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The map label for this gene is clpS [H]

Identifier: 222526063

GI number: 222526063

Start: 3477327

End: 3477653

Strand: Reverse

Name: clpS [H]

Synonym: Chy400_2820

Alternate gene names: 222526063

Gene position: 3477653-3477327 (Counterclockwise)

Preceding gene: 222526064

Following gene: 222526062

Centisome position: 66.0

GC content: 54.43

Gene sequence:

>327_bases
ATGTCAACTGAACAACCAGCAGTCACCGTGCGGCCTGCCGTCTCATTTGCGGTTGCCAGCGATGAGGAACTTGAACGGCC
GTACCGGGTTATTGTTCAGAACGACGACGTGACTCCCATGGATTTTGTCGTCATCGTGTTGCGTGTCTTTTTCGGGCTTG
ATCTGGCCCGTGCCGAACAGGTGATGCTTACTGCCCATTATGAAGGGCGTGCGCTGGTAACGGTACTCCCGTTGCAAGAA
GCGCAAGAGCGTGTCTATCAGGCTCATCATGCAGCCCGCGAGGCCGGCTACCCGTTAACCTTTTATCTTGAGCCTGATGA
ACAGTAA

Upstream 100 bases:

>100_bases
ACTACTGGCAGCGAAACGACGCCGTCGCCGGGATGAGTGATGCTTTATGCTATACTGCCAGAAGGATTTGATGGTACAAC
AGTAGTTGACGGAGGAGCCC

Downstream 100 bases:

>100_bases
CGTTTCCGACCTGGTACATGCGTCCCGCATTTTGAAAGATGGAGTTTTGCCCAACTATGAATCTCCGGCCCCGTTTGTTT
GCCATTGCCCTGATTTGCAT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSTEQPAVTVRPAVSFAVASDEELERPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTVLPLQE
AQERVYQAHHAAREAGYPLTFYLEPDEQ

Sequences:

>Translated_108_residues
MSTEQPAVTVRPAVSFAVASDEELERPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTVLPLQE
AQERVYQAHHAAREAGYPLTFYLEPDEQ
>Mature_107_residues
STEQPAVTVRPAVSFAVASDEELERPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQVMLTAHYEGRALVTVLPLQEA
QERVYQAHHAAREAGYPLTFYLEPDEQ

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=77, Percent_Identity=45.4545454545455, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 12234; Mature: 12103

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEQPAVTVRPAVSFAVASDEELERPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQ
CCCCCCCEEECCCEEEEECCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCE
VMLTAHYEGRALVTVLPLQEAQERVYQAHHAAREAGYPLTFYLEPDEQ
EEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure 
STEQPAVTVRPAVSFAVASDEELERPYRVIVQNDDVTPMDFVVIVLRVFFGLDLARAEQ
CCCCCCEEECCCEEEEECCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCE
VMLTAHYEGRALVTVLPLQEAQERVYQAHHAAREAGYPLTFYLEPDEQ
EEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA