Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630107

Identifier: 225630107

GI number: 225630107

Start: 300164

End: 301423

Strand: Reverse

Name: 225630107

Synonym: WRi_002870

Alternate gene names: NA

Gene position: 301423-300164 (Counterclockwise)

Preceding gene: 225630108

Following gene: 225630103

Centisome position: 20.85

GC content: 35.08

Gene sequence:

>1260_bases
ATGTTTTCGCTTGGTATGGGAGCTGCAGCCACGTTTACTCTAATTAAAATGTCTCCGCTAGTGTTAGTAATAGTAGCTGT
GACCTTCTTTTTGACTGCAATAGCATCTATGTCTCTGTTTGTATTATATAAAAAAGTAAAAGGGGAACGCAAACACGAGG
TAATTGTTAATAATGCTGTATTTAACATAAGTCTAGAAGAAGCAGCTAATGATTTGTTTAGCGGGTTATCAACTATAGCA
GAAAGAGGAGCAGAAGCAGGTGCACTATACCTGGAAGTAAAGGAAAAGACTGAAAGTGTAGCTAAAAAAATGACATCCAA
AAAGGAATTAATTGAAGCAAGATTTCAAAATATACAAGAAAATTTCATTAATAAGTTAAGTAATTTTGAAGAACTTCAAG
GTGCCAGAGATTCTAGTACTTTAAAGAAATTCTATGCTGCTGTTAAAGATGTTCTAAAGATACGCTCCAGCATCCCTATT
TCCAATTTACATCTATTATCGCTTGTTTACCATTTATCATTGGAAGTATCATATGCTATTTTTCAGGCAATAACTGATCC
AATTCTTGGAAGTACAATTTTAACTGCCATAAGTGAAAGAAAATTGCCTGAAGATAAGCAGTGGGCTAAGGTATTAAAAA
ATACAGTACCAAACTTAATAAGAAATCAAGAAGTTGTGCGGAATGTTATAGTACCAACTCTTACTGATATTTTAAAGAGC
CTATCAGAATCAAGAGAAGAAAGAAAATTTATAATCTATACTCTGGTCTGCCTGAAAGAAGTGATTGATGAAGTTTATAC
GACATCGGTACAAGAGTCATTGTATAGGATATTAGGAGTAGAACTTGCAAATAGTCTAAATGGTATGGTACAGGCAATAA
GTAACCTATTAGGCTGCTATGGACACAAAGAAGTAGAACGTGCAAGAACCGCAAATGAGTTAGATTACAGAGTAGGTAAA
CTTACACCTGAAGAAACGCAGCAATTCGTTATAAACTTAGGAGAGAGAGTAGGATCTCTCAGGGAGTTTGAGGGTCGAGT
TACAAATAAACAGTCAATTAGTAAATTGATAGATTATTGTTTGGACCCAAAACTGAATGATAGGGAAGCAGCCGCAACAC
TATTAAATTATATACTCACATGTACTGAAGATGGTCGTTATTTGGCCGCTGAAGCTGGTACTAATAATAATTTATCTAGC
AACTCTAATGTTGTACTTATTACGCACGTGGCAGCAAATCGATCTGCACAGTTAGACTAG

Upstream 100 bases:

>100_bases
TTCTTTACGAAACAGAGCAGACATTCCAAATAACGCAAACATTTCAAATAATAAGAAAAACTGTAAGTTGTATTTCCAAG
TAGCGGTTGGATGTGTAGCG

Downstream 100 bases:

>100_bases
AGGCGGCTATATGGAAAAAAGTGAAGATAGTTTCAGAGATAAGCAAGCAAATGACAATTGATAGACTTAAACTATGTTCT
CAATTTCTCAAAAAAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAVFNISLEEAANDLFSGLSTIA
ERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQENFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPI
SNLHLLSLVYHLSLEVSYAIFQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS
LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCYGHKEVERARTANELDYRVGK
LTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYCLDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSS
NSNVVLITHVAANRSAQLD

Sequences:

>Translated_419_residues
MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAVFNISLEEAANDLFSGLSTIA
ERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQENFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPI
SNLHLLSLVYHLSLEVSYAIFQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS
LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCYGHKEVERARTANELDYRVGK
LTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYCLDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSS
NSNVVLITHVAANRSAQLD
>Mature_419_residues
MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAVFNISLEEAANDLFSGLSTIA
ERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQENFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPI
SNLHLLSLVYHLSLEVSYAIFQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS
LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCYGHKEVERARTANELDYRVGK
LTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYCLDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSS
NSNVVLITHVAANRSAQLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46637; Mature: 46637

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCE
FNISLEEAANDLFSGLSTIAERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQE
EEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPISNLHLLSLVYHLSLEVSYAI
HHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHKEVERARTANELDYRVGKLTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYC
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSSNSNVVLITHVAANRSAQLD
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MFSLGMGAAATFTLIKMSPLVLVIVAVTFFLTAIASMSLFVLYKKVKGERKHEVIVNNAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCE
FNISLEEAANDLFSGLSTIAERGAEAGALYLEVKEKTESVAKKMTSKKELIEARFQNIQE
EEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFINKLSNFEELQGARDSSTLKKFYAAVKDVLKIRSSIPISNLHLLSLVYHLSLEVSYAI
HHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FQAITDPILGSTILTAISERKLPEDKQWAKVLKNTVPNLIRNQEVVRNVIVPTLTDILKS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSESREERKFIIYTLVCLKEVIDEVYTTSVQESLYRILGVELANSLNGMVQAISNLLGCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHKEVERARTANELDYRVGKLTPEETQQFVINLGERVGSLREFEGRVTNKQSISKLIDYC
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LDPKLNDREAAATLLNYILTCTEDGRYLAAEAGTNNNLSSNSNVVLITHVAANRSAQLD
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA