| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527051
Identifier: 222527051
GI number: 222527051
Start: 4772449
End: 4773489
Strand: Reverse
Name: 222527051
Synonym: Chy400_3830
Alternate gene names: NA
Gene position: 4773489-4772449 (Counterclockwise)
Preceding gene: 222527052
Following gene: 222527050
Centisome position: 90.6
GC content: 59.37
Gene sequence:
>1041_bases ATGACACCCCACCATCTCCTGTACCATTGGGACGAGGCGGCCATTGACACCTGGGAACGGGCAGCACCTGTATCGGCTGA TGATCCGCACGCCCGCATTGCAATGGTTAGCCCTCCACTCGTGACGCACGATGCGCTCTCGATCATTCCGAGCTGGATTG CCGATACGCCTTCGGCAAGCTGGATTGAGCTTCAGCTTCGCGTACAACAGCATGGCACCTGGAGCACCTGGTTTCGGTTG GCTGCCTGGGATAGCGACGGCACTCACCGTACCAGTTTTGCTGACCAACGACATGAGGCCGGCACTGTTGCTACCGATAC GCTGCAATTGCACACACCAGCACAGGCTGTTCAGGTGCGTGTGTTGCTCTGCGGTCTCCCCGGTGCTGATATGCCGGCAA TGAGTGAGCTGTTTCTTTGCATTACCACGACTGCGCAGCCGGTGACTGCTTCTACGCAACCATCCCTGTCGGCAATTAGT CTGCCGCTGCTACTGTGTCAGTACGATTATCCTGGCGGCGAGGGATGGTGCAGTCCCACAACCGTACAAATGGTGCTGGC ATACTGGCATGCTCAGGTGGCCGATCCGCGTCTCGCACCGTTTGCCGAACGCACGACATTACCCGATCTGACGGTGGCCG GTATCTTCGATCCAGGCTGGGATGGCACCGGCAACTGGTCATTCAATACGGCGTTTGCAGCTCAATTCGGTTTGCGGGCA TACGTGACTCGTTTCGACACCCTGGAACAGGTTAGCCGTTGGACGGCTGCCGGTGTGCCGGTGATTATAAGCGTGGCCTG GGAGCACGGTCAGGTTGATGATGCCCCCGGTCGCACCAGCGGCCATCTGACCATTGTCCGCGGTTTTACCGACACCCACG CGCTGATCGCCGAACCAGCCGGGCGCGAACGGATACTGCGCGCATATCCGCAATCCCAACTGGCAACAGCGTGGCAGGCC AATTCCGTCGGTACCGTGTATCTGATCTACCCGCCTGATTGGCCTCGTCCCGAACCCGGCCCGACTGATGCATGGGTGTG A
Upstream 100 bases:
>100_bases CTGGTCAGTGAAGCACTCTTGCCGGAGGTTACAGCTCACCCCAATCTTGAATTACTCGGCCCCGCTGAATGGGTTCTCGA TTGCGTTGAAGGATAACTTC
Downstream 100 bases:
>100_bases GATGCAGATACTTGTCCTGGCTCCATACCCGCCCTATCCGCCACGGGGTGGTGGCGCACTGCGCATCTTCCATCTGCTGC GCATCCTGGCCCAACATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTPHHLLYHWDEAAIDTWERAAPVSADDPHARIAMVSPPLVTHDALSIIPSWIADTPSASWIELQLRVQQHGTWSTWFRL AAWDSDGTHRTSFADQRHEAGTVATDTLQLHTPAQAVQVRVLLCGLPGADMPAMSELFLCITTTAQPVTASTQPSLSAIS LPLLLCQYDYPGGEGWCSPTTVQMVLAYWHAQVADPRLAPFAERTTLPDLTVAGIFDPGWDGTGNWSFNTAFAAQFGLRA YVTRFDTLEQVSRWTAAGVPVIISVAWEHGQVDDAPGRTSGHLTIVRGFTDTHALIAEPAGRERILRAYPQSQLATAWQA NSVGTVYLIYPPDWPRPEPGPTDAWV
Sequences:
>Translated_346_residues MTPHHLLYHWDEAAIDTWERAAPVSADDPHARIAMVSPPLVTHDALSIIPSWIADTPSASWIELQLRVQQHGTWSTWFRL AAWDSDGTHRTSFADQRHEAGTVATDTLQLHTPAQAVQVRVLLCGLPGADMPAMSELFLCITTTAQPVTASTQPSLSAIS LPLLLCQYDYPGGEGWCSPTTVQMVLAYWHAQVADPRLAPFAERTTLPDLTVAGIFDPGWDGTGNWSFNTAFAAQFGLRA YVTRFDTLEQVSRWTAAGVPVIISVAWEHGQVDDAPGRTSGHLTIVRGFTDTHALIAEPAGRERILRAYPQSQLATAWQA NSVGTVYLIYPPDWPRPEPGPTDAWV >Mature_345_residues TPHHLLYHWDEAAIDTWERAAPVSADDPHARIAMVSPPLVTHDALSIIPSWIADTPSASWIELQLRVQQHGTWSTWFRLA AWDSDGTHRTSFADQRHEAGTVATDTLQLHTPAQAVQVRVLLCGLPGADMPAMSELFLCITTTAQPVTASTQPSLSAISL PLLLCQYDYPGGEGWCSPTTVQMVLAYWHAQVADPRLAPFAERTTLPDLTVAGIFDPGWDGTGNWSFNTAFAAQFGLRAY VTRFDTLEQVSRWTAAGVPVIISVAWEHGQVDDAPGRTSGHLTIVRGFTDTHALIAEPAGRERILRAYPQSQLATAWQAN SVGTVYLIYPPDWPRPEPGPTDAWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37948; Mature: 37817
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHHLLYHWDEAAIDTWERAAPVSADDPHARIAMVSPPLVTHDALSIIPSWIADTPSAS CCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC WIELQLRVQQHGTWSTWFRLAAWDSDGTHRTSFADQRHEAGTVATDTLQLHTPAQAVQVR EEEEEEEEECCCCHHHEEEEEEECCCCCCCCCHHHHHHCCCCEEEEEEEECCCHHHEEEE VLLCGLPGADMPAMSELFLCITTTAQPVTASTQPSLSAISLPLLLCQYDYPGGEGWCSPT EEEECCCCCCCCHHHHEEEEEECCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCHH TVQMVLAYWHAQVADPRLAPFAERTTLPDLTVAGIFDPGWDGTGNWSFNTAFAAQFGLRA HHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH YVTRFDTLEQVSRWTAAGVPVIISVAWEHGQVDDAPGRTSGHLTIVRGFTDTHALIAEPA HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEECCC GRERILRAYPQSQLATAWQANSVGTVYLIYPPDWPRPEPGPTDAWV CHHHHHHHCCHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TPHHLLYHWDEAAIDTWERAAPVSADDPHARIAMVSPPLVTHDALSIIPSWIADTPSAS CCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC WIELQLRVQQHGTWSTWFRLAAWDSDGTHRTSFADQRHEAGTVATDTLQLHTPAQAVQVR EEEEEEEEECCCCHHHEEEEEEECCCCCCCCCHHHHHHCCCCEEEEEEEECCCHHHEEEE VLLCGLPGADMPAMSELFLCITTTAQPVTASTQPSLSAISLPLLLCQYDYPGGEGWCSPT EEEECCCCCCCCHHHHEEEEEECCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCHH TVQMVLAYWHAQVADPRLAPFAERTTLPDLTVAGIFDPGWDGTGNWSFNTAFAAQFGLRA HHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH YVTRFDTLEQVSRWTAAGVPVIISVAWEHGQVDDAPGRTSGHLTIVRGFTDTHALIAEPA HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEECCC GRERILRAYPQSQLATAWQANSVGTVYLIYPPDWPRPEPGPTDAWV CHHHHHHHCCHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA