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The map label for this gene is 225630071

Identifier: 225630071

GI number: 225630071

Start: 255500

End: 257002

Strand: Reverse

Name: 225630071

Synonym: WRi_002460

Alternate gene names: NA

Gene position: 257002-255500 (Counterclockwise)

Preceding gene: 225630072

Following gene: 225630068

Centisome position: 17.77

GC content: 32.73

Gene sequence:

>1503_bases
TTGTATGCTGTTCTAATGGCTATTTTTAAATGCTTAATACTCCTCTTCATTATTTCTTGCACACATCTACCTACCAAGCA
ATATCCTATTAACATAGACAATTATAAGCACGATTATCCGTTGCAACAATATAACACCTCTTTGGAGATTAATGAACCGG
CAATACCAGAAATTATGCCTTTACCAATAGAGTTTCCCGATCTCACAATCAGTAATCAGCTTATTTCTATTAATGTTAGT
GAAGAAGTATCAGTAAAGGATTTGCTGATTGAGATAGGAAAACTTTCTGACGTTAACTTGGATATGGACCCAAAAATATC
AGGTAATATTATTTTAAAGCTAAAAGATAAGGATATAAACGAAGTAATTCAGAGTATAGCAAATAGCGCCAAACTGCGTT
ACTCAACAAGTAATGGTGTAATTAGAATTGAGCAGGACTTGCCATACGCACAAAATTATTACGTAGACTTCATCAATATT
CAACATTCTGCTCAAAGCAGTTTCGTCATTAATAACAATATTACTAACAGTGATGGAAGTAACGTTGATAGGGACTATAA
CAATGTTATGAAGTCTCAATACAGTAGTGACTTATGGAATTCATTAGAAAAAGGCTTGAATGCAATAATGGATGTTAACG
GGGTGGATGATGGCGAATTCCTCTCATCCAACAGAGAAGCTGGTGTTATTATTTTGAATGCTAGAAAAGATATCCACAAA
GCTGTTGAAGAATATATTAATAAGGTTAAGAAGTTAGCGTCTTCTCAAGTAATGATAGAGGCAAAAATAGTTGAAGTTGT
GCTAGATGACAAATACCTTTCTGGTATGAACTTAAATGACTTACGCGATGGAACTAAGTCTATAATAAATCAAGATAACT
CCATTATTAACCTAGCAATGAACTTTGGTGCGAATGATCTAGGAGATTTAGTAAAAAATTTAGACAAATTTGGCACTTCA
ACTGTAATTTCAAGCCCCAGAGTACATGCTATAAATAATCAGCAAGCGATGATTTCATTTACTAAAAACCATATTTATTT
TACTTCCGATATACAAAAAGATACTAGAAACTCTAATCAGACCTTAATTACCAAGATGAATAGCGTTCCAATAGGTATTG
TGCTAATAATCCACCCAAGCATTAACATTGATACTAGTGAAATATTCATGGATATACATCCAACTTTATCAAGAATTAAC
GGCTACGTTAAAGATCCAGATATAGAGTACGTCGCACAGCAGAGTAAAATGAAATTAAATAGCGACATTCCAATTGTTGA
AATCAGAGAAATGAACTCTATGTTAAAAATTAAGAGCGGTGAAATTATGGTAATCGGCGGGCTTATAGAACATAGAGAAG
ATAAGCAAAGCTTATTGCACCAGAAGTCAAAAAGGCTAGCGAATAATATTAGAACAGTAGAAACTGTCATTTTTTTAAAA
GCAACAATCGTACCAACATTTGGTTTGTTAGATAGAAAAGATAAGAATTTATATATATATTAA

Upstream 100 bases:

>100_bases
TTTCCAAAATCTCCTATCTATTGTTTCTTAAACCACTCTCCTGAACGGATACGATTAAATACATTTTTAATATTTTTATA
GAAATCTATTAGTATAGATT

Downstream 100 bases:

>100_bases
ATTATCACTAAAAATTAAATATCAAACCAATTTCAATATTGTGAGTAGATATGTCATCTGCAACAGGTATCGGAACGCTA
AAGTAACGATAGCCGAGAAA

Product: type II secretion system protein, putative

Products: NA

Alternate protein names: Pilus Biogenesis Protein MshL; MSHA Biogenesis Protein MshL; General Secretion Pathway Protein D; Mannose-Sensitive Agglutinin; Type II Secretion System Protein; General Secretory Pathway Protein D; Msha Biogenesis Protein Mshl; Type II Secretory Pathway; Type II Protein Secretion Protein; Type II Protein Secretion Protein-Like Protein; Pilus Biogenesis Protein Mshl; Type II Secretory Pathway Subunit PulD; PP Family ATPase; Type II Protein Secretion System D Protein; Type II Protein Secretion System D Protein CtsD; MSHA Type Biogenesis Protein MshL; Type II And Iii Secretion System Protein; Type II And III Secretion System ProteinSecretin; Type II Secretory Pathway Component PulD-Like; Type II Secretory Pathway Component PulD; Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MYAVLMAIFKCLILLFIISCTHLPTKQYPINIDNYKHDYPLQQYNTSLEINEPAIPEIMPLPIEFPDLTISNQLISINVS
EEVSVKDLLIEIGKLSDVNLDMDPKISGNIILKLKDKDINEVIQSIANSAKLRYSTSNGVIRIEQDLPYAQNYYVDFINI
QHSAQSSFVINNNITNSDGSNVDRDYNNVMKSQYSSDLWNSLEKGLNAIMDVNGVDDGEFLSSNREAGVIILNARKDIHK
AVEEYINKVKKLASSQVMIEAKIVEVVLDDKYLSGMNLNDLRDGTKSIINQDNSIINLAMNFGANDLGDLVKNLDKFGTS
TVISSPRVHAINNQQAMISFTKNHIYFTSDIQKDTRNSNQTLITKMNSVPIGIVLIIHPSINIDTSEIFMDIHPTLSRIN
GYVKDPDIEYVAQQSKMKLNSDIPIVEIREMNSMLKIKSGEIMVIGGLIEHREDKQSLLHQKSKRLANNIRTVETVIFLK
ATIVPTFGLLDRKDKNLYIY

Sequences:

>Translated_500_residues
MYAVLMAIFKCLILLFIISCTHLPTKQYPINIDNYKHDYPLQQYNTSLEINEPAIPEIMPLPIEFPDLTISNQLISINVS
EEVSVKDLLIEIGKLSDVNLDMDPKISGNIILKLKDKDINEVIQSIANSAKLRYSTSNGVIRIEQDLPYAQNYYVDFINI
QHSAQSSFVINNNITNSDGSNVDRDYNNVMKSQYSSDLWNSLEKGLNAIMDVNGVDDGEFLSSNREAGVIILNARKDIHK
AVEEYINKVKKLASSQVMIEAKIVEVVLDDKYLSGMNLNDLRDGTKSIINQDNSIINLAMNFGANDLGDLVKNLDKFGTS
TVISSPRVHAINNQQAMISFTKNHIYFTSDIQKDTRNSNQTLITKMNSVPIGIVLIIHPSINIDTSEIFMDIHPTLSRIN
GYVKDPDIEYVAQQSKMKLNSDIPIVEIREMNSMLKIKSGEIMVIGGLIEHREDKQSLLHQKSKRLANNIRTVETVIFLK
ATIVPTFGLLDRKDKNLYIY
>Mature_500_residues
MYAVLMAIFKCLILLFIISCTHLPTKQYPINIDNYKHDYPLQQYNTSLEINEPAIPEIMPLPIEFPDLTISNQLISINVS
EEVSVKDLLIEIGKLSDVNLDMDPKISGNIILKLKDKDINEVIQSIANSAKLRYSTSNGVIRIEQDLPYAQNYYVDFINI
QHSAQSSFVINNNITNSDGSNVDRDYNNVMKSQYSSDLWNSLEKGLNAIMDVNGVDDGEFLSSNREAGVIILNARKDIHK
AVEEYINKVKKLASSQVMIEAKIVEVVLDDKYLSGMNLNDLRDGTKSIINQDNSIINLAMNFGANDLGDLVKNLDKFGTS
TVISSPRVHAINNQQAMISFTKNHIYFTSDIQKDTRNSNQTLITKMNSVPIGIVLIIHPSINIDTSEIFMDIHPTLSRIN
GYVKDPDIEYVAQQSKMKLNSDIPIVEIREMNSMLKIKSGEIMVIGGLIEHREDKQSLLHQKSKRLANNIRTVETVIFLK
ATIVPTFGLLDRKDKNLYIY

Specific function: Unknown

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56446; Mature: 56446

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAVLMAIFKCLILLFIISCTHLPTKQYPINIDNYKHDYPLQQYNTSLEINEPAIPEIMP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCEEE
LPIEFPDLTISNQLISINVSEEVSVKDLLIEIGKLSDVNLDMDPKISGNIILKLKDKDIN
CCCCCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHH
EVIQSIANSAKLRYSTSNGVIRIEQDLPYAQNYYVDFINIQHSAQSSFVINNNITNSDGS
HHHHHHHCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCC
NVDRDYNNVMKSQYSSDLWNSLEKGLNAIMDVNGVDDGEFLSSNREAGVIILNARKDIHK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHCCCCCCCEEEEECCHHHHH
AVEEYINKVKKLASSQVMIEAKIVEVVLDDKYLSGMNLNDLRDGTKSIINQDNSIINLAM
HHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHCCCCCEEEEEE
NFGANDLGDLVKNLDKFGTSTVISSPRVHAINNQQAMISFTKNHIYFTSDIQKDTRNSNQ
ECCCCHHHHHHHHHHHHCCCCEECCCCEEEECCCEEEEEEEECEEEEECCCCHHCCCCCC
TLITKMNSVPIGIVLIIHPSINIDTSEIFMDIHPTLSRINGYVKDPDIEYVAQQSKMKLN
EEEEEECCCCEEEEEEEECCCCCCHHHEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCC
SDIPIVEIREMNSMLKIKSGEIMVIGGLIEHREDKQSLLHQKSKRLANNIRTVETVIFLK
CCCCEEEEECCCCEEEECCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIVPTFGLLDRKDKNLYIY
HHHHCCCCCCCCCCCCEEEC
>Mature Secondary Structure
MYAVLMAIFKCLILLFIISCTHLPTKQYPINIDNYKHDYPLQQYNTSLEINEPAIPEIMP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCEEE
LPIEFPDLTISNQLISINVSEEVSVKDLLIEIGKLSDVNLDMDPKISGNIILKLKDKDIN
CCCCCCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHH
EVIQSIANSAKLRYSTSNGVIRIEQDLPYAQNYYVDFINIQHSAQSSFVINNNITNSDGS
HHHHHHHCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCCCC
NVDRDYNNVMKSQYSSDLWNSLEKGLNAIMDVNGVDDGEFLSSNREAGVIILNARKDIHK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHCCCCCCCEEEEECCHHHHH
AVEEYINKVKKLASSQVMIEAKIVEVVLDDKYLSGMNLNDLRDGTKSIINQDNSIINLAM
HHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHCCCCCEEEEEE
NFGANDLGDLVKNLDKFGTSTVISSPRVHAINNQQAMISFTKNHIYFTSDIQKDTRNSNQ
ECCCCHHHHHHHHHHHHCCCCEECCCCEEEECCCEEEEEEEECEEEEECCCCHHCCCCCC
TLITKMNSVPIGIVLIIHPSINIDTSEIFMDIHPTLSRINGYVKDPDIEYVAQQSKMKLN
EEEEEECCCCEEEEEEEECCCCCCHHHEEEECCHHHHHCCCCCCCCCHHHHHHHHHHCCC
SDIPIVEIREMNSMLKIKSGEIMVIGGLIEHREDKQSLLHQKSKRLANNIRTVETVIFLK
CCCCEEEEECCCCEEEECCCCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATIVPTFGLLDRKDKNLYIY
HHHHCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA