| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yflP [H]
Identifier: 222526256
GI number: 222526256
Start: 3727567
End: 3728544
Strand: Reverse
Name: yflP [H]
Synonym: Chy400_3020
Alternate gene names: 222526256
Gene position: 3728544-3727567 (Counterclockwise)
Preceding gene: 222526257
Following gene: 222526255
Centisome position: 70.76
GC content: 56.65
Gene sequence:
>978_bases ATGCGTCGCGTTCTCCCGGTCATTCTGCTCATAGCAATGCTGCTTAGCGCATGTGGCAACCAGGCTACCACTTCCTCTTC GTTTGAGTATCCAACTGAGGCGATTAACATTATGGCGCCGGCCTCCCCCGGCGGTGGTTGGGATAGTACTGCTCGTGCAA TGCAGGCGGCACTGGCCGCGACTACCGGTCAGACTGTGCAGGTCTACAACGTGAGCGGCGCCGGCGGTACCATTGGTCTG GCGCAATTTGTGAATGAAGCCAAAGGCAAACCACACGAGTTGATGGTCGGCGGCCTGGTGATGGTTGGGGCAATTCAAAC CAACAAAGCACCGGTTAATCTGTCACAGGTCACCCCCATTGCGCTGCTCACTGCCGAAGCAGAGGCAATTGTTGTGCCTG CCGACTCGAAGTATCAGACCCTGCAAGAACTCATCGCTGACTTCAAGGCCAATCCGACAGCCATTTCGTGGGGTGGCGGA TCGGCTGGCGGTACCGATCACATTCTGGTTGGTCTGATTGCTAAAGCTGTCGGCGTCGCCCCGGCGAATGTCAACTACAT TGCCTATTCGGGTGGTGGTGAAGCGACCGCAGCGATTCTCTCCGGTGCAGTGACAGCCGGTGTATCTGGCGTGTCAGAGT TTGCCGAGCAGGTTGCCGCCGGAACCATGCGTATGCTGGCGGTATCGAGTGAGGAACGGATTGCCGGTATCGATGCACCA ACCCTGAAAGAAGCCGGCGTCGATGTCGCATTAATGAACTGGCGCGCCGTGTTTGGTGCTCCCGACCTCACGCCTGAACA GCGGGCTGCCGTTATCGCCACCATCGAGAAGATGCACGCCAGCAAAGAGTGGCAAGACGCGCTTAGCAAAAATGGCTGGA CTGACTTCTTCCGCACCGGTGATGAATTCAGCACATTTTTGAATAATGAGATCACTCGTATTGGGGGCGTCCTGCGCGAT CTTGGGTTAGTGCAATGA
Upstream 100 bases:
>100_bases AACTTTTTCTGTTGACGCCAATCTCCGTCGAGAATATAATGGGGCAACTATTTTCCCATTGGGCACCCAGACAAATGCAC CTATCAGGAAAGGAGTTGCT
Downstream 100 bases:
>100_bases ATGCACCCACACGGGCACTGCTTTCGTTACGGCTGGCCGCATTAGCGGTGATTGGTCTGGGAGGGGTTATCCTCTCCCAG ATCACTCAGATAAGCGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRRVLPVILLIAMLLSACGNQATTSSSFEYPTEAINIMAPASPGGGWDSTARAMQAALAATTGQTVQVYNVSGAGGTIGL AQFVNEAKGKPHELMVGGLVMVGAIQTNKAPVNLSQVTPIALLTAEAEAIVVPADSKYQTLQELIADFKANPTAISWGGG SAGGTDHILVGLIAKAVGVAPANVNYIAYSGGGEATAAILSGAVTAGVSGVSEFAEQVAAGTMRMLAVSSEERIAGIDAP TLKEAGVDVALMNWRAVFGAPDLTPEQRAAVIATIEKMHASKEWQDALSKNGWTDFFRTGDEFSTFLNNEITRIGGVLRD LGLVQ
Sequences:
>Translated_325_residues MRRVLPVILLIAMLLSACGNQATTSSSFEYPTEAINIMAPASPGGGWDSTARAMQAALAATTGQTVQVYNVSGAGGTIGL AQFVNEAKGKPHELMVGGLVMVGAIQTNKAPVNLSQVTPIALLTAEAEAIVVPADSKYQTLQELIADFKANPTAISWGGG SAGGTDHILVGLIAKAVGVAPANVNYIAYSGGGEATAAILSGAVTAGVSGVSEFAEQVAAGTMRMLAVSSEERIAGIDAP TLKEAGVDVALMNWRAVFGAPDLTPEQRAAVIATIEKMHASKEWQDALSKNGWTDFFRTGDEFSTFLNNEITRIGGVLRD LGLVQ >Mature_325_residues MRRVLPVILLIAMLLSACGNQATTSSSFEYPTEAINIMAPASPGGGWDSTARAMQAALAATTGQTVQVYNVSGAGGTIGL AQFVNEAKGKPHELMVGGLVMVGAIQTNKAPVNLSQVTPIALLTAEAEAIVVPADSKYQTLQELIADFKANPTAISWGGG SAGGTDHILVGLIAKAVGVAPANVNYIAYSGGGEATAAILSGAVTAGVSGVSEFAEQVAAGTMRMLAVSSEERIAGIDAP TLKEAGVDVALMNWRAVFGAPDLTPEQRAAVIATIEKMHASKEWQDALSKNGWTDFFRTGDEFSTFLNNEITRIGGVLRD LGLVQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33533; Mature: 33533
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLPVILLIAMLLSACGNQATTSSSFEYPTEAINIMAPASPGGGWDSTARAMQAALAA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHH TTGQTVQVYNVSGAGGTIGLAQFVNEAKGKPHELMVGGLVMVGAIQTNKAPVNLSQVTPI CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHEEECCEEEEEEEECCCCCCCHHHCCCE ALLTAEAEAIVVPADSKYQTLQELIADFKANPTAISWGGGSAGGTDHILVGLIAKAVGVA EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC PANVNYIAYSGGGEATAAILSGAVTAGVSGVSEFAEQVAAGTMRMLAVSSEERIAGIDAP CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCC TLKEAGVDVALMNWRAVFGAPDLTPEQRAAVIATIEKMHASKEWQDALSKNGWTDFFRTG CHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCC DEFSTFLNNEITRIGGVLRDLGLVQ HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRVLPVILLIAMLLSACGNQATTSSSFEYPTEAINIMAPASPGGGWDSTARAMQAALAA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHH TTGQTVQVYNVSGAGGTIGLAQFVNEAKGKPHELMVGGLVMVGAIQTNKAPVNLSQVTPI CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHEEECCEEEEEEEECCCCCCCHHHCCCE ALLTAEAEAIVVPADSKYQTLQELIADFKANPTAISWGGGSAGGTDHILVGLIAKAVGVA EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCC PANVNYIAYSGGGEATAAILSGAVTAGVSGVSEFAEQVAAGTMRMLAVSSEERIAGIDAP CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCC TLKEAGVDVALMNWRAVFGAPDLTPEQRAAVIATIEKMHASKEWQDALSKNGWTDFFRTG CHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCC DEFSTFLNNEITRIGGVLRDLGLVQ HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]