMRKKVVSVFILPPSMEELRLRLQKRNSDDASEIERRLAEAQKEISK RDKYDYVIINDDIDKSVEEISSILNKERLKKLKEKPSLED
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=183, Percent_Identity=36.6120218579235, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI4504221, Length=183, Percent_Identity=36.6120218579235, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI226874831, Length=183, Percent_Identity=36.6120218579235, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI38570142, Length=184, Percent_Identity=29.3478260869565, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI21361598, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=194, Percent_Identity=43.298969072165, Blast_Score=170, Evalue=8e-44, Organism=Caenorhabditis elegans, GI193203132, Length=181, Percent_Identity=33.1491712707182, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17508835, Length=181, Percent_Identity=33.1491712707182, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71988041, Length=180, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17557440, Length=182, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988048, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=183, Percent_Identity=37.1584699453552, Blast_Score=124, Evalue=8e-30, Organism=Drosophila melanogaster, GI21356141, Length=194, Percent_Identity=31.4432989690722, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI161077626, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45554481, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640542, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45554489, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI85724806, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007136, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 23075; Mature: 22944
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKSEGVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTE CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECH EKFHELCKAGQMLEYAKVFENFYGIPRNFIEQNLSNGISVLLSIDWQGAFHLFKLMRKKV HHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHH VSVFILPPSMEELRLRLQKRNSDDASEIERRLAEAQKEISKRDKYDYVIINDDIDKSVEE HEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH ISSILNKERLKKLKEKPSLED HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVKSEGVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTE CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECH EKFHELCKAGQMLEYAKVFENFYGIPRNFIEQNLSNGISVLLSIDWQGAFHLFKLMRKKV HHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHH VSVFILPPSMEELRLRLQKRNSDDASEIERRLAEAQKEISKRDKYDYVIINDDIDKSVEE HEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH ISSILNKERLKKLKEKPSLED HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA