| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is livH [C]
Identifier: 222527142
GI number: 222527142
Start: 4872498
End: 4873973
Strand: Direct
Name: livH [C]
Synonym: Chy400_3924
Alternate gene names: 222527142
Gene position: 4872498-4873973 (Clockwise)
Preceding gene: 222527141
Following gene: 222527143
Centisome position: 92.48
GC content: 58.88
Gene sequence:
>1476_bases ATGAATGAATTTATTCGACAGCGACGAGGCTTGCTGGCCGGGATCGGTGCGACATTGATCTTTGCATACTGGGCAGTCAC CCATTACGAACCGCGTGTTCTCGCCAGTATTCTCCTCTCTGGCCTGACGCTGGGGGCACTCTACTTTTTAGTCACATCTG GCCTCTCACTGATCTTCGGCCTGATGGATGTACTCAATTTCGCCCATGGGACACTGTTTATGATCGGTGCCTATGTGGGC TTTACCCTCTACGCCAACCCGCGTTTGTTGCTGAACACTATGCCGTTTGTGCTGGCGTTTGTAGCGGGGTGGCTCCTGAC GCGCTGGTTCCCCACCAATCGAATGAAGGCACCGCGCTGGTGGTTCTGGCTTGGGGCATTCATCGTGGGCGGGCTGGCAC TTTGGGGGTTCGAGCTGGCACCGCTGGCCACCACTGCGCTCAGTTCAGGTGGGCGAGTGCCTACTGAGGAAGCGCAGGCG CCAACTGCTATCTTCATCGGACGAACGGTAGGGTTGAGCGTAGCCGGCTTCATTGCGGGGATCGCCTTTCTGATCGGAAA GGAACACTCTCGGCCACCAACGAGGGCCGATCTCGTCCTGGGGTTGAGTATGCTTGCGCTGGCATTGATCATCGCACCAT TCCGCCTCGCTGCCGAAGGCTGGCTATTGAGCATCAACGCAAACATCCGCTTTCTCCTGGCCCTGGTGATCGGGGCCGCC AGTGGCGCAGCGCTGGGTGGTCTGATGGAATGGAGCCTGATTCGCCCGCTGTACAGCCGGCCTATTTATCAGGTACTGGT CACACTGGGGCTGGTCTTTGTCGGCACCGAGCTGGTGAAAGGCATCTGGGGGCCGGGTGGCTACTTTATGGAATTGCCCG AATGGTTTAGCCGTCGCGGACCTGACTGCCCATCACCCAACCTGATCGCCTGGCTCCGCGACAACTGTGCCAGTATTGAC GTATTGGGGCGACCATTCCCCAGTTATCGCATCTTTATTATTGCCCTGGGCATTGCCATGTTTATCGGCATTGCCCTCCT CTTACGCCGCACCCGCCTGGGGATGATCATTCGGGCCGGCGTGCAGGACGGCGAAATGGTGCAGGCATTGGGGATCAACG TTCGCCGCGTCTTCACTCTGGTCTTTGCACTTGGAGCCGGCCTTGCCGCGTTGGGCGGGGTGGCAGCGGCACCATTCCTC GGTATTAGTCCTGGTTTGGGACAGGAGTTTCAGTTACAGGCCTTTATCGCCGTGGTGATCGGGGGAATGGGCAGCTTCAC CGGTGCAGCGATGGGTGCGCTGCTGGTGGGGCTGGCGCGCGCCTTTGGCGACCAGATTGTCCTGACCGGCATCCAACTAC CGTGGATGAGCGAAGCGATCACCTTCTCACCTTCAATTGCGCGCGCTTCAACAGTCTTGATCATGGCGCTGGTGCTCTTG CTGCGCCCGGCAGGTCTCTTTGGGAAGAAGGAGTAG
Upstream 100 bases:
>100_bases GGAGCTTAGCGCGTCATCTAATGCAGAGATGACGCTCGTCAGACCGTTGCAAGCGACCGGCACGATGCCGCGCCGTTATC GTGCCACAGTGAGGAGATCC
Downstream 100 bases:
>100_bases GCGATGCTGACACGTTTGAAAGCACCACAATGGGCCGGTCTGGCCTTGATCGGCGGTCTGATCGCCTTCCCCTATCTGAT AGCACTGCTCACCGGGCAGC
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid Transport Permease; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease Protein; Amino Acid/Amide ABC Transporter Membrane HAAT Family; ABC-Transporter; ABC Transporter Permease; ABC Transporteur Membrane Component; ABC-Type Transport System Permease Protein; Permease Component Of ABC Transporter Protein; Amino Acid ABC Transporter Permease; Membrane Spanning Protein; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFGLMDVLNFAHGTLFMIGAYVG FTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRWWFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQA PTAIFIGRTVGLSVAGFIAGIAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRGPDCPSPNLIAWLRDNCASID VLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFL GISPGLGQEFQLQAFIAVVIGGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL LRPAGLFGKKE
Sequences:
>Translated_491_residues MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFGLMDVLNFAHGTLFMIGAYVG FTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRWWFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQA PTAIFIGRTVGLSVAGFIAGIAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRGPDCPSPNLIAWLRDNCASID VLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFL GISPGLGQEFQLQAFIAVVIGGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL LRPAGLFGKKE >Mature_491_residues MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFGLMDVLNFAHGTLFMIGAYVG FTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRWWFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQA PTAIFIGRTVGLSVAGFIAGIAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRGPDCPSPNLIAWLRDNCASID VLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFL GISPGLGQEFQLQAFIAVVIGGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL LRPAGLFGKKE
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52613; Mature: 52613
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFG CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMDVLNFAHGTLFMIGAYVGFTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRW HHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH WFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQAPTAIFIGRTVGLSVAGFIAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEECHHHHHHHHHHHH IAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRG CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC PDCPSPNLIAWLRDNCASIDVLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAG CCCCCCCEEHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC VQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFLGISPGLGQEFQLQAFIAVVI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH GGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHH LRPAGLFGKKE HCCCCCCCCCC >Mature Secondary Structure MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFG CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMDVLNFAHGTLFMIGAYVGFTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRW HHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH WFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQAPTAIFIGRTVGLSVAGFIAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEECHHHHHHHHHHHH IAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRG CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC PDCPSPNLIAWLRDNCASIDVLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAG CCCCCCCEEHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC VQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFLGISPGLGQEFQLQAFIAVVI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH GGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHH LRPAGLFGKKE HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA