Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is yueF [H]

Identifier: 222526116

GI number: 222526116

Start: 3558412

End: 3559710

Strand: Direct

Name: yueF [H]

Synonym: Chy400_2873

Alternate gene names: 222526116

Gene position: 3558412-3559710 (Clockwise)

Preceding gene: 222526115

Following gene: 222526118

Centisome position: 67.54

GC content: 56.43

Gene sequence:

>1299_bases
ATGAGTATTCTGACCCCTGCGTTCCTCCGTCAGGCTGCCCGCTGGCTGCTGATTGGTTTTTCAATTTACCTCATCGGCTG
GCTGCTGTCGGCGGCAGGGTCGGCAGTAACGCCATTTATTTTCGGTGGTGTACTGGCCTACCTCTTTTTGCCGCTGGTGA
ATTTCTTCAACCGGTGGCTGCCCCGCTGGCTGGCTATTTTGACGGTGTACCTGCTCACGTTTGGGGCAATTGTGGCTGCC
ATTGCCTTCGTCGTGCCGCCACTGATTGCTCAGATCACGGAGTTGATCCGTGCTCTCCCAGATATTGCCACGATCCAGCG
TGAAGCCAACCGGTTGATCGATGAGTATGAGCAGTTACTTGCCAGCCTGCCCCCAGCATTGCAAGCGGAAGTGCAGAGTG
CAATTGCTTCCGCAACCGCTGAAGGGCTAAGCACGCTACGGGCCAATTTTGTCAGTTATCTGCAGGGTGTTGGCCAGTTT
TTGGTGAACAGTGTCCTTTCAGTGGTCAACACAGTTACCTTTTTGCTCGGTTTCTTCCTGGTTCCGTTCTGGCTTTTCTA
TGTGCTGATGGATCAACGAGCCGGGCGAGCCTACCTGGATCGGATGATTCACCCCCGTCTGCGTGCCGATTTTTGGGCCA
TGGTGACAATTATCGATCACGATCTGAGTGGCTATCTCCGTGGGCAGTTGATCCTCGGTACATCGGTTGGACTGGCGGCC
TGGATCGGCCTTACGGCCTTGAATATGGCCGGGATGAATATTCCGTATACCGTGTTACTGGCAGTGGTTGCCGGCGTTAC
CGAACTGGTGCCGGTGATCGGGCCGATCATCGGTGCTATTCCGGCAATCTTGCTCGGTCTGGCCGATTCACCGACGACAG
CGCTGGCCGTGACGATACTCTATATTGCGATTCAGCAGCTTGAAAACCATATCCTGGTTCCTCGTATCATTGGTGAGAGT
GTGGGCGTGCATCCGGCGATTTTGATGGTTGTCCTGGTAGTGTGCTCGCAGGTGTTCGGGTTACTGGGAGCCATTCTTTC
GGCACCGCTCAGCGCAATGGCGCGTGACCTCTTCCTGTATCTGTACGGTCGCCTGAGCGATCCGCCGCGCCCTGCCGGTG
TGTTGCCTGAACGACTACGTCCGTTTGTCACCCCAATTGAGGTGCCGCAAACGCCTTCACCATCCCCGGCCCAATCGCCA
ACCTCTGAGTCGTCATCGGCGCGGACAGCGCCATTATCTGATCCATCACCTACCGACGCTCCGTCGCCGCCCTCGGCGGC
TGGTGATCAGCTATCGTGA

Upstream 100 bases:

>100_bases
GCGTATAGCTGGACGAATACCGGCCATTCGATTGCGACTATGCTAACGGTCAGTACTCTCAATCCACGTGATGAGCGCTG
ACACGTTTTGGTGAGGTTTC

Downstream 100 bases:

>100_bases
GTGGCCCGGCGGGTTAAAACCCTGCCTCAATACGTGGAAGCTGGCAAGGCTGGCCTGGCGGCGGGGGTGGATCGGGCGTG
CTGGATAGCCCCGTAGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSILTPAFLRQAARWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWLPRWLAILTVYLLTFGAIVAA
IAFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLLASLPPALQAEVQSAIASATAEGLSTLRANFVSYLQGVGQF
LVNSVLSVVNTVTFLLGFFLVPFWLFYVLMDQRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAA
WIGLTALNMAGMNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAIQQLENHILVPRIIGES
VGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLYLYGRLSDPPRPAGVLPERLRPFVTPIEVPQTPSPSPAQSP
TSESSSARTAPLSDPSPTDAPSPPSAAGDQLS

Sequences:

>Translated_432_residues
MSILTPAFLRQAARWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWLPRWLAILTVYLLTFGAIVAA
IAFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLLASLPPALQAEVQSAIASATAEGLSTLRANFVSYLQGVGQF
LVNSVLSVVNTVTFLLGFFLVPFWLFYVLMDQRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAA
WIGLTALNMAGMNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAIQQLENHILVPRIIGES
VGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLYLYGRLSDPPRPAGVLPERLRPFVTPIEVPQTPSPSPAQSP
TSESSSARTAPLSDPSPTDAPSPPSAAGDQLS
>Mature_431_residues
SILTPAFLRQAARWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWLPRWLAILTVYLLTFGAIVAAI
AFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLLASLPPALQAEVQSAIASATAEGLSTLRANFVSYLQGVGQFL
VNSVLSVVNTVTFLLGFFLVPFWLFYVLMDQRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAAW
IGLTALNMAGMNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTILYIAIQQLENHILVPRIIGESV
GVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLYLYGRLSDPPRPAGVLPERLRPFVTPIEVPQTPSPSPAQSPT
SESSSARTAPLSDPSPTDAPSPPSAAGDQLS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=298, Percent_Identity=27.1812080536913, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082271, Length=356, Percent_Identity=24.438202247191, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 46352; Mature: 46221

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILTPAFLRQAARWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PRWLAILTVYLLTFGAIVAAIAFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ASLPPALQAEVQSAIASATAEGLSTLRANFVSYLQGVGQFLVNSVLSVVNTVTFLLGFFL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPFWLFYVLMDQRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAA
HHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHEECCHHHHHH
WIGLTALNMAGMNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YIAIQQLENHILVPRIIGESVGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLY
HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGRLSDPPRPAGVLPERLRPFVTPIEVPQTPSPSPAQSPTSESSSARTAPLSDPSPTDA
HHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSPPSAAGDQLS
CCCCCCCCCCCC
>Mature Secondary Structure 
SILTPAFLRQAARWLLIGFSIYLIGWLLSAAGSAVTPFIFGGVLAYLFLPLVNFFNRWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
PRWLAILTVYLLTFGAIVAAIAFVVPPLIAQITELIRALPDIATIQREANRLIDEYEQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ASLPPALQAEVQSAIASATAEGLSTLRANFVSYLQGVGQFLVNSVLSVVNTVTFLLGFFL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPFWLFYVLMDQRAGRAYLDRMIHPRLRADFWAMVTIIDHDLSGYLRGQLILGTSVGLAA
HHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHEECCHHHHHH
WIGLTALNMAGMNIPYTVLLAVVAGVTELVPVIGPIIGAIPAILLGLADSPTTALAVTIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YIAIQQLENHILVPRIIGESVGVHPAILMVVLVVCSQVFGLLGAILSAPLSAMARDLFLY
HHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGRLSDPPRPAGVLPERLRPFVTPIEVPQTPSPSPAQSPTSESSSARTAPLSDPSPTDA
HHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSPPSAAGDQLS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]