Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526266

Identifier: 222526266

GI number: 222526266

Start: 3739024

End: 3739872

Strand: Reverse

Name: 222526266

Synonym: Chy400_3032

Alternate gene names: NA

Gene position: 3739872-3739024 (Counterclockwise)

Preceding gene: 222526271

Following gene: 222526262

Centisome position: 70.98

GC content: 55.12

Gene sequence:

>849_bases
GTGGCAAACCACTTTCCATTCCGTCGGTATTGTGTTGTCGCTCTGATGCTACTCATCGTGTCAACCAACGCCCTGGCTCA
ACCCGTTACGCAGACAACAACCACCACTGTCTTCATCCCAATGGTCGCCAATCCATTGCCACCACTTTCTAGCAACTGGC
TGGAACGGGTGAACGGCTATCGACTACGCGCCGGTGTTCCTCCGGTCACCGAAGATGCTACCCTCAACAGCAATTGCTTT
GAACACGCCCGCTATATGGCCGAAAACAATCACCTGACGCATAACCAGGACCCGAACCGTCCTTTCGCTTCCGCTGCCGG
CCAGATCTGCGCCCAAAAAGGCAATGCCTGGATTGGAGGAGGTATTGTGTGGGAACCTGCCCACGCCGTTGATGGCTGGA
TGCGCTCGGTCGGTCACCGGATCTGGCTCCTGTACCCGACGACTCCTACATTCGGTTTCGGCTTCTACACAACCAGTAAT
GGAAATACAAGCGCGGCAGCACTGGATGTACTATCGTATTTCAACAATGGCGACAGTTACCCCAACTGGCCGGTGCGCTA
TCCGGCACCGAATCAGACCGACATCCCACCGACGCAATTCCCGATCACCGTACATTGGCGCTACTTCGGCGACACCCCGA
TTGTCAGCAGCACTGCTTTACGTGTCGTGGGTGGCGGCAATCTCGCGCATAGCTTCTCAACCTCATTACCGGTTGGACAC
AAGGGGATCGTGATCACGCCAACGCTCAGCCTTCCCCCCAACACATTGATCGAGGTTTCAGTCAACGGATCATACGCAAA
TCAACCGTTTAGCTACACCTGGCAATTTCAGACGGGAAGTGGGAGTTGA

Upstream 100 bases:

>100_bases
CCTACCCGCAGAATAGCCAGGATGAGCTATTGTCTCTCACGGTAAACACCATGTACACTAGAGCAAGATAACCGGAACGG
ATTTCAGTAAGGAGCTGCTC

Downstream 100 bases:

>100_bases
TGGGGCGTGATTATTTGTATCGCCTTGCTGTAACACCTTACAGGCGCCCAGGCTCACGAACGTTGACAATGGACACCAGA
CGGCATAGCCTGCTTTCTGC

Product: SCP-like extracellular

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGYRLRAGVPPVTEDATLNSNCF
EHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGGGIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSN
GNTSAAALDVLSYFNNGDSYPNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH
KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS

Sequences:

>Translated_282_residues
MANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGYRLRAGVPPVTEDATLNSNCF
EHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGGGIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSN
GNTSAAALDVLSYFNNGDSYPNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH
KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS
>Mature_281_residues
ANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGYRLRAGVPPVTEDATLNSNCFE
HARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGGGIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSNG
NTSAAALDVLSYFNNGDSYPNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGHK
GIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30841; Mature: 30710

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGY
CCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCE
RLRAGVPPVTEDATLNSNCFEHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGG
EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECC
GIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSNGNTSAAALDVLSYFNNGDSY
CEEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
PNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH
CCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCC
KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS
CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
ANHFPFRRYCVVALMLLIVSTNALAQPVTQTTTTTVFIPMVANPLPPLSSNWLERVNGY
CCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCE
RLRAGVPPVTEDATLNSNCFEHARYMAENNHLTHNQDPNRPFASAAGQICAQKGNAWIGG
EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECC
GIVWEPAHAVDGWMRSVGHRIWLLYPTTPTFGFGFYTTSNGNTSAAALDVLSYFNNGDSY
CEEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
PNWPVRYPAPNQTDIPPTQFPITVHWRYFGDTPIVSSTALRVVGGGNLAHSFSTSLPVGH
CCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCC
KGIVITPTLSLPPNTLIEVSVNGSYANQPFSYTWQFQTGSGS
CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA