| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527202
Identifier: 222527202
GI number: 222527202
Start: 4934098
End: 4934940
Strand: Direct
Name: 222527202
Synonym: Chy400_3986
Alternate gene names: NA
Gene position: 4934098-4934940 (Clockwise)
Preceding gene: 222527201
Following gene: 222527203
Centisome position: 93.64
GC content: 63.7
Gene sequence:
>843_bases ATGGACTTTTCGGTTCTGCTCGTATATCATGACGCTATGACACGAAAAGCCTATCCCAGTGATGTTTCCGATGAGGAGTG GGCGTTTGTCGCGCCCTATTTGACGCTGATGGACGAAGCAGCACCGCAGCGGAACTACCCCCTGCGCGACGTCTCCAATG CGCTGCGCTACCTTCTGCGTACCGGTGCGCCGTGGCGGATGCTGCCCACTGACGTGCCGCCGTGGCATGTGGTGTATCAA CAGACCCAGCGCTGGCTGAAGGCGGGTGTGGTTGAGCAGATGGTGCATGATGTGCGGATGCTGCTGCGCGACATCACCGA CCGCACGCCCCAGCCTCGCGCCGTCGTTGTGGACAGCCGGACACTCCAGTCGACGCCAGAAAGCGGGGAACGTGCCGGCT ACGATGGACATAAGCGGCGCAAAGGCTCGAAGGTGCATGTGGCGGTGGCTACCCTGGGGCACCTGCTGGCGGTTGTGGTC ACGCCAGCCAATGAACAAGACCGGGCGCAGGTGGCGGCGCTGGCACAGCGCATGCAGGCGATACCTGGCGACACGGTGGA GGTGGCCTTCGTTGACCAGGGCTACACCGGTGAGCAACCGGCAGCCGATGCCGCCGCCCACGGCAGTCGCCTGGCGGTGG TCACGCTGCCGACCGCCAAGCGAGGCTTTGTCTTGCTGCCGCGGCGCTGGGTGGTCGAGCGCAGTTTCGCCTGGATGACG CGCTTCCGTCGCCTGGTGCGTGACGACGAACGTGTGGCGGAGACGCTGGCCGGCTTGCATGTCGTTGCCTTCGCCATCTT GTTGGCCCATCGGTTTGTCTCGCTCATGGTTCAACGTTCATAA
Upstream 100 bases:
>100_bases TCGCCCCATCATCCTGGAGTTGGGCCGGACGAAGACCGACCCGATCACCGAGGCGTATCTGGACAAGTTGCTCAAAGAGC TGCAAGGACTAGAGCCTGTT
Downstream 100 bases:
>100_bases CAGGCTCTAGGCGTCACCATCACACGGGATCGCATTCGCCTGGTGGATTTAGAGTGAGGGAGCAAGATGGACAAGATTAG CGTCGAGCTACGGTTCTTTC
Product: transposase IS5 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase-Like Protein; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Fragment; Transposase Protein; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Transposase Is4-Like Protein; Transposase And Inactivated Derivatives-Like
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLRTGAPWRMLPTDVPPWHVVYQ QTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSRTLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVV TPANEQDRAQVAALAQRMQAIPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS
Sequences:
>Translated_280_residues MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLRTGAPWRMLPTDVPPWHVVYQ QTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSRTLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVV TPANEQDRAQVAALAQRMQAIPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS >Mature_280_residues MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLRTGAPWRMLPTDVPPWHVVYQ QTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSRTLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVV TPANEQDRAQVAALAQRMQAIPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31529; Mature: 31529
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLR CCEEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TGAPWRMLPTDVPPWHVVYQQTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSR CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC TLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVVTPANEQDRAQVAALAQRMQA HHCCCCCCCCCCCCCCHHHCCCCEEEEHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH IPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT CCCCCEEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHH RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLR CCEEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TGAPWRMLPTDVPPWHVVYQQTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSR CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC TLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVVTPANEQDRAQVAALAQRMQA HHCCCCCCCCCCCCCCHHHCCCCEEEEHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH IPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT CCCCCEEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHH RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA