| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mnmG
Identifier: 222526950
GI number: 222526950
Start: 4645994
End: 4647949
Strand: Reverse
Name: mnmG
Synonym: Chy400_3728
Alternate gene names: 222526950
Gene position: 4647949-4645994 (Counterclockwise)
Preceding gene: 222526952
Following gene: 222526949
Centisome position: 88.21
GC content: 60.17
Gene sequence:
>1956_bases ATGCAAACACGTTACGATGTCATTGTGGTGGGTGCCGGCCACGCCGGATGTGAAGCCGCGCATGCTGCGGCCCGGTTGGG TTGCCGGACCCTGTTGTTGACTATTGATCTGGACAAGCTGGCCCATATGTCGTGTAATCCGAGCATTGGCGGGCCGGCGA AAGGCCATCTGGTGCGCGAGATCGATGCGCTGGGTGGTCTGATGGGTCGTATTACCGACCGTAGCGCAATTCAGATTCGG CTGCTCAATGAGAGTAAAGGGCCGGCGGTGCAATCGTTGCGGGCGCAGTGTGATAAGCGGCTGTACGCCCGCCTGATGAA AGAGACGCTTGAACGGGTGCCCAATCTCGATCTGCGCCAGGCGATGGTTGAACGGATCGCCCCACCGAACGCCGACACCC AATGTTTCACGGTGACGACCCACACGGGCTGGCGGTATCTGGCACCGGCAGTGATCCTGACCACCGGTACCTTTCTGCGG GGCCGGGCAATCACTGGTGAAGCGATGTGGGGTGCCGGTCGCGCCGGTGAAGCGCCGGCCATGGCGCTCAGTGAAGACCT GGCGGCACTCGGTTTTCCGCTGGTGCGCCTCAAGACGGGGACGCCACCGCGCCTTGCTGCGGCGACGATAGACTTCTCGC TGACCGAATTGCAACCCGGCAGTGACACACCGTTGTCGTTCGGCCACTACTATCCCGAACTTGGTGAAACAATTCCGCCC CCTGAATACCACGGCCCGCCAGCACCAGTCTACCCGCACCCACAGCTCGACGGCTGGCGACCGCAGTTACCCTGCTATCA GGTGCATACGACGCCCGAATTTCACGCAATCATCCGCGAAAACCTGCACCGTGCCCCCCTCTTCAGTGGGATCATTGAAG GCGTCGGGCCGCGTTATTGTCCGAGTATCGAAGATAAGATTGTGCGCTTCGCCGACAAGGAGCGGCACGGGCTGTTCCTG GAGCCGGAAGGCTGGACAACGTCAGAGGTCTATGTACAGGGGTGCAACACCTCGCTGCCTGAAGACGTACAGTGGGCAAT GCTGCGTTCGATCCCGGCGTTACGCAATGTCGAATTAATGCGGATCGGCTACGCTATCGAGTACGATGCAGTCGCGACCG GTGAGATTACTGCCGACATGCAGACGCGCCGGCTACGTGGATTGTTCTTCGCCGGGCAGATCAACGGCACCACCGGCTAC GAGGAGGCGGCAGCGCAGGGATTGATGGCAGGGATTAATGCGGCCCACTATGTGCAGGGTAAGCCGCCGGTGATTTTGGG GCGAGCCGAAGCGTACATTGGTGTCTTGATCGATGACCTGACCACCAAAGAGATTCGTGAGCCGTACCGCATGTTTACCT CGCGGGCTGAGTATCGGCTGCTACTGCGTGGAGATAACGCCGATCTGCGCCTGACGCCACTGGCGTATCGGCTTGGACTG GTTGACGGTGAGCGGGCAGCGGTCGTGGAAGCGCGACGACAGCAGACCGAGCATGCATTGCAGCAGATGCGTGAACGTCG CATCTTCCCTTCAGCAGCGGTTAATGCCAGCCTGGAAGCACACGGGATCAAGCCGATCAGTCAACCGGTTACCGTTGCCG AAGTTCTGGCCCGACCCGAAGTCCGGTACACACAATTGCGCGATGCACTTCCTGACTTACCGGCGCTCAGTGATGCGGTG ATCGAGCAGGTGGAAATCGGTTGCAAATACAGCGGCTACATCGCCCGTCAGGAGCGTGAAGTGGCACGCATGCAGAAGAT GGAGCATCGGCGGATTCCACCTGATTTTGACTACACCTCATTGCCGGGTTTACGTAATGAAGCCCGACAGGTGCTGATGC GTTTCCGTCCGGCGACGTTAGGCCAGGCCGGGCGGCTGGCCGGAATCAATCCGGCAGACGTAGCCATTATTCTGTTCGCG CTTGAGCGCCGGCAGGGAGATCAGGTGGCGAGATGA
Upstream 100 bases:
>100_bases CAACATCATCGTCTATAATAAGGATGGTGCGCATATGATGATGAGTGATCAATAGCGAACGAACGTCTTCGCACGTTGCG TCATTATACCACGTCCGCCT
Downstream 100 bases:
>100_bases TACCCTCCCCCTGACACCCCACCCGTGTCGTGCTATGCATTACCCACATGTCACCCTGCGTTAGGCCGGACTGCAAGCGC TCCCCGTGGCACGGGTGGCG
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MQTRYDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDALGGLMGRITDRSAIQIR LLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQAMVERIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLR GRAITGEAMWGAGRAGEAPAMALSEDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDTPLSFGHYYPELGETIPP PEYHGPPAPVYPHPQLDGWRPQLPCYQVHTTPEFHAIIRENLHRAPLFSGIIEGVGPRYCPSIEDKIVRFADKERHGLFL EPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNVELMRIGYAIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGY EEAAAQGLMAGINAAHYVQGKPPVILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGL VDGERAAVVEARRQQTEHALQQMRERRIFPSAAVNASLEAHGIKPISQPVTVAEVLARPEVRYTQLRDALPDLPALSDAV IEQVEIGCKYSGYIARQEREVARMQKMEHRRIPPDFDYTSLPGLRNEARQVLMRFRPATLGQAGRLAGINPADVAIILFA LERRQGDQVAR
Sequences:
>Translated_651_residues MQTRYDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDALGGLMGRITDRSAIQIR LLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQAMVERIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLR GRAITGEAMWGAGRAGEAPAMALSEDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDTPLSFGHYYPELGETIPP PEYHGPPAPVYPHPQLDGWRPQLPCYQVHTTPEFHAIIRENLHRAPLFSGIIEGVGPRYCPSIEDKIVRFADKERHGLFL EPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNVELMRIGYAIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGY EEAAAQGLMAGINAAHYVQGKPPVILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGL VDGERAAVVEARRQQTEHALQQMRERRIFPSAAVNASLEAHGIKPISQPVTVAEVLARPEVRYTQLRDALPDLPALSDAV IEQVEIGCKYSGYIARQEREVARMQKMEHRRIPPDFDYTSLPGLRNEARQVLMRFRPATLGQAGRLAGINPADVAIILFA LERRQGDQVAR >Mature_651_residues MQTRYDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDALGGLMGRITDRSAIQIR LLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQAMVERIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLR GRAITGEAMWGAGRAGEAPAMALSEDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDTPLSFGHYYPELGETIPP PEYHGPPAPVYPHPQLDGWRPQLPCYQVHTTPEFHAIIRENLHRAPLFSGIIEGVGPRYCPSIEDKIVRFADKERHGLFL EPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNVELMRIGYAIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGY EEAAAQGLMAGINAAHYVQGKPPVILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGL VDGERAAVVEARRQQTEHALQQMRERRIFPSAAVNASLEAHGIKPISQPVTVAEVLARPEVRYTQLRDALPDLPALSDAV IEQVEIGCKYSGYIARQEREVARMQKMEHRRIPPDFDYTSLPGLRNEARQVLMRFRPATLGQAGRLAGINPADVAIILFA LERRQGDQVAR
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=669, Percent_Identity=40.9566517189836, Blast_Score=428, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=694, Percent_Identity=39.4812680115274, Blast_Score=414, Evalue=1e-115, Organism=Homo sapiens, GI183227703, Length=709, Percent_Identity=38.6459802538787, Blast_Score=409, Evalue=1e-114, Organism=Escherichia coli, GI2367273, Length=641, Percent_Identity=47.581903276131, Blast_Score=572, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17534255, Length=653, Percent_Identity=38.1316998468606, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6321202, Length=663, Percent_Identity=41.7797888386124, Blast_Score=475, Evalue=1e-134, Organism=Drosophila melanogaster, GI24658174, Length=656, Percent_Identity=41.6158536585366, Blast_Score=429, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_CHLAA (A9WKL7)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001637034.1 - ProteinModelPortal: A9WKL7 - SMR: A9WKL7 - GeneID: 5825263 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_3460 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 71886; Mature: 71886
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTRYDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVRE CCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHH IDALGGLMGRITDRSAIQIRLLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQ HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AMVERIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLRGRAITGEAMWGAGRAGEAPA HHHHHCCCCCCCCEEEEEEECCCCHHHHCCCEEECCCHHCCCEECCCCCCCCCCCCCCCH MALSEDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDTPLSFGHYYPELGETIPP HHHHHHHHHHCCCEEEEECCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCHHHCCCCCC PEYHGPPAPVYPHPQLDGWRPQLPCYQVHTTPEFHAIIRENLHRAPLFSGIIEGVGPRYC CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCC PSIEDKIVRFADKERHGLFLEPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNVELM CCHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE RIGYAIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGYEEAAAQGLMAGINAAHYVQG EEEEEEEECCEECCCEEHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCHHEEECC KPPVILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGL CCCEEEECCCCEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHEEEC VDGERAAVVEARRQQTEHALQQMRERRIFPSAAVNASLEAHGIKPISQPVTVAEVLARPE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCCCCCCHHHHHHHCCCC VRYTQLRDALPDLPALSDAVIEQVEIGCKYSGYIARQEREVARMQKMEHRRIPPDFDYTS HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC LPGLRNEARQVLMRFRPATLGQAGRLAGINPADVAIILFALERRQGDQVAR CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTRYDVIVVGAGHAGCEAAHAAARLGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVRE CCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHH IDALGGLMGRITDRSAIQIRLLNESKGPAVQSLRAQCDKRLYARLMKETLERVPNLDLRQ HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AMVERIAPPNADTQCFTVTTHTGWRYLAPAVILTTGTFLRGRAITGEAMWGAGRAGEAPA HHHHHCCCCCCCCEEEEEEECCCCHHHHCCCEEECCCHHCCCEECCCCCCCCCCCCCCCH MALSEDLAALGFPLVRLKTGTPPRLAAATIDFSLTELQPGSDTPLSFGHYYPELGETIPP HHHHHHHHHHCCCEEEEECCCCCCEEEEEECEEEEECCCCCCCCCCCCCCCHHHCCCCCC PEYHGPPAPVYPHPQLDGWRPQLPCYQVHTTPEFHAIIRENLHRAPLFSGIIEGVGPRYC CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCC PSIEDKIVRFADKERHGLFLEPEGWTTSEVYVQGCNTSLPEDVQWAMLRSIPALRNVELM CCHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE RIGYAIEYDAVATGEITADMQTRRLRGLFFAGQINGTTGYEEAAAQGLMAGINAAHYVQG EEEEEEEECCEECCCEEHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCHHEEECC KPPVILGRAEAYIGVLIDDLTTKEIREPYRMFTSRAEYRLLLRGDNADLRLTPLAYRLGL CCCEEEECCCCEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHEEEC VDGERAAVVEARRQQTEHALQQMRERRIFPSAAVNASLEAHGIKPISQPVTVAEVLARPE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCCCCCCHHHHHHHCCCC VRYTQLRDALPDLPALSDAVIEQVEIGCKYSGYIARQEREVARMQKMEHRRIPPDFDYTS HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC LPGLRNEARQVLMRFRPATLGQAGRLAGINPADVAIILFALERRQGDQVAR CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA