Click here to switch to the map view.

The map label for this gene is araL [H]

Identifier: 222526276

GI number: 222526276

Start: 3751650

End: 3752444

Strand: Direct

Name: araL [H]

Synonym: Chy400_3042

Alternate gene names: 222526276

Gene position: 3751650-3752444 (Clockwise)

Preceding gene: 222526275

Following gene: 222526277

Centisome position: 71.2

GC content: 57.11

Gene sequence:

>795_bases
ATGCAAACAATTCCACGTTATGACGGTTATATTTTCGATCTTGATGGTACAATCTATCTGGGTGACATTCTCTTGCCCGG
TGCTGCTGAACTCTTGCACACGCTACGCCGTGAGGGGCGTCGGGTCACATTTCTCTCGAACAATCCGACGAAGACACGTC
GTCAGTATGCCGAGCGGTTGCAGCGCCTGGGCATTGCTGCCGATGAGCACGAGATTGTGAACAGTTCCGCAGTTATGGTC
GAATGGCTGCTGGCCAATGCGCCCGGTGCGTCATTGTTCGTCGTTGGCGAAGCACCGCTCATCGGTGAACTGGAGGCAGC
CGGTTTTCCCCTGAGTGAAAAACCGGGTGAGATTGCCTTTGTGGTTGCTTCGTTTGATCGAACTTTCACCTATCGCAAGC
TACAAATCGCCTTTGATGCGATTCGGGCGGGTGCACGGTTGGTGGCGACCAATCCCGACCGGTTCTGCCCGGTGCCCGGT
GGCGGCGAGCCGGATGCTGCTGCAATCATTGCCGCTATCGAAGCCTGCACCGATACCCGCTGTGAGGTGATTGTCGGGAA
GCCGTCACCGATTATGGCCCGTACTGTTACCAATCTGATCGGCCTGCCTCCTGAGCGCTGTATCATCGTCGGCGACCGTC
TGATGACCGACATTGCCATGGGGGTGACCGCCGGCATGGATACCGCTCTGGTCTTGACCGGTGATAGTCAGCGCGCCGAT
CTGGAGCGTTCGCCGTATCAGCCAACCTATGTGCTGGAGCGGATTGATGAGCTGATTGGTGGGAGCGGCGTTTGA

Upstream 100 bases:

>100_bases
ATGGCAGACGTGCGACGCTTTAAATGTATCGCACGTCTGCTATTTGTGTGATACCATCTCTAGCGGTATGGCACGTGGTG
AACAAGATACTGGAGCTGGC

Downstream 100 bases:

>100_bases
GCGCACACAGTTACCTGATGGCACTTCCATCGCTCGTGCGGCCTGCGCAATACCCATAACCCGGCATTATCTCCAGATTG
CTGAGTCCATCACACTGCTG

Product: HAD-superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQTIPRYDGYIFDLDGTIYLGDILLPGAAELLHTLRREGRRVTFLSNNPTKTRRQYAERLQRLGIAADEHEIVNSSAVMV
EWLLANAPGASLFVVGEAPLIGELEAAGFPLSEKPGEIAFVVASFDRTFTYRKLQIAFDAIRAGARLVATNPDRFCPVPG
GGEPDAAAIIAAIEACTDTRCEVIVGKPSPIMARTVTNLIGLPPERCIIVGDRLMTDIAMGVTAGMDTALVLTGDSQRAD
LERSPYQPTYVLERIDELIGGSGV

Sequences:

>Translated_264_residues
MQTIPRYDGYIFDLDGTIYLGDILLPGAAELLHTLRREGRRVTFLSNNPTKTRRQYAERLQRLGIAADEHEIVNSSAVMV
EWLLANAPGASLFVVGEAPLIGELEAAGFPLSEKPGEIAFVVASFDRTFTYRKLQIAFDAIRAGARLVATNPDRFCPVPG
GGEPDAAAIIAAIEACTDTRCEVIVGKPSPIMARTVTNLIGLPPERCIIVGDRLMTDIAMGVTAGMDTALVLTGDSQRAD
LERSPYQPTYVLERIDELIGGSGV
>Mature_264_residues
MQTIPRYDGYIFDLDGTIYLGDILLPGAAELLHTLRREGRRVTFLSNNPTKTRRQYAERLQRLGIAADEHEIVNSSAVMV
EWLLANAPGASLFVVGEAPLIGELEAAGFPLSEKPGEIAFVVASFDRTFTYRKLQIAFDAIRAGARLVATNPDRFCPVPG
GGEPDAAAIIAAIEACTDTRCEVIVGKPSPIMARTVTNLIGLPPERCIIVGDRLMTDIAMGVTAGMDTALVLTGDSQRAD
LERSPYQPTYVLERIDELIGGSGV

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10092677, Length=278, Percent_Identity=35.6115107913669, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI108796653, Length=265, Percent_Identity=35.0943396226415, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI14149777, Length=233, Percent_Identity=27.0386266094421, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1786890, Length=248, Percent_Identity=33.4677419354839, Blast_Score=133, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17558880, Length=285, Percent_Identity=32.6315789473684, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17562458, Length=285, Percent_Identity=32.6315789473684, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17560956, Length=285, Percent_Identity=32.6315789473684, Blast_Score=128, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI193210059, Length=271, Percent_Identity=28.7822878228782, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI86563050, Length=269, Percent_Identity=28.6245353159851, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17557870, Length=249, Percent_Identity=28.9156626506024, Blast_Score=87, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6319965, Length=243, Percent_Identity=28.3950617283951, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24666141, Length=257, Percent_Identity=28.7937743190661, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24666137, Length=297, Percent_Identity=27.9461279461279, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24656330, Length=261, Percent_Identity=28.3524904214559, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24656326, Length=260, Percent_Identity=26.5384615384615, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19920940, Length=253, Percent_Identity=26.4822134387352, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24641437, Length=258, Percent_Identity=25.1937984496124, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859765, Length=259, Percent_Identity=22.3938223938224, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28503; Mature: 28503

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIPRYDGYIFDLDGTIYLGDILLPGAAELLHTLRREGRRVTFLSNNPTKTRRQYAERL
CCCCCCCCCEEEECCCEEEEECEECCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
QRLGIAADEHEIVNSSAVMVEWLLANAPGASLFVVGEAPLIGELEAAGFPLSEKPGEIAF
HHCCCCCCCHHHHCCHHHEEHHHHHCCCCCEEEEEECCCCEECHHHCCCCCCCCCCCEEE
VVASFDRTFTYRKLQIAFDAIRAGARLVATNPDRFCPVPGGGEPDAAAIIAAIEACTDTR
EEEECCCCEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
CEVIVGKPSPIMARTVTNLIGLPPERCIIVGDRLMTDIAMGVTAGMDTALVLTGDSQRAD
EEEEEECCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCC
LERSPYQPTYVLERIDELIGGSGV
CCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTIPRYDGYIFDLDGTIYLGDILLPGAAELLHTLRREGRRVTFLSNNPTKTRRQYAERL
CCCCCCCCCEEEECCCEEEEECEECCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
QRLGIAADEHEIVNSSAVMVEWLLANAPGASLFVVGEAPLIGELEAAGFPLSEKPGEIAF
HHCCCCCCCHHHHCCHHHEEHHHHHCCCCCEEEEEECCCCEECHHHCCCCCCCCCCCEEE
VVASFDRTFTYRKLQIAFDAIRAGARLVATNPDRFCPVPGGGEPDAAAIIAAIEACTDTR
EEEECCCCEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
CEVIVGKPSPIMARTVTNLIGLPPERCIIVGDRLMTDIAMGVTAGMDTALVLTGDSQRAD
EEEEEECCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCC
LERSPYQPTYVLERIDELIGGSGV
CCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639 [H]