| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is aceE [H]
Identifier: 222526271
GI number: 222526271
Start: 3745767
End: 3748091
Strand: Reverse
Name: aceE [H]
Synonym: Chy400_3037
Alternate gene names: 222526271
Gene position: 3748091-3745767 (Counterclockwise)
Preceding gene: 222526274
Following gene: 222526266
Centisome position: 71.14
GC content: 58.41
Gene sequence:
>2325_bases ATGCCCCACACTGAGCCAAACCCTGCGCTGATTAGCGCCATTGAAGAGGTGCAACAGCGCGTGCTCTGGCTGTCAACGCT GATGATCCATCACGCTAACCATGTGCGTCCCAATCTGGATGGGGTAAAGGTGGGTGGTCATCAGGCTTCTTCTGCGTCAA TGGTGACGATATTAACCACGTTGTATTTGTGTTATCTGCGACCTGGTGACCGGGTCTCGATTAAGCCACACGCTTCACCA GCCTATCATGCGCTCCAGTACTTGCTCGGTCGGCTCGATGCCCGCTATCTCACGCAACTGCGGGCATTTGGCGGTTTGCA GGCTTATCCGTCACGCACCAAAGACCCTGATGCGCCCGATTTCTCAACCGGATCGGTTGGTCTGGGGGCAGTAGCCCCGG CCTTCGCCGCGCTCAGTGCTCACTACATTGAAGCCCACTTCGGCAAACCGGCGACCCAACGCTTCATCGCGCTGGTCGGT GATGCTGAACTCGATGAAGGGAACGTTTGGGAGGCGGTGATCGATCCGGCGCTCGATCAGCTCGACAATCTGCTCTGGAT CGTTGACCTTAACCGTCAGAGTCTGGATCGGGTAGTGCCTGGTATTCGCGCTGCCCATCTCAAGCGATTGTTTGCCGAGA GCGGCTGGCGGGTGTTGGAAGCCAAATATGGTCGGCGACTTCAAGCGCTCTTTGCCCAACCGGACGGCGAGGCGCTACGT GCGCGCATTGACGAGATGAGTAACGAGGAGTATCAGGCTCTCATTCGACTCAATGGTCGCGATCTACGTCCACGACTGAT CAATAACGATGAGCGATTGGCCCGTCTGTTGGCACAGGTGCCTGACGATGAGTTACCGGCAACCCTGGCCAACCTGGGTG GTCACGATGTAAGCGAACTCCTGGCGACGCTGGCCGCAGCCGATGCCGAACCGCGCCGACCAACCATCATTTTTGCCTAT ACGATCAAAGGGTGGGGTTTACCGATTGCCGGCAATCCGCTCAACCACTCGATGCTCCTTAGCCCAGAGCAGATCGAAGC CCTGCGCGAACAGTTTGCCATTCCACCCGGCCACGAATGGGATCGGCTGCCGGAGGATTCGCCGGGCGGGAAATTGTGCG CGGAAGCGGCCAAACGACTCTACGGTGTGGCGACGCCCCCGCTTTCGCCACCAGCCATCCCATTACCCGATGAGATTACC GTCCCGACCAGCGGTACAGTCAGCACCCAGGACACATTCGGACGCTTTATGGTGCGACTTGCCGACATCGCCGGCCTGCG CGAACGCATCGTCACCGCATCACCTGATGTTTCGGTGTCTACCAACCTGGCCGGCTGGATCAACAAGACCGGTGTGTTTG CCCGGCGCGAAGAACCAGACTTTGAAACCGAAGCCTACCGTATGTTGCGCTGGCGACGCTGGCCGGGTGGGCAGCATATC GAGTTGGGCATCTCGGAGATGAATCTCTTTATGCTGCTGGGCATGTTCGGTATCGCCGGCGATCTCATTGGGGAGCCGCT GATTCCGATTGGTACGGTGTACGACCCGTTTGTCTGTCGCGGGCTTGATGCCTTCATTTACGGCCTGTATTCAGGTGCAC GCTTTATTGTTGTCGGCACACCGAGTGGCATTACGCTCTCACCTGAAGGTGGCGCCCATCAGTCATCGGTCACCGCTTCG TTGGGGATGGAACTACCGCAACTGGCGAGTTTTGAACCCTGTTTTGCGCTTGAGACAGCCTGGCTGCTGCACGAAGCCCT GCGCCTGTGTCTCGATCCGAACGGCTCAGCCAGCTACCTGCGCCTCTCGACCCGGCCAATCGACCAGAGTTTATTGCAAC