Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527201

Identifier: 222527201

GI number: 222527201

Start: 4932280

End: 4933065

Strand: Direct

Name: 222527201

Synonym: Chy400_3983

Alternate gene names: NA

Gene position: 4932280-4933065 (Clockwise)

Preceding gene: 222527200

Following gene: 222527202

Centisome position: 93.61

GC content: 63.99

Gene sequence:

>786_bases
TTGTACTATAATGCCAGCAACGACGATCCTGACATCGGGCGGTTTCTCTCCGCCGACACCATCATCCCCGCCAGCCCGCC
GCTCACCGTCTGGCCGAGCGATGCGACTGCGCAGGGGATGTGGCGCAGCGCCGGCAGCGGCCCGGTCAACCCGCAGGACC
TGAACCGCTATGCCTACGCGCTGAACAATCCGCTGCCCGCCACCGACCCGACGGGGCATCTGCCGCTGCTGCCGGTGCCC
ATCGCTGGCGGGCTGGCGCTGCTGAAGGCGATTGACGACGGCTGGACGACGTGGGATGCCGTGCAAGCCACCCACACGCT
GGCCGATCCGCAGGCGTCGGTTGAGGAGAAGCGCGCGGCGGCGGCCAATCTGGCCCTGACCGCCGCGCTGGAAGCGGCTG
AACCTGATGACCTGCTGCCGGTTGCGCTACCCCTCGATGACCTGCTTCGGGTTGGGATCATCGGGGGGAGCAAGGGGGCG
GGAAAGTCATTACCCGCTGCGTATGAGATCGCGAAGGCTGGTGGCCGTCAGGCTGGCGTTCTCAAAAACTATCTCTCACG
GCGTTCGGCAGAAATTGAGCGTGCACTACGCAGCCTGGAGCGGCAGGCCGCACTGCATCGTGACAAGCTTGCCAATCCCG
CACAGTATGCCGAAGAGTGGGAAACCATGACTGCCGAGCGACGGAAAGCTCTACTGCGTTACTGGCATAAAGAAGCTACC
AATTACGCAGAGCAAGCTGATGTGCTGCGCGGCCTGCTGATGGAACGTAGTCAAGGAGGCTCGTGA

Upstream 100 bases:

>100_bases
GTTTTGGCTACACGTGAACGGAGCACAACGCGATCTCTGTCATTAAGGAATGCCAATGGATGAGTTTCACGTGATGTCGG
CTTAAAGAGAACTGACGTTA

Downstream 100 bases:

>100_bases
ATGGATGAAAAGACCCTTATCTATTTTTTGCAGTATTTTGCAGGGCTTTTGTACGAACGAGCCTTGGAAAGTAAGGAGCG
ATGCACGGCTGCTCAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MYYNASNDDPDIGRFLSADTIIPASPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYALNNPLPATDPTGHLPLLPVP
IAGGLALLKAIDDGWTTWDAVQATHTLADPQASVEEKRAAAANLALTAALEAAEPDDLLPVALPLDDLLRVGIIGGSKGA
GKSLPAAYEIAKAGGRQAGVLKNYLSRRSAEIERALRSLERQAALHRDKLANPAQYAEEWETMTAERRKALLRYWHKEAT
NYAEQADVLRGLLMERSQGGS

Sequences:

>Translated_261_residues
MYYNASNDDPDIGRFLSADTIIPASPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYALNNPLPATDPTGHLPLLPVP
IAGGLALLKAIDDGWTTWDAVQATHTLADPQASVEEKRAAAANLALTAALEAAEPDDLLPVALPLDDLLRVGIIGGSKGA
GKSLPAAYEIAKAGGRQAGVLKNYLSRRSAEIERALRSLERQAALHRDKLANPAQYAEEWETMTAERRKALLRYWHKEAT
NYAEQADVLRGLLMERSQGGS
>Mature_261_residues
MYYNASNDDPDIGRFLSADTIIPASPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYALNNPLPATDPTGHLPLLPVP
IAGGLALLKAIDDGWTTWDAVQATHTLADPQASVEEKRAAAANLALTAALEAAEPDDLLPVALPLDDLLRVGIIGGSKGA
GKSLPAAYEIAKAGGRQAGVLKNYLSRRSAEIERALRSLERQAALHRDKLANPAQYAEEWETMTAERRKALLRYWHKEAT
NYAEQADVLRGLLMERSQGGS

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28056; Mature: 28056

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYNASNDDPDIGRFLSADTIIPASPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYA
CCCCCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
LNNPLPATDPTGHLPLLPVPIAGGLALLKAIDDGWTTWDAVQATHTLADPQASVEEKRAA
HCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AANLALTAALEAAEPDDLLPVALPLDDLLRVGIIGGSKGAGKSLPAAYEIAKAGGRQAGV
HHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHH
LKNYLSRRSAEIERALRSLERQAALHRDKLANPAQYAEEWETMTAERRKALLRYWHKEAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYAEQADVLRGLLMERSQGGS
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYYNASNDDPDIGRFLSADTIIPASPPLTVWPSDATAQGMWRSAGSGPVNPQDLNRYAYA
CCCCCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
LNNPLPATDPTGHLPLLPVPIAGGLALLKAIDDGWTTWDAVQATHTLADPQASVEEKRAA
HCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
AANLALTAALEAAEPDDLLPVALPLDDLLRVGIIGGSKGAGKSLPAAYEIAKAGGRQAGV
HHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHH
LKNYLSRRSAEIERALRSLERQAALHRDKLANPAQYAEEWETMTAERRKALLRYWHKEAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYAEQADVLRGLLMERSQGGS
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA