| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526266
Identifier: 222526266
GI number: 222526266
Start: 3739024
End: 3739872
Strand: Reverse
Name: 222526266
Synonym: Chy400_3032
Alternate gene names: NA
Gene position: 3739872-3739024 (Counterclockwise)
Preceding gene: 222526271
Following gene: 222526262
Centisome position: 70.98
GC content: 55.12
Gene sequence:
>849_bases GTGGCAAACCACTTTCCATTCCGTCGGTATTGTGTTGTCGCTCTGATGCTACTCATCGTGTCAACCAACGCCCTGGCTCA ACCCGTTACGCAGACAACAACCACCACTGTCTTCATCCCAATGGTCGCCAATCCATTGCCACCACTTTCTAGCAACTGGC TGGAACGGGTGAACGGCTATCGACTACGCGCCGGTGTTCCTCCGGTCACCGAAGATGCTACCCTCAACAGCAATTGCTTT GAACACGCCCGCTATATGGCCGAAAACAATCACCTGACGCATAACCAGGACCCGAACCGTCCTTTCGCTTCCGCTGCCGG CCAGATCTGCGCCCAAAAAGGCAATGCCTGGATTGGAGGAGGTATTGTGTGGGAACCTGCCCACGCCGTTGATGGCTGGA TGCGCTCGGTCGGTCACCGGATCTGGCTCCTGTACCCGACGACTCCTACATTCGGTTTCGGCTTCTACACAACCAGTAAT GGAAATACAAGCGCGGCAGCACTGGATGTACTATCGTATTTCAACAATGGCGACAGTTACCCCAACTGGCCGGTGCGCTA TCCGGCACCGAATCAGACCGACATCCCACCGACGCAATTCCCGATCACCGTACATTGGCGCTACTTCGGCGACACCCCGA TTGTCAGCAGCACTGCTTTACGTGTCGTGGGTGGCGGCAATCTCGCGCATAGCTTCTCAACCTCATTACCGGTTGGACAC AAGGGGATCGTGATCACGCCAACGCTCAGCCTTCCCCCCAACACATTGATCGAGGTTTCAGTCAACGGATCATACGCAAA TCAACCGTTTAGCTACACCTGGCAATTTCAGACGGGAAGTGGGAGTTGA
Upstream 100 bases:
>100_bases CCTACCCGCAGAATAGCCAGGATGAGCTATTGTCTCTCACGGTAAACACCATGTACACTAGAGCAAGATAACCGGAACGG ATTTCAGTAAGGAGCTGCTC
Downstream 100 bases:
>100_bases TGGGGCGTGATTATTTGTATCGCCTTGCTGTAACACCTTACAGGCGCCCAGGCTCACGAACGTTGACAATGGACACCAGA CGGCATAGCCTGCTTTCTGC
Product: SCP-like extracellular
Products: NA
Alternate protein names: Allergen V5/Tpx-1 Family Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGYRLRAGVPPVTEDATLNSNCF EHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGGGIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSN GNTSAAALDVLSYFNNGDSYPNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS
Sequences:
>Translated_282_residues MANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGYRLRAGVPPVTEDATLNSNCF EHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGGGIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSN GNTSAAALDVLSYFNNGDSYPNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS >Mature_281_residues ANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGYRLRAGVPPVTEDATLNSNCFE HARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGGGIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSNG NTSAAALDVLSYFNNGDSYPNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGHK GIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30841; Mature: 30710
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGY CCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCE RLRAGVPPVTEDATLNSNCFEHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGG EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECC GIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSNGNTSAAALDVLSYFNNGDSY CEEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC PNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH CCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCC KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure ANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGY CCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCE RLRAGVPPVTEDATLNSNCFEHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGG EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECC GIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSNGNTSAAALDVLSYFNNGDSY CEEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC PNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH CCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCC KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA