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The map label for this gene is crtB [H]

Identifier: 222526144

GI number: 222526144

Start: 3585016

End: 3586023

Strand: Reverse

Name: crtB [H]

Synonym: Chy400_2901

Alternate gene names: 222526144

Gene position: 3586023-3585016 (Counterclockwise)

Preceding gene: 222526145

Following gene: 222526143

Centisome position: 68.06

GC content: 57.54

Gene sequence:

>1008_bases
GTGTCGCTGAATTCACTCACGATCTTTTCGCGAGGTAATAGTTTGCCGGTGAACCAGGCGCTACCGGCTGAAGAGCAGCT
TGCCCAACTCCTCCGTCTTAACGAACTTCCTGTATCGCCTCACGCCGATGAATTGCCGCCACCGCCGGGCCGCACGCTGG
CCGAGGCTTACGCGATCTGCGAACAAATCATTCGTCGTCATTCTAAGAGCTTTTTCTTCAGCACCCAGTTTCTACCGCCG
GCACAGCGGCGAGCCGTGCGCGCCCTGTATGCCTTCTGTCGGACAACTGACGATACGGTTGACATGGCCGAGTCGGACCC
GGCGCGTGCTCTGGCCGAATGGGTGCGCATTGCGCGCCGACCACGGTTTGACACCTCACACCCGGTGTTGTTGGCCTGGG
CCGATACCTGTCAGCGCTACAATCTTGCCCCGAGTTTGATTGATGAGTTGCTGGCCGGTGTGGCGATGGATCTCACGATT
TCGCGCTATACCACGTTTGCCGATCTCTGGCTCTACTGCTATCGGGTGGCTTCAGTGGTTGGATTGCTGGTGATCGGGAT
TACCGGCGCTGCACCCGGCGCCCAGCCTTACGCGATCAAGCTCGGTGTCGCTTTGCAGCTCACCAATATTCTGCGCGATA
TTGGCGAAGATGCCGACCGCCAGCGCGTCTATTTGCCCGAAGATGAGCTGGCACGGTTTGGTTTGACTGCCGATGATATT
CTGGCCCGTGTGTACGACGAGCGGTTTATCAGGTTGATGAAGTTCCAGATTGCACGTGCCCGGCAATTGTACGCCGAGAG
CTGGCCAGGTATTGCTCTGCTGCCACCAGAGGTGCGACTGGCGATTGCCGCCGCAGCCCGGGTGTATAGCGGTATTCTCG
ATAAAATAGAACAAAACCAATACGACTCATACACCCGCCGGGCCTATGTGCCGTTACGCGAGAAGATTGCGCGTTTGCCG
GGTATCTGGTGGGATGTGCGTGGTTTGACGAAGAAGTTATCGCGGTAA

Upstream 100 bases:

>100_bases
TCACCATGTCCTGGCTGATAATGCGTAACTCAGTATTGCCTTCAAGCTCAATATTGCGTATAGTAAAAACAAGCGTAATA
TGTGACAAAAGGAGTGTGGT

Downstream 100 bases:

>100_bases
CAGTACGCTGTCCTCTTCGTGAATGCACCGGTGTTTGATCTTCTGGTACAATACAATCAGTTTTGCCCGCCGAGATCAAA
TCTGACACGCCGAAATGGAC

Product: Squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSLNSLTIFSRGNSLPVNQALPAEEQLAQLLRLNELPVSPHADELPPPPGRTLAEAYAICEQIIRRHSKSFFFSTQFLPP
AQRRAVRALYAFCRTTDDTVDMAESDPARALAEWVRIARRPRFDTSHPVLLAWADTCQRYNLAPSLIDELLAGVAMDLTI
SRYTTFADLWLYCYRVASVVGLLVIGITGAAPGAQPYAIKLGVALQLTNILRDIGEDADRQRVYLPEDELARFGLTADDI
LARVYDERFIRLMKFQIARARQLYAESWPGIALLPPEVRLAIAAAARVYSGILDKIEQNQYDSYTRRAYVPLREKIARLP
GIWWDVRGLTKKLSR

Sequences:

>Translated_335_residues
MSLNSLTIFSRGNSLPVNQALPAEEQLAQLLRLNELPVSPHADELPPPPGRTLAEAYAICEQIIRRHSKSFFFSTQFLPP
AQRRAVRALYAFCRTTDDTVDMAESDPARALAEWVRIARRPRFDTSHPVLLAWADTCQRYNLAPSLIDELLAGVAMDLTI
SRYTTFADLWLYCYRVASVVGLLVIGITGAAPGAQPYAIKLGVALQLTNILRDIGEDADRQRVYLPEDELARFGLTADDI
LARVYDERFIRLMKFQIARARQLYAESWPGIALLPPEVRLAIAAAARVYSGILDKIEQNQYDSYTRRAYVPLREKIARLP
GIWWDVRGLTKKLSR
>Mature_334_residues
SLNSLTIFSRGNSLPVNQALPAEEQLAQLLRLNELPVSPHADELPPPPGRTLAEAYAICEQIIRRHSKSFFFSTQFLPPA
QRRAVRALYAFCRTTDDTVDMAESDPARALAEWVRIARRPRFDTSHPVLLAWADTCQRYNLAPSLIDELLAGVAMDLTIS
RYTTFADLWLYCYRVASVVGLLVIGITGAAPGAQPYAIKLGVALQLTNILRDIGEDADRQRVYLPEDELARFGLTADDIL
ARVYDERFIRLMKFQIARARQLYAESWPGIALLPPEVRLAIAAAARVYSGILDKIEQNQYDSYTRRAYVPLREKIARLPG
IWWDVRGLTKKLSR

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 37801; Mature: 37670

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNSLTIFSRGNSLPVNQALPAEEQLAQLLRLNELPVSPHADELPPPPGRTLAEAYAIC
CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
EQIIRRHSKSFFFSTQFLPPAQRRAVRALYAFCRTTDDTVDMAESDPARALAEWVRIARR
HHHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHC
PRFDTSHPVLLAWADTCQRYNLAPSLIDELLAGVAMDLTISRYTTFADLWLYCYRVASVV
CCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLVIGITGAAPGAQPYAIKLGVALQLTNILRDIGEDADRQRVYLPEDELARFGLTADDI
HHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCHHHH
LARVYDERFIRLMKFQIARARQLYAESWPGIALLPPEVRLAIAAAARVYSGILDKIEQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
YDSYTRRAYVPLREKIARLPGIWWDVRGLTKKLSR
HHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHCC
>Mature Secondary Structure 
SLNSLTIFSRGNSLPVNQALPAEEQLAQLLRLNELPVSPHADELPPPPGRTLAEAYAIC
CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
EQIIRRHSKSFFFSTQFLPPAQRRAVRALYAFCRTTDDTVDMAESDPARALAEWVRIARR
HHHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHC
PRFDTSHPVLLAWADTCQRYNLAPSLIDELLAGVAMDLTISRYTTFADLWLYCYRVASVV
CCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLVIGITGAAPGAQPYAIKLGVALQLTNILRDIGEDADRQRVYLPEDELARFGLTADDI
HHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCHHHH
LARVYDERFIRLMKFQIARARQLYAESWPGIALLPPEVRLAIAAAARVYSGILDKIEQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
YDSYTRRAYVPLREKIARLPGIWWDVRGLTKKLSR
HHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA