| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630038
Identifier: 225630038
GI number: 225630038
Start: 206626
End: 207246
Strand: Reverse
Name: 225630038
Synonym: WRi_002060
Alternate gene names: NA
Gene position: 207246-206626 (Counterclockwise)
Preceding gene: 225630041
Following gene: 225630036
Centisome position: 14.33
GC content: 34.3
Gene sequence:
>621_bases ATGCGTTTTTTCTATTCGAATTATATTCTTTTTTTGTCTTTATGTTGTTTTTTGCTTTTTTCGTTATCTTCAACAAAAGC CCAAACGAATGATACGTTAGCTGTTCCTATACCACAAAGGAAAAAAGAAATAGTTGAGCACACTGTTGTAGCACAACCGA GGCAAATTATCGAAATGCAAGAAGAAGTCATTATTAACGAGGGTAAAGAATTCATTCCAATTCCAAAAAGAAAAAAAAGT GTAGAGAAAAAACTAAGAAGGGATGTTAGAGGGGCAAAAAATGAAATAGGAAACGAAAAAAGCGTTGAGAGCAAAAAGGA TGAATTAGTTGTAACAGAAATTATTAACTCTATAAGAGAAAAGCTCACAAAATGCTGGAGCATTCCTGAAAGCATAGCTT ACAAAGAAAATTTTAATATAAAAATTAACTTATTGTTATCCAGTCAAGGCGAGATAATTATGGCGGATGTAGCAGACAGT GATTCCTATCGAAATAATCCACTTTTCAGGTCGATAGCAGATAATGCAATGCGTGCAGTATATAAATGTAGCCCATTGAC CGGCTTGCCTACTCAGCACCACCACATTTGGCGTGAAGTAACACTAGATTTTATTCTATAG
Upstream 100 bases:
>100_bases GAAGGGATTCCTTATTGACTTCAAACTCGTCCATCAACTAAAATATATTGACTTTACGTGCAATATTAGCTTTAAACCAG TAAAACAAGCTGCTTAACAT
Downstream 100 bases:
>100_bases CTAAAGTAATTCTATAATTTAATAAGCCCACTGTATCCGTTCAGGATAGCAGCAAGGTAGTATAACCATAGAGTAAAAGT GAGTTTACAACAAATGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MRFFYSNYILFLSLCCFLLFSLSSTKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKS VEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKENFNIKINLLLSSQGEIIMADVADS DSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTLDFIL
Sequences:
>Translated_206_residues MRFFYSNYILFLSLCCFLLFSLSSTKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKS VEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKENFNIKINLLLSSQGEIIMADVADS DSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTLDFIL >Mature_206_residues MRFFYSNYILFLSLCCFLLFSLSSTKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQEEVIINEGKEFIPIPKRKKS VEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIREKLTKCWSIPESIAYKENFNIKINLLLSSQGEIIMADVADS DSYRNNPLFRSIADNAMRAVYKCSPLTGLPTQHHHIWREVTLDFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23785; Mature: 23785
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFYSNYILFLSLCCFLLFSLSSTKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQ CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHH EEVIINEGKEFIPIPKRKKSVEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIRE HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH KLTKCWSIPESIAYKENFNIKINLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAV HHHHHHCCHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH YKCSPLTGLPTQHHHIWREVTLDFIL HHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRFFYSNYILFLSLCCFLLFSLSSTKAQTNDTLAVPIPQRKKEIVEHTVVAQPRQIIEMQ CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHH EEVIINEGKEFIPIPKRKKSVEKKLRRDVRGAKNEIGNEKSVESKKDELVVTEIINSIRE HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH KLTKCWSIPESIAYKENFNIKINLLLSSQGEIIMADVADSDSYRNNPLFRSIADNAMRAV HHHHHHCCHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH YKCSPLTGLPTQHHHIWREVTLDFIL HHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA