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The map label for this gene is yrdA [H]

Identifier: 225630103

GI number: 225630103

Start: 297075

End: 297590

Strand: Reverse

Name: yrdA [H]

Synonym: WRi_002830

Alternate gene names: 225630103

Gene position: 297590-297075 (Counterclockwise)

Preceding gene: 225630107

Following gene: 225630101

Centisome position: 20.58

GC content: 39.92

Gene sequence:

>516_bases
ATGTATCACATTTTAAAATATAAAGATTATGAACCAAAAATAGACGAAAGTGCTTTCATCGCAGGTGGTTCGCATATCAT
AGGCAAGGTTGAAATAGGAAGAGATGCAAGCATCTGGTTTAATTGTGTAATCAGAGGGGACGTTGGATCAATAAAAATAG
GTAATGGAACAAATATTCAAGATGGAACGGTAATTCATGTGGATAGAAACCCAGGTGGTGACACAATTATTGGCAGCATG
GTAACAGTGGGACATTTTTGTGTGTTGCACGCATGCACGGTGCATGATAAGGCGTTTATTGGTATGGGCTCTACCGTGAT
GGACCATGCAGTTGTGGAGCCTGAAGCTATGGTAGCTGCTGGCTCACTGGTAACACACGGAAAAGTGATAAAAAGTGGGG
AAATATGGGCTGGCAGGCCAGCAAAATTCTTCAAAAAAATGTCGAATGAAGAAATTAAACATATCGCGCAGTCGGCACAA
AATTATATTATGTTAATGAAGGAATACAAAAACTGA

Upstream 100 bases:

>100_bases
TAAGTCAAGAACATCTGTCACCCAAATAACTTGAAATCTAAGTATGTATTTACTGCTTACCTTATTTTGATTAACATATG
CATAAGACTTTGGGCTTAAT

Downstream 100 bases:

>100_bases
AGTTCGCGTCAAGTGTTTTACTTGACACGTACGTCTCAGCTCAACAAACTGTGTTAAGCTGCCTTGTTTTTCCCCCACTT
ACTCCTTGCACTTCCGCTCC

Product: hexapeptide transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MYHILKYKDYEPKIDESAFIAGGSHIIGKVEIGRDASIWFNCVIRGDVGSIKIGNGTNIQDGTVIHVDRNPGGDTIIGSM
VTVGHFCVLHACTVHDKAFIGMGSTVMDHAVVEPEAMVAAGSLVTHGKVIKSGEIWAGRPAKFFKKMSNEEIKHIAQSAQ
NYIMLMKEYKN

Sequences:

>Translated_171_residues
MYHILKYKDYEPKIDESAFIAGGSHIIGKVEIGRDASIWFNCVIRGDVGSIKIGNGTNIQDGTVIHVDRNPGGDTIIGSM
VTVGHFCVLHACTVHDKAFIGMGSTVMDHAVVEPEAMVAAGSLVTHGKVIKSGEIWAGRPAKFFKKMSNEEIKHIAQSAQ
NYIMLMKEYKN
>Mature_171_residues
MYHILKYKDYEPKIDESAFIAGGSHIIGKVEIGRDASIWFNCVIRGDVGSIKIGNGTNIQDGTVIHVDRNPGGDTIIGSM
VTVGHFCVLHACTVHDKAFIGMGSTVMDHAVVEPEAMVAAGSLVTHGKVIKSGEIWAGRPAKFFKKMSNEEIKHIAQSAQ
NYIMLMKEYKN

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=41.7142857142857, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1787667, Length=160, Percent_Identity=31.25, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI87081681, Length=151, Percent_Identity=33.112582781457, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18661; Mature: 18661

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHILKYKDYEPKIDESAFIAGGSHIIGKVEIGRDASIWFNCVIRGDVGSIKIGNGTNIQ
CEEEEECCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCC
DGTVIHVDRNPGGDTIIGSMVTVGHFCVLHACTVHDKAFIGMGSTVMDHAVVEPEAMVAA
CCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCHHHEEE
GSLVTHGKVIKSGEIWAGRPAKFFKKMSNEEIKHIAQSAQNYIMLMKEYKN
CCEEECCEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHEEHEEECCC
>Mature Secondary Structure
MYHILKYKDYEPKIDESAFIAGGSHIIGKVEIGRDASIWFNCVIRGDVGSIKIGNGTNIQ
CEEEEECCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCCC
DGTVIHVDRNPGGDTIIGSMVTVGHFCVLHACTVHDKAFIGMGSTVMDHAVVEPEAMVAA
CCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCHHHEEE
GSLVTHGKVIKSGEIWAGRPAKFFKKMSNEEIKHIAQSAQNYIMLMKEYKN
CCEEECCEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]