| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is catE [H]
Identifier: 222526257
GI number: 222526257
Start: 3728929
End: 3729858
Strand: Reverse
Name: catE [H]
Synonym: Chy400_3021
Alternate gene names: 222526257
Gene position: 3729858-3728929 (Counterclockwise)
Preceding gene: 222526258
Following gene: 222526256
Centisome position: 70.79
GC content: 55.16
Gene sequence:
>930_bases ATGATAGCCGGCACGATTCACCCCGCCACGCATATCGGTACTGTAGCCCTCACCGTCACCAACCTTGAACGCTCACTGGC ATTTTATCAAAACCTGATTGGTCTGCGGCTTCATCAGCGTACTGCACAGACGGCTCATCTCGGCGTTGGTGGCCCTGATC TCTTGATCTTGTACGAACAACCGGCATACCGCCGCTACCGTGGCGTCTGCGGGCTGTACCACGTTGCAATTCTCGTTCCA AGCCGCTATGAACTGGCTCGTGCGCTGGCCCGTCTCTTTCGGGCACGTTATCCAAACGCACCAACCGATCACATCATGAC CAAAGCCACCTATCTTGACGACCCGGATGGCAATGGGATTGAAATCTATTGCGAGTCGCCAGAGGACGGTGTCTTTGTCA TGAACGATGACATCTTTTTTGCCCGTCGTGCAGACGGCAGTCTGAGCAACGGGCGTGAACCACTTGACGTAGCTGCATTA TTACGCCTGCTCTCACCCACCGACGATCTTGCCGCTCCTATGGCAGCGACAACCAGTATCGGGCATATTCATTTGCACGT GGCAGATATAGATGTTGCAGTAGACTTCTACCACCGACTGATCGGCTTCGATATTCAGGGCGTAATGCGCCGTTTTCAGA TGGCGATGGTCTCAGCCGGTGGCTACCATCACCATATCGGACTGAACACCTGGCAGGGCGAGGGTGCCCCCTCAGCACCA CCCGATGCCCTCGGTCTCCAGTGGTTTTCAATTGTTGTGCCCGATCAGAACGCACTGGCACCGATCCTTGCCCGTCTTCA CGACGCAGGGATCACCGAAGAAGCACATCCGGCAGGAAGGCTGCTGCATGATCCATTCCACAACCGGATTGTTCTCACCA CAAGAGAACAATTCCTGGCAAGTGCGTCGCACAGCAGCAATCTAACCTGA
Upstream 100 bases:
>100_bases TGAAGCGATTGAAGCACGACTACGCGAGCTGGAACGCGAATTATGTCGATTACGCGGCGAAGAGTAGAGGTACATTTCAG ATCAGCCAGGAGAAGACCTT
Downstream 100 bases:
>100_bases AAGACGCATCCACAAGAGCGCCCGTTTCCACGCGACACAGTTGGAACCACGTATGCAGCGTAGCGCCGCGTTCATATTTA ACGTGCGGTGTGTAGAAGTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MIAGTIHPATHIGTVALTVTNLERSLAFYQNLIGLRLHQRTAQTAHLGVGGPDLLILYEQPAYRRYRGVCGLYHVAILVP SRYELARALARLFRARYPNAPTDHIMTKATYLDDPDGNGIEIYCESPEDGVFVMNDDIFFARRADGSLSNGREPLDVAAL LRLLSPTDDLAAPMAATTSIGHIHLHVADIDVAVDFYHRLIGFDIQGVMRRFQMAMVSAGGYHHHIGLNTWQGEGAPSAP PDALGLQWFSIVVPDQNALAPILARLHDAGITEEAHPAGRLLHDPFHNRIVLTTREQFLASASHSSNLT
Sequences:
>Translated_309_residues MIAGTIHPATHIGTVALTVTNLERSLAFYQNLIGLRLHQRTAQTAHLGVGGPDLLILYEQPAYRRYRGVCGLYHVAILVP SRYELARALARLFRARYPNAPTDHIMTKATYLDDPDGNGIEIYCESPEDGVFVMNDDIFFARRADGSLSNGREPLDVAAL LRLLSPTDDLAAPMAATTSIGHIHLHVADIDVAVDFYHRLIGFDIQGVMRRFQMAMVSAGGYHHHIGLNTWQGEGAPSAP PDALGLQWFSIVVPDQNALAPILARLHDAGITEEAHPAGRLLHDPFHNRIVLTTREQFLASASHSSNLT >Mature_309_residues MIAGTIHPATHIGTVALTVTNLERSLAFYQNLIGLRLHQRTAQTAHLGVGGPDLLILYEQPAYRRYRGVCGLYHVAILVP SRYELARALARLFRARYPNAPTDHIMTKATYLDDPDGNGIEIYCESPEDGVFVMNDDIFFARRADGSLSNGREPLDVAAL LRLLSPTDDLAAPMAATTSIGHIHLHVADIDVAVDFYHRLIGFDIQGVMRRFQMAMVSAGGYHHHIGLNTWQGEGAPSAP PDALGLQWFSIVVPDQNALAPILARLHDAGITEEAHPAGRLLHDPFHNRIVLTTREQFLASASHSSNLT
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 33915; Mature: 33915
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAGTIHPATHIGTVALTVTNLERSLAFYQNLIGLRLHQRTAQTAHLGVGGPDLLILYEQ CCCCCCCCHHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECC PAYRRYRGVCGLYHVAILVPSRYELARALARLFRARYPNAPTDHIMTKATYLDDPDGNGI CHHHHHHHHHHHEEEEHCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCCE EIYCESPEDGVFVMNDDIFFARRADGSLSNGREPLDVAALLRLLSPTDDLAAPMAATTSI EEEEECCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHCCC GHIHLHVADIDVAVDFYHRLIGFDIQGVMRRFQMAMVSAGGYHHHIGLNTWQGEGAPSAP CEEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCC PDALGLQWFSIVVPDQNALAPILARLHDAGITEEAHPAGRLLHDPFHNRIVLTTREQFLA CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEHHHHHH SASHSSNLT HCCCCCCCC >Mature Secondary Structure MIAGTIHPATHIGTVALTVTNLERSLAFYQNLIGLRLHQRTAQTAHLGVGGPDLLILYEQ CCCCCCCCHHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECC PAYRRYRGVCGLYHVAILVPSRYELARALARLFRARYPNAPTDHIMTKATYLDDPDGNGI CHHHHHHHHHHHEEEEHCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCCE EIYCESPEDGVFVMNDDIFFARRADGSLSNGREPLDVAALLRLLSPTDDLAAPMAATTSI EEEEECCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHCCHHHHCCC GHIHLHVADIDVAVDFYHRLIGFDIQGVMRRFQMAMVSAGGYHHHIGLNTWQGEGAPSAP CEEEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCCC PDALGLQWFSIVVPDQNALAPILARLHDAGITEEAHPAGRLLHDPFHNRIVLTTREQFLA CCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEHHHHHH SASHSSNLT HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]