| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is secA [C]
Identifier: 222526294
GI number: 222526294
Start: 3776866
End: 3777705
Strand: Reverse
Name: secA [C]
Synonym: Chy400_3060
Alternate gene names: 222526294
Gene position: 3777705-3776866 (Counterclockwise)
Preceding gene: 222526295
Following gene: 222526291
Centisome position: 71.7
GC content: 56.31
Gene sequence:
>840_bases ATGAACCCAGCCAAAACGCTTAAATTAGGCCGCAACGATCCCTGCCACTGTGGTAGTGGGCGCAAATACAAGGATTGCCA TTTGCGCATCGAAGAGGAATGGCGCAGTCAGCAATTACGCCTGCGCAACGCTCAAGACCAGCTCTTACAACGTATTCTGG CCAAAGCCACTGAGGCTGAAGCAGCGGAACTACAAACTGCCTTTGATCGATACTGGCAACAGCGTTACCAGTTTGCCCAG TTGGCCGAACTGAACCAGCGCGAAGGGTACGGGGCCGACCGCTTCATGGTCTGGTTTGCCTTCGACTATCGCCGATCAGA CGGACAGACACTGGTTGAGCAGATGGTACATCAGATGCAGGAGAGCGATCTATCACCGCTCGAACGACAGCTTCTGCCGA CGTGGGTCAATGTTCGCTTACGTCCGTACCAGGTTGAGCGACTACATCCCAATGCCGGTGCGACCCTACGTGATCTGCTA ACCGGCGAGGCGCTGATTCTGGCCGACAGCCATGCCTCATTGCGCCTGGAGCTTGCCGAAGTGATCGTCGGACATCTGGT GCCAGTTGACACACCACTTGGGCGAACAGCGCCGAACTACTACCTCGCCGGCCCAGCCGCCCACCTGACACCCGACACCG CCGGGCCAATTCGCACCTTCGCCGACGTTCATCTGGAAGCAATCCGGCGTGAACGTCCTGAAGCCGACTGGCAAACGCTC CTCAATGAACGGTCGGAGATTTTCAGTCACTTTATTTTGATCTTGCCGACCGACAAACCCGATCCAGACCGGATTCAGAA CTTTATCGCAGAGACTCGGCAGCGTTTGTTGGGAGAGTGA
Upstream 100 bases:
>100_bases ACGCTGTGCCTGTCGTTTTCGACTACAACCGACGATGCGCAACCAGTTTCTGGGCATGCGCCTTGCACTAGACCTGGAAT AATTAAGGAGCATTCGCTTT
Downstream 100 bases:
>100_bases TTACACCTGTTCAGGATCGTAAATCTCGGCGAGCGGCAGCGTGAAATGAAACGCGCTGCCGCGCCCTGGCATACTCTCGA CCCAGATTGTGCCCTGATGA
Product: SEC-C motif domain-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAFDRYWQQRYQFAQ LAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLL TGEALILADSHASLRLELAEVIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE
Sequences:
>Translated_279_residues MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAFDRYWQQRYQFAQ LAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLL TGEALILADSHASLRLELAEVIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE >Mature_279_residues MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAFDRYWQQRYQFAQ LAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLL TGEALILADSHASLRLELAEVIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE
Specific function: Involved In Protein Export. Interacts With The Secy/Sece Subunits. Seca Has A Central Role In Coupling The Hydrolysis Of ATP To The Transfer Of Pre-Secretory Periplasmic And Outer Membrane Proteins Across The Membrane. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm Side Of Plasma Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32214; Mature: 32214
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAE CCCHHCEECCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AAELQTAFDRYWQQRYQFAQLAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH ESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLLTGEALILADSHASLRLELAE HCCCCHHHHHHCCHHHCCEECEEEEEEECCCCCCHHHHHHCCCEEEEECCCCHHHHHHHH VIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE HHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAE CCCHHCEECCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AAELQTAFDRYWQQRYQFAQLAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH ESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLLTGEALILADSHASLRLELAE HCCCCHHHHHHCCHHHCCEECEEEEEEECCCCCCHHHHHHCCCEEEEECCCCHHHHHHHH VIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE HHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA