| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526251
Identifier: 222526251
GI number: 222526251
Start: 3723295
End: 3723645
Strand: Reverse
Name: 222526251
Synonym: Chy400_3015
Alternate gene names: NA
Gene position: 3723645-3723295 (Counterclockwise)
Preceding gene: 222526252
Following gene: 222526250
Centisome position: 70.67
GC content: 60.97
Gene sequence:
>351_bases ATGCTTTGGCGAGCCAGAGGCTCGCGCTCCCAACGCTGCCGCTATGCATTACCCACAACTGATGTTAACCATGTGCGTAG CAGCGGGAATGATCGCCATGGGTGGTGTTTTAGGCGACTGGCCCAGTGGCAGTGCGCTGCTCCAGCCGTGCTATCACGTG CTGAATGGGTTGCCTTACACGCGCATCATGCGCGTGTCGCACGGTGTGGAGTGCGGCAGCCATGCTGCCGCGCTAGCCGT ACACACGATCCGGCGCGTGGCATACCGTTACCCATCCTGGTCACGAGGGTGCTGAATGTGCTCGTGCCGATCATCGAGTC GATCAGGCATGCATGCGACACCTGCGCGTAG
Upstream 100 bases:
>100_bases AGGCTGGGGGCGGGGGCACGCGCTCGACCTCCTCACCCCAGCGAGGGGAGGTTGGGAGAGGGACGAGATCACACCCCCAC CCCCGCTGGAGGCGGAGGCA
Downstream 100 bases:
>100_bases ACGGTTATGTTGCAAGAGATTCGTGCCTGCGTACCAGCGGCCACGGCCAGCCCCTGCCGGCGGTGGTGAGGATGCATCCA CGCAGGCTGGAAGCCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLWRARGSRSQRCRYALPTTDVNHVRSSGNDRHGWCFRRLAQWQCAAPAVLSRAEWVALHAHHARVARCGVRQPCCRASR THDPARGIPLPILVTRVLNVLVPIIESIRHACDTCA
Sequences:
>Translated_116_residues MLWRARGSRSQRCRYALPTTDVNHVRSSGNDRHGWCFRRLAQWQCAAPAVLSRAEWVALHAHHARVARCGVRQPCCRASR THDPARGIPLPILVTRVLNVLVPIIESIRHACDTCA >Mature_116_residues MLWRARGSRSQRCRYALPTTDVNHVRSSGNDRHGWCFRRLAQWQCAAPAVLSRAEWVALHAHHARVARCGVRQPCCRASR THDPARGIPLPILVTRVLNVLVPIIESIRHACDTCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13096; Mature: 13096
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWRARGSRSQRCRYALPTTDVNHVRSSGNDRHGWCFRRLAQWQCAAPAVLSRAEWVALH CCCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH AHHARVARCGVRQPCCRASRTHDPARGIPLPILVTRVLNVLVPIIESIRHACDTCA HHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLWRARGSRSQRCRYALPTTDVNHVRSSGNDRHGWCFRRLAQWQCAAPAVLSRAEWVALH CCCCCCCCCCCCCEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH AHHARVARCGVRQPCCRASRTHDPARGIPLPILVTRVLNVLVPIIESIRHACDTCA HHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA