| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527022
Identifier: 222527022
GI number: 222527022
Start: 4732505
End: 4732978
Strand: Reverse
Name: 222527022
Synonym: Chy400_3801
Alternate gene names: NA
Gene position: 4732978-4732505 (Counterclockwise)
Preceding gene: 222527025
Following gene: 222527021
Centisome position: 89.83
GC content: 60.76
Gene sequence:
>474_bases ATGCTGAGACGATTATTGAAGCCGCGCACAATCGCGGTTGCGCTGATGGTTCTGTTTGTCGGTATGCAGGCCGTCCCGGT CTGGCTGCGCCAAACCAATCCACCGGTTGTTACCGATGTGGCCTGGACGACGCCGGAAGCGGCGAGCATTGCTCGTCGCG CCTGCTACGACTGCCACAGTAACCAGACGAACTGGCCCTGGTATAGCCGAATTGCCCCGGTCTCGTGGCTGGTGACGTAT GACGTGGTGAAAGGACGGGCAGAACTCAACTTCTCGCTCCCCCTGCGTGAGCCAGAGGAGCTGGCAGCCGAGATTGCTGA AGTGCTGCGTGAGGGTGAGATGCCGCCACGGGCGTATGTTCTGCTCCATCCAGAGGCCAATCTGACACCCCAGGAAATGG AAACCCTGATTGCCGGCACCCCCGGCGCTACCGGCCTACGTTCAGGAGAGGGGTACGGTGACGACGATGACTGA
Upstream 100 bases:
>100_bases CTTGGAAAAAGATTGGAATGTTGCGCGGCGGTTTTAAGGGTGTTTTGAAAAAGCCACTGTACTGTTGGATGCGAAGGCAC GTACTGCACACGGAGGCGTT
Downstream 100 bases:
>100_bases TTCGATGTGAGGTTCAATCTTCGAGATAAAAAAGGAGACGTTGCTATGAATCGCACCATGTTTCTGATTTCAGCCGCATT GACCGCTTTCGTACTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLRRLLKPRTIAVALMVLFVGMQAVPVWLRQTNPPVVTDVAWTTPEAASIARRACYDCHSNQTNWPWYSRIAPVSWLVTY DVVKGRAELNFSLPLREPEELAAEIAEVLREGEMPPRAYVLLHPEANLTPQEMETLIAGTPGATGLRSGEGYGDDDD
Sequences:
>Translated_157_residues MLRRLLKPRTIAVALMVLFVGMQAVPVWLRQTNPPVVTDVAWTTPEAASIARRACYDCHSNQTNWPWYSRIAPVSWLVTY DVVKGRAELNFSLPLREPEELAAEIAEVLREGEMPPRAYVLLHPEANLTPQEMETLIAGTPGATGLRSGEGYGDDDD >Mature_157_residues MLRRLLKPRTIAVALMVLFVGMQAVPVWLRQTNPPVVTDVAWTTPEAASIARRACYDCHSNQTNWPWYSRIAPVSWLVTY DVVKGRAELNFSLPLREPEELAAEIAEVLREGEMPPRAYVLLHPEANLTPQEMETLIAGTPGATGLRSGEGYGDDDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17487; Mature: 17487
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLLKPRTIAVALMVLFVGMQAVPVWLRQTNPPVVTDVAWTTPEAASIARRACYDCHS CCHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHCC NQTNWPWYSRIAPVSWLVTYDVVKGRAELNFSLPLREPEELAAEIAEVLREGEMPPRAYV CCCCCCHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE LLHPEANLTPQEMETLIAGTPGATGLRSGEGYGDDDD EECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRRLLKPRTIAVALMVLFVGMQAVPVWLRQTNPPVVTDVAWTTPEAASIARRACYDCHS CCHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHCC NQTNWPWYSRIAPVSWLVTYDVVKGRAELNFSLPLREPEELAAEIAEVLREGEMPPRAYV CCCCCCHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE LLHPEANLTPQEMETLIAGTPGATGLRSGEGYGDDDD EECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA