| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527052
Identifier: 222527052
GI number: 222527052
Start: 4773494
End: 4774777
Strand: Reverse
Name: 222527052
Synonym: Chy400_3831
Alternate gene names: NA
Gene position: 4774777-4773494 (Counterclockwise)
Preceding gene: 222527053
Following gene: 222527051
Centisome position: 90.62
GC content: 58.49
Gene sequence:
>1284_bases ATGCAGATCACGCTCAACATTGAGCACATTCGGGCCGATACGCCACTTCCTCCGCTCTTTCGTGTTCGTCAGCGCTGGCA GACATCGCCCATAGCCGATGTCGCAGCAGTCGTCTATGCTGAACTCGACAAAATCGGGCTGGCCGGCCACATCCAGCCTG GTATGCGGATTGCCGTGACTGCCGGCAGTCGCGGGATTAGCAATATCGTGACGATTACAGCGGCGGCAGTGGCCTGGCTG CGTGCCCACGGTGCTGAACCCTTTATCGTGCCGGCGATGGGAAGTCACGGTGGAGCAACGGCGGAAGGTCAGGTGGCCCT CCTTGCGTCGCTCGGCATCACCGAACAGTCGGTTGGTTGCCCGATTCGGGCAACGATGGATGTGGTCGAACTGGGGCGGA TCGCCGATGGTACGCCGGTCTACATGGATCGGTTCGCAGCCGAAGCCGATGGGGTGTTGGTGATCAATCGCATCAAGACC CACACATCGTTTAAGGCCCCGATTGAGAGTGGTCTGGCGAAAATGTGTGCCGTCGGTTTGGGAAAACGCCAGGGTGCCGA GATTGTGCATCGTACTGCGGTCTACGGCCTGAAAGAGCAGTTGGTGCCGATGGCGCGGATGGTGGTTGAGCGGGGGAGAG TGCTGGCCGGGCTGGCAATCCTGGAAGATGCCCGCGATCAGACGGCGGCAATTGTGGCTCTGCCACCCGCAGAGATTGGT GGCGCCGGTGAAGCTGAGTTGCTGCTGCGCAGCAAAGAGATGATGGCCCGCTTGCCCTTCGACCGTCTGGATGTGCTGGT GGTTGATCGCATCGGTAAGAACATCAGTGGTACCGGCATGGATACGAACGTGATCGGGCGTTTGCCTATTCCCGGTGAGC CACCACCTGATCGTCCGGTGATTAATGTGATTGTGGTGCTTGATCTTACCCCCGAAACACACGGGAATGCGAATGGGATC GGCCTTGCCGACATTACGACGGCGCGTCTGGCTGCGAAGATCGATTTTCACGCCACCTATGTGAATGTGTTGACGGCTGG TTTGGTTGGTCTGTGCAAAGGTGGATTGCCGATAACCCTGCCTACCGAACGTGATGCAGTGGCGATGGCGATCAAGACGT GTGGTCAGCCTGATCTGGCGGCAGTGCGGCTGGTACGCATTCCCGACACGCTTCATCTGGAAGAGTTGCTGGTCAGTGAA GCACTCTTGCCGGAGGTTACAGCTCACCCCAATCTTGAATTACTCGGCCCCGCTGAATGGGTTCTCGATTGCGTTGAAGG ATAA
Upstream 100 bases:
>100_bases CAACCTGGGGTATGACACCAGATTTGGTATGACAACCCACTACCGGCTTATGGTACAATCCAGCATGCCGTGATAGATTA CTTCACAGCGAGGCTAGACG
Downstream 100 bases:
>100_bases CTTCATGACACCCCACCATCTCCTGTACCATTGGGACGAGGCGGCCATTGACACCTGGGAACGGGCAGCACCTGTATCGG CTGATGATCCGCACGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MQITLNIEHIRADTPLPPLFRVRQRWQTSPIADVAAVVYAELDKIGLAGHIQPGMRIAVTAGSRGISNIVTITAAAVAWL RAHGAEPFIVPAMGSHGGATAEGQVALLASLGITEQSVGCPIRATMDVVELGRIADGTPVYMDRFAAEADGVLVINRIKT HTSFKAPIESGLAKMCAVGLGKRQGAEIVHRTAVYGLKEQLVPMARMVVERGRVLAGLAILEDARDQTAAIVALPPAEIG GAGEAELLLRSKEMMARLPFDRLDVLVVDRIGKNISGTGMDTNVIGRLPIPGEPPPDRPVINVIVVLDLTPETHGNANGI GLADITTARLAAKIDFHATYVNVLTAGLVGLCKGGLPITLPTERDAVAMAIKTCGQPDLAAVRLVRIPDTLHLEELLVSE ALLPEVTAHPNLELLGPAEWVLDCVEG
Sequences:
>Translated_427_residues MQITLNIEHIRADTPLPPLFRVRQRWQTSPIADVAAVVYAELDKIGLAGHIQPGMRIAVTAGSRGISNIVTITAAAVAWL RAHGAEPFIVPAMGSHGGATAEGQVALLASLGITEQSVGCPIRATMDVVELGRIADGTPVYMDRFAAEADGVLVINRIKT HTSFKAPIESGLAKMCAVGLGKRQGAEIVHRTAVYGLKEQLVPMARMVVERGRVLAGLAILEDARDQTAAIVALPPAEIG GAGEAELLLRSKEMMARLPFDRLDVLVVDRIGKNISGTGMDTNVIGRLPIPGEPPPDRPVINVIVVLDLTPETHGNANGI GLADITTARLAAKIDFHATYVNVLTAGLVGLCKGGLPITLPTERDAVAMAIKTCGQPDLAAVRLVRIPDTLHLEELLVSE ALLPEVTAHPNLELLGPAEWVLDCVEG >Mature_427_residues MQITLNIEHIRADTPLPPLFRVRQRWQTSPIADVAAVVYAELDKIGLAGHIQPGMRIAVTAGSRGISNIVTITAAAVAWL RAHGAEPFIVPAMGSHGGATAEGQVALLASLGITEQSVGCPIRATMDVVELGRIADGTPVYMDRFAAEADGVLVINRIKT HTSFKAPIESGLAKMCAVGLGKRQGAEIVHRTAVYGLKEQLVPMARMVVERGRVLAGLAILEDARDQTAAIVALPPAEIG GAGEAELLLRSKEMMARLPFDRLDVLVVDRIGKNISGTGMDTNVIGRLPIPGEPPPDRPVINVIVVLDLTPETHGNANGI GLADITTARLAAKIDFHATYVNVLTAGLVGLCKGGLPITLPTERDAVAMAIKTCGQPDLAAVRLVRIPDTLHLEELLVSE ALLPEVTAHPNLELLGPAEWVLDCVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45113; Mature: 45113
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITLNIEHIRADTPLPPLFRVRQRWQTSPIADVAAVVYAELDKIGLAGHIQPGMRIAVT CEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCEEEEE AGSRGISNIVTITAAAVAWLRAHGAEPFIVPAMGSHGGATAEGQVALLASLGITEQSVGC ECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHCCC PIRATMDVVELGRIADGTPVYMDRFAAEADGVLVINRIKTHTSFKAPIESGLAKMCAVGL CHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC GKRQGAEIVHRTAVYGLKEQLVPMARMVVERGRVLAGLAILEDARDQTAAIVALPPAEIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCHHCC GAGEAELLLRSKEMMARLPFDRLDVLVVDRIGKNISGTGMDTNVIGRLPIPGEPPPDRPV CCCCHHHHHHHHHHHHHCCHHHHHEEEEHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCE INVIVVLDLTPETHGNANGIGLADITTARLAAKIDFHATYVNVLTAGLVGLCKGGLPITL EEEEEEEEECCCCCCCCCCEEEHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCEEEE PTERDAVAMAIKTCGQPDLAAVRLVRIPDTLHLEELLVSEALLPEVTAHPNLELLGPAEW CCCCCHHHHHHHHCCCCCHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHH VLDCVEG HHHHHCC >Mature Secondary Structure MQITLNIEHIRADTPLPPLFRVRQRWQTSPIADVAAVVYAELDKIGLAGHIQPGMRIAVT CEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCEEEEE AGSRGISNIVTITAAAVAWLRAHGAEPFIVPAMGSHGGATAEGQVALLASLGITEQSVGC ECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCHHCCC PIRATMDVVELGRIADGTPVYMDRFAAEADGVLVINRIKTHTSFKAPIESGLAKMCAVGL CHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCC GKRQGAEIVHRTAVYGLKEQLVPMARMVVERGRVLAGLAILEDARDQTAAIVALPPAEIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCHHCC GAGEAELLLRSKEMMARLPFDRLDVLVVDRIGKNISGTGMDTNVIGRLPIPGEPPPDRPV CCCCHHHHHHHHHHHHHCCHHHHHEEEEHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCE INVIVVLDLTPETHGNANGIGLADITTARLAAKIDFHATYVNVLTAGLVGLCKGGLPITL EEEEEEEEECCCCCCCCCCEEEHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCEEEE PTERDAVAMAIKTCGQPDLAAVRLVRIPDTLHLEELLVSEALLPEVTAHPNLELLGPAEW CCCCCHHHHHHHHCCCCCHHEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHH VLDCVEG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA