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The map label for this gene is yerB [H]

Identifier: 222526291

GI number: 222526291

Start: 3771518

End: 3772678

Strand: Reverse

Name: yerB [H]

Synonym: Chy400_3057

Alternate gene names: 222526291

Gene position: 3772678-3771518 (Counterclockwise)

Preceding gene: 222526294

Following gene: 222526290

Centisome position: 71.6

GC content: 54.44

Gene sequence:

>1161_bases
ATGATAAGCAGATTTTCTTCGCTAGCCCTGTTGCTCAGTATCGTGCTCATCGGCGCGTGTGGATCGGCTGTTGCGAATAC
GCCAACAGCTACTCCACTCCCAACCCTCATCGCATTAGAGACGCGATTACCAACGGATACACTACAACCAACAACCGTTC
CAACACTACCGCCTACGGCAACACCCGCAGCTACTGCTACTCCTGAACCAACCGCTACCCCTGAACCAACACCCTCACCT
GAACCGATAACAGCACCGCTGGCGGTTCCACGTGGTTCGGTGACTACTCGGCCCTTCGCAGTGATGTATGACAACCATCC
GAATGCCTACCCGCAGACCGGTATGGATGGCGCTGCGATTGTCTTTGAAGCACTGGCCGAATTTGGGATTACTCGCTATA
TGGCGATCTTTATTCCCGGCATTTCACCCGACATGCCGGTCATTGGCCCGGTACGCAGTGCTCGACCATATTATGTCGAA
TGGGCAAAAGGGCTACGGGCAGTGTATGTCCATGCCGGAGGATCGCCAGAAGGGTTGTTGCTGGCAGAAACATCGATTGA
ACTGATCAATATGGATGCATTGCGCAGCAACGCCAGCCGCTATTTCTATCGCACGCGCGACCGTAGCGCCCCCCACAACC
TCTACACCAACAGTGAAAACATCGCAGCTTTTGCCGCAGCGAATGATCGTCCGGTTGAAGGATTGGAAGAGATTGGGTTT
ACCTACTCGCCCGAAGCTCCGCCGGAAGATCGTCCTGCACAACAAGAATTGCGCTACTTCTTCATTTACCGTGAGGCAAG
TGTAGGCTGGAGCTACGATCCGGCAACGAACAGCTACCGCTACTTCCGCGGTAATCGTCCACACGTTGATGCAGCAACCG
GTAATCAGTTGCAGTTTAAGAATGTTGTCGTGTTGGAAGTGCCCGAACGACCTATCCCCAACGATCCCAAGGGTCGTATC
GAGCAAGATGTGATCGGTGAAGGTCAGGCCCGTATCTTCCGCGACGGTCGCATGATTGAAGCGACCTGGCAGAAAGCAGC
CGGCTATGCACAACTGTATCTGGTTGACGCGAATGGGAACGAAATACCACTCGCGCCCGGATCGGTCTGGATTGCCGCCA
TACCTGACCTTGCCAACCTGACCGTCGAAGGCGGTCGATAA

Upstream 100 bases:

>100_bases
GCAACCCAAAAGGATCGCTGCTTGCCGAATAGCAGAGCCATGGTATAATAGGCCGCCCGTGCTATCCGCCATGATCTGCG
GTGCACAAGGAAAGAGGAAC

Downstream 100 bases:

>100_bases
CGCTACACCCCGAAGCCTGTTGCTTCGGCTGCGATAGGCGGGCGTCGCCAGTGCTCTGGCCCTGTTGCCAGCACTCCTAT
CTACCACTGTTGCGCTCTGT

Product: PT repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MISRFSSLALLLSIVLIGACGSAVANTPTATPLPTLIALETRLPTDTLQPTTVPTLPPTATPAATATPEPTATPEPTPSP
EPITAPLAVPRGSVTTRPFAVMYDNHPNAYPQTGMDGAAIVFEALAEFGITRYMAIFIPGISPDMPVIGPVRSARPYYVE
WAKGLRAVYVHAGGSPEGLLLAETSIELINMDALRSNASRYFYRTRDRSAPHNLYTNSENIAAFAAANDRPVEGLEEIGF
TYSPEAPPEDRPAQQELRYFFIYREASVGWSYDPATNSYRYFRGNRPHVDAATGNQLQFKNVVVLEVPERPIPNDPKGRI
EQDVIGEGQARIFRDGRMIEATWQKAAGYAQLYLVDANGNEIPLAPGSVWIAAIPDLANLTVEGGR

Sequences:

>Translated_386_residues
MISRFSSLALLLSIVLIGACGSAVANTPTATPLPTLIALETRLPTDTLQPTTVPTLPPTATPAATATPEPTATPEPTPSP
EPITAPLAVPRGSVTTRPFAVMYDNHPNAYPQTGMDGAAIVFEALAEFGITRYMAIFIPGISPDMPVIGPVRSARPYYVE
WAKGLRAVYVHAGGSPEGLLLAETSIELINMDALRSNASRYFYRTRDRSAPHNLYTNSENIAAFAAANDRPVEGLEEIGF
TYSPEAPPEDRPAQQELRYFFIYREASVGWSYDPATNSYRYFRGNRPHVDAATGNQLQFKNVVVLEVPERPIPNDPKGRI
EQDVIGEGQARIFRDGRMIEATWQKAAGYAQLYLVDANGNEIPLAPGSVWIAAIPDLANLTVEGGR
>Mature_386_residues
MISRFSSLALLLSIVLIGACGSAVANTPTATPLPTLIALETRLPTDTLQPTTVPTLPPTATPAATATPEPTATPEPTPSP
EPITAPLAVPRGSVTTRPFAVMYDNHPNAYPQTGMDGAAIVFEALAEFGITRYMAIFIPGISPDMPVIGPVRSARPYYVE
WAKGLRAVYVHAGGSPEGLLLAETSIELINMDALRSNASRYFYRTRDRSAPHNLYTNSENIAAFAAANDRPVEGLEEIGF
TYSPEAPPEDRPAQQELRYFFIYREASVGWSYDPATNSYRYFRGNRPHVDAATGNQLQFKNVVVLEVPERPIPNDPKGRI
EQDVIGEGQARIFRDGRMIEATWQKAAGYAQLYLVDANGNEIPLAPGSVWIAAIPDLANLTVEGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021416
- InterPro:   IPR023158 [H]

Pfam domain/function: PF11258 DUF3048 [H]

EC number: NA

Molecular weight: Translated: 41867; Mature: 41867

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRFSSLALLLSIVLIGACGSAVANTPTATPLPTLIALETRLPTDTLQPTTVPTLPPTA
CCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
TPAATATPEPTATPEPTPSPEPITAPLAVPRGSVTTRPFAVMYDNHPNAYPQTGMDGAAI
CCCCCCCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHH
VFEALAEFGITRYMAIFIPGISPDMPVIGPVRSARPYYVEWAKGLRAVYVHAGGSPEGLL
HHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEHHCCCEEEEEECCCCCCCEE
LAETSIELINMDALRSNASRYFYRTRDRSAPHNLYTNSENIAAFAAANDRPVEGLEEIGF
EEECCEEEEEHHHHHCCCHHEEEEECCCCCCCCEECCCCCEEEEEECCCCCCHHHHHCCC
TYSPEAPPEDRPAQQELRYFFIYREASVGWSYDPATNSYRYFRGNRPHVDAATGNQLQFK
EECCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEC
NVVVLEVPERPIPNDPKGRIEQDVIGEGQARIFRDGRMIEATWQKAAGYAQLYLVDANGN
CEEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEECCEEEEEHHHHCCCEEEEEEEECCCC
EIPLAPGSVWIAAIPDLANLTVEGGR
EECCCCCCEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MISRFSSLALLLSIVLIGACGSAVANTPTATPLPTLIALETRLPTDTLQPTTVPTLPPTA
CCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
TPAATATPEPTATPEPTPSPEPITAPLAVPRGSVTTRPFAVMYDNHPNAYPQTGMDGAAI
CCCCCCCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHH
VFEALAEFGITRYMAIFIPGISPDMPVIGPVRSARPYYVEWAKGLRAVYVHAGGSPEGLL
HHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEHHCCCEEEEEECCCCCCCEE
LAETSIELINMDALRSNASRYFYRTRDRSAPHNLYTNSENIAAFAAANDRPVEGLEEIGF
EEECCEEEEEHHHHHCCCHHEEEEECCCCCCCCEECCCCCEEEEEECCCCCCHHHHHCCC
TYSPEAPPEDRPAQQELRYFFIYREASVGWSYDPATNSYRYFRGNRPHVDAATGNQLQFK
EECCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEC
NVVVLEVPERPIPNDPKGRIEQDVIGEGQARIFRDGRMIEATWQKAAGYAQLYLVDANGN
CEEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEECCEEEEEHHHHCCCEEEEEEEECCCC
EIPLAPGSVWIAAIPDLANLTVEGGR
EECCCCCCEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]