| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yvqK [H]
Identifier: 222526952
GI number: 222526952
Start: 4649713
End: 4650249
Strand: Reverse
Name: yvqK [H]
Synonym: Chy400_3730
Alternate gene names: 222526952
Gene position: 4650249-4649713 (Counterclockwise)
Preceding gene: 222526955
Following gene: 222526950
Centisome position: 88.26
GC content: 59.22
Gene sequence:
>537_bases ATGAAAATCTACACACGCACCGGGGATGCCGGTGAAACAGGTCTGTTTGGCGGTCAGCGGGTTCGGAAAGACGATCTGCG AGTGCAGGCGTATGGCACAGTTGACGAGTGCAACGCAGCGCTTGGTGTGGCCCGTGCAGCCGGCCCTGATCCGGCACTCG ATGCTGTACTGGCTGTTGTGCAGAATCAGCTTTTTGTGGTTGGGGCAGACCTGGCGTCACCCGGTGAGTCGCCGTACATT CCGCGCGTCTCTGCTGAGCTAACCTCGTTTCTGGAAGAGCAGATTGACGCAATGGAAGCCGAATTGTCGCCGCTGAAGCA GTTCATCTTGCCCGGTGGGCATCCGGTAGCAGCGCATCTCCATCTGGCCCGCACGATCTGCCGGCGGGCCGAACGGGTGG TGGTGACGCTGGCTACCGAGGAAGAGGTGCGGCCTGAGATTTTAACCTATCTCAATCGTCTGTCGGATTTTCTGTTCGTG GCAGCACGGATTGCGAACGCCAGGGCTGGAGTGAGTGATGTGCCCTGGCAGAAGTGA
Upstream 100 bases:
>100_bases TCTCGGTGGTGAAACATCCTCTCGCGCTATCACGCTCTCGTGTATACTACGAGTAGTATGGACAACAAGAGTGCAATACC TGGCATAAGTGAGTAACGCT
Downstream 100 bases:
>100_bases TGATGGGAGCAAGAGGGTATCTCTGCTCGCGGATCGTTGGCGTGGGTGGTAGTGGGGCGGGTTGAGAACCCGCCCCTACG GTAGCCGGGTACGCCGGGTG
Product: ATP/cobalamin adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase [H]
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKIYTRTGDAGETGLFGGQRVRKDDLRVQAYGTVDECNAALGVARAAGPDPALDAVLAVVQNQLFVVGADLASPGESPYI PRVSAELTSFLEEQIDAMEAELSPLKQFILPGGHPVAAHLHLARTICRRAERVVVTLATEEEVRPEILTYLNRLSDFLFV AARIANARAGVSDVPWQK
Sequences:
>Translated_178_residues MKIYTRTGDAGETGLFGGQRVRKDDLRVQAYGTVDECNAALGVARAAGPDPALDAVLAVVQNQLFVVGADLASPGESPYI PRVSAELTSFLEEQIDAMEAELSPLKQFILPGGHPVAAHLHLARTICRRAERVVVTLATEEEVRPEILTYLNRLSDFLFV AARIANARAGVSDVPWQK >Mature_178_residues MKIYTRTGDAGETGLFGGQRVRKDDLRVQAYGTVDECNAALGVARAAGPDPALDAVLAVVQNQLFVVGADLASPGESPYI PRVSAELTSFLEEQIDAMEAELSPLKQFILPGGHPVAAHLHLARTICRRAERVVVTLATEEEVRPEILTYLNRLSDFLFV AARIANARAGVSDVPWQK
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI16418349, Length=186, Percent_Identity=38.1720430107527, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115534154, Length=177, Percent_Identity=38.4180790960452, Blast_Score=104, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - ProDom: PD007457 [H]
Pfam domain/function: PF01923 Cob_adeno_trans [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 19238; Mature: 19238
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYTRTGDAGETGLFGGQRVRKDDLRVQAYGTVDECNAALGVARAAGPDPALDAVLAVV CEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHH QNQLFVVGADLASPGESPYIPRVSAELTSFLEEQIDAMEAELSPLKQFILPGGHPVAAHL HCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH HLARTICRRAERVVVTLATEEEVRPEILTYLNRLSDFLFVAARIANARAGVSDVPWQK HHHHHHHHHHHHEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKIYTRTGDAGETGLFGGQRVRKDDLRVQAYGTVDECNAALGVARAAGPDPALDAVLAVV CEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHH QNQLFVVGADLASPGESPYIPRVSAELTSFLEEQIDAMEAELSPLKQFILPGGHPVAAHL HCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH HLARTICRRAERVVVTLATEEEVRPEILTYLNRLSDFLFVAARIANARAGVSDVPWQK HHHHHHHHHHHHEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]