CCGCGCTTGATCGGTTCGGTACCGCTGAACTACGTCGGCAGGTTCTGCGTGGTGGCTACCGGCTGATCGACCGTACAGAC TATCGCGATCAGGCGCGATCCCCACTCGTACATATTGTGACCAGTGGTGTGCTGGTTCCCGAAGCGGTGAGCGCAGCCCA TTATTTGCAGCGGGAAGGGGTTGCCGTCAACGTCATCAACCTGACCAGTGCCCGCCGGGTTTACGAACACTGGCGGCATG GCGACGATTTGAGCTGGCTCTTCCTGCCAGACGAACGTAAAGCACCTATCGTCACGGTGCATGACGCTGCGTCGCACGCG CTGGCATGGCTCGGATCGGTCTTCGGCGTGCCCTTGCGAGCGCACGGAGTTGATCGTTTTGGTCAATCGGGAAGCCGCGA TGATCTCTATCGAGCCTTCCATCTCGATTCGATGTCGATTGTCGAGAGTGCGTTTGAGCTGGTAGATGAAGTGTATAGCG GCTGA
Upstream 100 bases:
>100_bases AGGAAGGGGAGCACGCCACTCCCCACTCTCCCGATGAGAGCAGAGCGGAGGAATGCTATAATAGATTCGGCCCCGCACAA TAAATGAAGAGGAGCAATGT
Downstream 100 bases:
>100_bases TGCGGGGGTTAGGTCACGACCTGAATACGCTCACCAGATGCGGGAGTATGGCTTCTACACTGAGCGCTTGCGGCCTGTAT GGGCAGGATCGCCGGTTTTT
Product: transketolase central subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MPHTEPNPALISAIEEVQQRVLWLSTLMIHHANHVRPNLDGVKVGGHQASSASMVTILTTLYLCYLRPGDRVSIKPHASP AYHALQYLLGRLDARYLTQLRAFGGLQAYPSRTKDPDAPDFSTGSVGLGAVAPAFAALSAHYIEAHFGKPATQRFIALVG DAELDEGNVWEAVIDPALDQLDNLLWIVDLNRQSLDRVVPGIRAAHLKRLFAESGWRVLEAKYGRRLQALFAQPDGEALR ARIDEMSNEEYQALIRLNGRDLRPRLINNDERLARLLAQVPDDELPATLANLGGHDVSELLATLAAADAEPRRPTIIFAY TIKGWGLPIAGNPLNHSMLLSPEQIEALREQFAIPPGHEWDRLPEDSPGGKLCAEAAKRLYGVATPPLSPPAIPLPDEIT VPTSGTVSTQDTFGRFMVRLADIAGLRERIVTASPDVSVSTNLAGWINKTGVFARREEPDFETEAYRMLRWRRWPGGQHI ELGISEMNLFMLLGMFGIAGDLIGEPLIPIGTVYDPFVCRGLDAFIYGLYSGARFIVVGTPSGITLSPEGGAHQSSVTAS LGMELPQLASFEPCFALETAWLLHEALRLCLDPNGSASYLRLSTRPIDQSLLQPALDRFGTAELRRQVLRGGYRLIDRTD YRDQARSPLVHIVTSGVLVPEAVSAAHYLQREGVAVNVINLTSARRVYEHWRHGDDLSWLFLPDERKAPIVTVHDAASHA LAWLGSVFGVPLRAHGVDRFGQSGSRDDLYRAFHLDSMSIVESAFELVDEVYSG
Sequences:
>Translated_774_residues MPHTEPNPALISAIEEVQQRVLWLSTLMIHHANHVRPNLDGVKVGGHQASSASMVTILTTLYLCYLRPGDRVSIKPHASP AYHALQYLLGRLDARYLTQLRAFGGLQAYPSRTKDPDAPDFSTGSVGLGAVAPAFAALSAHYIEAHFGKPATQRFIALVG DAELDEGNVWEAVIDPALDQLDNLLWIVDLNRQSLDRVVPGIRAAHLKRLFAESGWRVLEAKYGRRLQALFAQPDGEALR ARIDEMSNEEYQALIRLNGRDLRPRLINNDERLARLLAQVPDDELPATLANLGGHDVSELLATLAAADAEPRRPTIIFAY TIKGWGLPIAGNPLNHSMLLSPEQIEALREQFAIPPGHEWDRLPEDSPGGKLCAEAAKRLYGVATPPLSPPAIPLPDEIT VPTSGTVSTQDTFGRFMVRLADIAGLRERIVTASPDVSVSTNLAGWINKTGVFARREEPDFETEAYRMLRWRRWPGGQHI ELGISEMNLFMLLGMFGIAGDLIGEPLIPIGTVYDPFVCRGLDAFIYGLYSGARFIVVGTPSGITLSPEGGAHQSSVTAS LGMELPQLASFEPCFALETAWLLHEALRLCLDPNGSASYLRLSTRPIDQSLLQPALDRFGTAELRRQVLRGGYRLIDRTD YRDQARSPLVHIVTSGVLVPEAVSAAHYLQREGVAVNVINLTSARRVYEHWRHGDDLSWLFLPDERKAPIVTVHDAASHA LAWLGSVFGVPLRAHGVDRFGQSGSRDDLYRAFHLDSMSIVESAFELVDEVYSG >Mature_773_residues PHTEPNPALISAIEEVQQRVLWLSTLMIHHANHVRPNLDGVKVGGHQASSASMVTILTTLYLCYLRPGDRVSIKPHASPA YHALQYLLGRLDARYLTQLRAFGGLQAYPSRTKDPDAPDFSTGSVGLGAVAPAFAALSAHYIEAHFGKPATQRFIALVGD AELDEGNVWEAVIDPALDQLDNLLWIVDLNRQSLDRVVPGIRAAHLKRLFAESGWRVLEAKYGRRLQALFAQPDGEALRA RIDEMSNEEYQALIRLNGRDLRPRLINNDERLARLLAQVPDDELPATLANLGGHDVSELLATLAAADAEPRRPTIIFAYT IKGWGLPIAGNPLNHSMLLSPEQIEALREQFAIPPGHEWDRLPEDSPGGKLCAEAAKRLYGVATPPLSPPAIPLPDEITV PTSGTVSTQDTFGRFMVRLADIAGLRERIVTASPDVSVSTNLAGWINKTGVFARREEPDFETEAYRMLRWRRWPGGQHIE LGISEMNLFMLLGMFGIAGDLIGEPLIPIGTVYDPFVCRGLDAFIYGLYSGARFIVVGTPSGITLSPEGGAHQSSVTASL GMELPQLASFEPCFALETAWLLHEALRLCLDPNGSASYLRLSTRPIDQSLLQPALDRFGTAELRRQVLRGGYRLIDRTDY RDQARSPLVHIVTSGVLVPEAVSAAHYLQREGVAVNVINLTSARRVYEHWRHGDDLSWLFLPDERKAPIVTVHDAASHAL AWLGSVFGVPLRAHGVDRFGQSGSRDDLYRAFHLDSMSIVESAFELVDEVYSG
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=777, Percent_Identity=24.1956241956242, Blast_Score=182, Evalue=8e-47,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005478 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 85145; Mature: 85014
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTEPNPALISAIEEVQQRVLWLSTLMIHHANHVRPNLDGVKVGGHQASSASMVTILTT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHH LYLCYLRPGDRVSIKPHASPAYHALQYLLGRLDARYLTQLRAFGGLQAYPSRTKDPDAPD HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC FSTGSVGLGAVAPAFAALSAHYIEAHFGKPATQRFIALVGDAELDEGNVWEAVIDPALDQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LDNLLWIVDLNRQSLDRVVPGIRAAHLKRLFAESGWRVLEAKYGRRLQALFAQPDGEALR HCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHCCCCHHHHH ARIDEMSNEEYQALIRLNGRDLRPRLINNDERLARLLAQVPDDELPATLANLGGHDVSEL HHHHHHCCHHEEEEEEECCCCCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHH LATLAAADAEPRRPTIIFAYTIKGWGLPIAGNPLNHSMLLSPEQIEALREQFAIPPGHEW HHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC DRLPEDSPGGKLCAEAAKRLYGVATPPLSPPAIPLPDEITVPTSGTVSTQDTFGRFMVRL CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHH ADIAGLRERIVTASPDVSVSTNLAGWINKTGVFARREEPDFETEAYRMLRWRRWPGGQHI HHHHHHHHHHEECCCCCEEECCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEE ELGISEMNLFMLLGMFGIAGDLIGEPLIPIGTVYDPFVCRGLDAFIYGLYSGARFIVVGT EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC PSGITLSPEGGAHQSSVTASLGMELPQLASFEPCFALETAWLLHEALRLCLDPNGSASYL CCCEEECCCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE RLSTRPIDQSLLQPALDRFGTAELRRQVLRGGYRLIDRTDYRDQARSPLVHIVTSGVLVP EEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCHHHHCCCCEEHHHCCCHHH EAVSAAHYLQREGVAVNVINLTSARRVYEHWRHGDDLSWLFLPDERKAPIVTVHDAASHA HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECHHHHH LAWLGSVFGVPLRAHGVDRFGQSGSRDDLYRAFHLDSMSIVESAFELVDEVYSG HHHHHHHHCCCHHHCCCHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHTEPNPALISAIEEVQQRVLWLSTLMIHHANHVRPNLDGVKVGGHQASSASMVTILTT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHH LYLCYLRPGDRVSIKPHASPAYHALQYLLGRLDARYLTQLRAFGGLQAYPSRTKDPDAPD HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC FSTGSVGLGAVAPAFAALSAHYIEAHFGKPATQRFIALVGDAELDEGNVWEAVIDPALDQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LDNLLWIVDLNRQSLDRVVPGIRAAHLKRLFAESGWRVLEAKYGRRLQALFAQPDGEALR HCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHCCCCHHHHH ARIDEMSNEEYQALIRLNGRDLRPRLINNDERLARLLAQVPDDELPATLANLGGHDVSEL HHHHHHCCHHEEEEEEECCCCCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHH LATLAAADAEPRRPTIIFAYTIKGWGLPIAGNPLNHSMLLSPEQIEALREQFAIPPGHEW HHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCC DRLPEDSPGGKLCAEAAKRLYGVATPPLSPPAIPLPDEITVPTSGTVSTQDTFGRFMVRL CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHH ADIAGLRERIVTASPDVSVSTNLAGWINKTGVFARREEPDFETEAYRMLRWRRWPGGQHI HHHHHHHHHHEECCCCCEEECCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEE ELGISEMNLFMLLGMFGIAGDLIGEPLIPIGTVYDPFVCRGLDAFIYGLYSGARFIVVGT EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC PSGITLSPEGGAHQSSVTASLGMELPQLASFEPCFALETAWLLHEALRLCLDPNGSASYL CCCEEECCCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE RLSTRPIDQSLLQPALDRFGTAELRRQVLRGGYRLIDRTDYRDQARSPLVHIVTSGVLVP EEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCHHHHCCCCEEHHHCCCHHH EAVSAAHYLQREGVAVNVINLTSARRVYEHWRHGDDLSWLFLPDERKAPIVTVHDAASHA HHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECHHHHH LAWLGSVFGVPLRAHGVDRFGQSGSRDDLYRAFHLDSMSIVESAFELVDEVYSG HHHHHHHHCCCHHHCCCHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]