| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526482
Identifier: 222526482
GI number: 222526482
Start: 4049801
End: 4050571
Strand: Reverse
Name: 222526482
Synonym: Chy400_3249
Alternate gene names: NA
Gene position: 4050571-4049801 (Counterclockwise)
Preceding gene: 222526485
Following gene: 222526479
Centisome position: 76.88
GC content: 58.11
Gene sequence:
>771_bases ATGAACACATCACTTGCTCGTCCAATATTTCATTTGCAACAGATTGGGGTGGTGATTGGCTTGCTGGCAACTATTGTGAC CAACGTTCTGGCGAATACGTTGCCACTCAACGGCCAGACCACCGGTGAGATTTCAGACCGCTACCCTCTTTTTATCACAC CGCCCGGCTATGTGTTCTCGATTTGGAGCTTGATTTATATCGGTCTCATTGGTTATGCGATCTATCAGCTTCTCCCGGCG CAGGCAACCAATCCCCGCCTGCGGGCCGCCGCGCCCTGGTTCGGACTGAGCTGTGTCGGCAATATTGCGTGGCTCATCTT CTGGCACTACAATCTGCCCCTGCTCTCACTACCGGCAATGCTGGTCGTGCTGGGTGGGCTGATTGGTGTCTATCTGGCCC TGCGTGGTCCCGGCCAGGCAGAGGTTGGCGAGCAGTGGCTGGTACAGCCAACGTTTAGCCTGTACCTGGGCTGGATTTGC GTCGCCACCCTGGTCAATGGTGGTGTCTTGCTGTACGAGCTGGGCTGGCGCGATACCGGCACCGGTGGGATTGTGAGTAC GATGGTGCTGCTGGGACTGGCTGCCGGCCTGAGCTGGTGGTTTGTCCACCGCTGGCAAGATGGGATTTTGCCGCTGGTGG TAGCCTGGGCAGCCAGTGGGATCGCGCTTAAGCAAGCAACTATCGTGCCGCTTGCCACGATGGCGTGGGTGGTAGCGCTG CTTACGGCGGGGATGGCGGTCATGGTGGGAGTGAAGAGGCTCAGGAAATGA
Upstream 100 bases:
>100_bases TAGCTCTTCCAGTCTGGCATGGCGACCATTCTCCTCATACAATACAGGTAGGCGAGTCTACGCACTTCGCCTCGGTACCA TCATTATAATGGAGATTACG
Downstream 100 bases:
>100_bases GCACTGGCGTGGCAGGCAGTACATGTTGCCGGCCAGCAGCGATTGCCCTTCACCGATTTGCACCCTCTCTGACTACCAAA GCACGCAGGCGAGCGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNTSLARPIFHLQQIGVVIGLLATIVTNVLANTLPLNGQTTGEISDRYPLFITPPGYVFSIWSLIYIGLIGYAIYQLLPA QATNPRLRAAAPWFGLSCVGNIAWLIFWHYNLPLLSLPAMLVVLGGLIGVYLALRGPGQAEVGEQWLVQPTFSLYLGWIC VATLVNGGVLLYELGWRDTGTGGIVSTMVLLGLAAGLSWWFVHRWQDGILPLVVAWAASGIALKQATIVPLATMAWVVAL LTAGMAVMVGVKRLRK
Sequences:
>Translated_256_residues MNTSLARPIFHLQQIGVVIGLLATIVTNVLANTLPLNGQTTGEISDRYPLFITPPGYVFSIWSLIYIGLIGYAIYQLLPA QATNPRLRAAAPWFGLSCVGNIAWLIFWHYNLPLLSLPAMLVVLGGLIGVYLALRGPGQAEVGEQWLVQPTFSLYLGWIC VATLVNGGVLLYELGWRDTGTGGIVSTMVLLGLAAGLSWWFVHRWQDGILPLVVAWAASGIALKQATIVPLATMAWVVAL LTAGMAVMVGVKRLRK >Mature_256_residues MNTSLARPIFHLQQIGVVIGLLATIVTNVLANTLPLNGQTTGEISDRYPLFITPPGYVFSIWSLIYIGLIGYAIYQLLPA QATNPRLRAAAPWFGLSCVGNIAWLIFWHYNLPLLSLPAMLVVLGGLIGVYLALRGPGQAEVGEQWLVQPTFSLYLGWIC VATLVNGGVLLYELGWRDTGTGGIVSTMVLLGLAAGLSWWFVHRWQDGILPLVVAWAASGIALKQATIVPLATMAWVVAL LTAGMAVMVGVKRLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27677; Mature: 27677
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSLARPIFHLQQIGVVIGLLATIVTNVLANTLPLNGQTTGEISDRYPLFITPPGYVFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHH IWSLIYIGLIGYAIYQLLPAQATNPRLRAAAPWFGLSCVGNIAWLIFWHYNLPLLSLPAM HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LVVLGGLIGVYLALRGPGQAEVGEQWLVQPTFSLYLGWICVATLVNGGVLLYELGWRDTG HHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC TGGIVSTMVLLGLAAGLSWWFVHRWQDGILPLVVAWAASGIALKQATIVPLATMAWVVAL CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LTAGMAVMVGVKRLRK HHHHHHHHHHHHHHCC >Mature Secondary Structure MNTSLARPIFHLQQIGVVIGLLATIVTNVLANTLPLNGQTTGEISDRYPLFITPPGYVFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHH IWSLIYIGLIGYAIYQLLPAQATNPRLRAAAPWFGLSCVGNIAWLIFWHYNLPLLSLPAM HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH LVVLGGLIGVYLALRGPGQAEVGEQWLVQPTFSLYLGWICVATLVNGGVLLYELGWRDTG HHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC TGGIVSTMVLLGLAAGLSWWFVHRWQDGILPLVVAWAASGIALKQATIVPLATMAWVVAL CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LTAGMAVMVGVKRLRK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA