| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526062
Identifier: 222526062
GI number: 222526062
Start: 3475750
End: 3477270
Strand: Reverse
Name: 222526062
Synonym: Chy400_2819
Alternate gene names: NA
Gene position: 3477270-3475750 (Counterclockwise)
Preceding gene: 222526063
Following gene: 222526061
Centisome position: 66.0
GC content: 58.12
Gene sequence:
>1521_bases ATGAATCTCCGGCCCCGTTTGTTTGCCATTGCCCTGATTTGCATGGCTTTCATTGCCGGGTGTACATCAACACCTCGTGC TTCAATGCCCTCTGAACCGGTGCTGGCTGCTGCGCCGACGCAACCGGTGATCCCTACCCCGCTTCCGACACCTGTACCGG TCTACGCCGACGGCACTGAAGTTGCCGGTGTGCCGATTGGTGGCTTGACGGTTGCAGAGGCAGAAGCAGCACTGAGCAGT GCGCTGTCGGCGAGGGTAACGCCGCTGCGACTGGTTGCCGGTGCATATACGCAGACAATTGAGCCGACGGCAATTAATCT GCACGCCGACCCGGCTGCATTGCTGGCTGCGGCAGCGCCGGCGTTGGGGAGTAGTACGCCGGTACGTGTACCACTCCAGC TTAGCTTCGATGAAACAGCCCTCCGTGAGCAGATGACGACGTTTGCTGCCGAGTCGGCTCTGCCACCCCAGGTCACAGTT ATCACGTCAACTGACGTGTTGTCACGGAGCTTTGCCTACATTCCCGGCCGGGCGATTGATCTCGACCGCTCGCTGGAGAT TGTGAGCGGCTTGCTACGCCGTGGACGGGCAACCGAACCGATTGCGCTGACTCTTTGGCCGACTACCGAACAGCCGCGTG CTTCGCTTGAACAACTTACCACCCAGCTCGAAGAAATGGCTGAGGCATGGGATGGTGTGGCTGGGGTTTATCTGTATGAT CTCGCCACCGGCGCTGAAGTCGCGGTGAATGCGCGCAGTGTCTTCCCCGGCGCCAGCACGATCAAGACGGCTATTATGCT CTATGCCTACACGAAACTTGAAACCTTTACCGAACGCCAGTGGCGGCGCATGCGCCTCATGATCATCGAGAGTGACAACC TGGCGGCAAATGACATACTGGCTGCCGGCGCCGGTGGTACCGGTACCGATCTAGCATTTCGCGGTGCCGAAGAGATGAGT GATATGCTGGCCGATCTTGGTCTGGAATATCTCTATCTCTACGTCCCTTACGAGTCGACCGATTACATCCGGCTGTACAA CGTCAGGTATCGCTGTGGGCCAAGAGACCCGGTCGGCGAGCCGCCGTATACCGAGACCGGTTGCGCACTGCGGGCAACTC CTTACGCTATCGGGCAGATCTACCGCATGATTGACGAGTGTGCACGCGGTGAAGGTGTGCTGCTTGAGAAATTTGAACTG CTCAATCCAGATCGATGTCAGGAGATGCTCGACTTGCTGGCTGAGAATGGCGACAATAGCCGGATGGTTGCCGGTCTGCC AGAGGGAGTACGGGTCGAGCACAAATCGGGATGGATTGACAACACCCAGGCTGATGCCGGGATTGTACGCTCACCCGGTG GTGATTATGTGTTGGCCGTGTACGTCTACAAGCCACTGGGAGATCGGGCAGCCTGGCCCGACTCGCTGCTCGGCGGAGCA ATTGCCGATTTCAGCCGTCTTGTGTACACTGCCTACAATCCAATTCAAATTGATCCGGCTTCACAGGGAGACACACCATG A
Upstream 100 bases:
>100_bases CCGGCTACCCGTTAACCTTTTATCTTGAGCCTGATGAACAGTAACGTTTCCGACCTGGTACATGCGTCCCGCATTTTGAA AGATGGAGTTTTGCCCAACT
Downstream 100 bases:
>100_bases CCGGTCTACCCATCAAGCGCATGGTGCTCTACAAACACGGTGTTGGCTATTTTGAACGACAGGGCACCTTCAGCGGTGAC ACCTTAACGCTCACCTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTEVAGVPIGGLTVAEAEAALSS ALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAPALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTV ITSTDVLSRSFAYIPGRAIDLDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDILAAGAGGTGTDLAFRGAEEMS DMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGEPPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFEL LNPDRCQEMLDLLAENGDNSRMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA IADFSRLVYTAYNPIQIDPASQGDTP
Sequences:
>Translated_506_residues MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTEVAGVPIGGLTVAEAEAALSS ALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAPALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTV ITSTDVLSRSFAYIPGRAIDLDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDILAAGAGGTGTDLAFRGAEEMS DMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGEPPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFEL LNPDRCQEMLDLLAENGDNSRMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA IADFSRLVYTAYNPIQIDPASQGDTP >Mature_506_residues MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTEVAGVPIGGLTVAEAEAALSS ALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAPALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTV ITSTDVLSRSFAYIPGRAIDLDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDILAAGAGGTGTDLAFRGAEEMS DMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGEPPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFEL LNPDRCQEMLDLLAENGDNSRMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA IADFSRLVYTAYNPIQIDPASQGDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54371; Mature: 54371
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTE CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCE VAGVPIGGLTVAEAEAALSSALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAP ECCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCC ALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTVITSTDVLSRSFAYIPGRAID CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEC LDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDIL ECCCCEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEE AAGAGGTGTDLAFRGAEEMSDMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGE EECCCCCCCCCEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCC PPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFELLNPDRCQEMLDLLAENGDNS CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCC RMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA EEEECCCCCCEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHH IADFSRLVYTAYNPIQIDPASQGDTP HHHHHHHHHEECCCEEECCCCCCCCC >Mature Secondary Structure MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTE CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCE VAGVPIGGLTVAEAEAALSSALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAP ECCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCC ALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTVITSTDVLSRSFAYIPGRAID CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEC LDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDIL ECCCCEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEE AAGAGGTGTDLAFRGAEEMSDMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGE EECCCCCCCCCEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCC PPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFELLNPDRCQEMLDLLAENGDNS CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCC RMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA EEEECCCCCCEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHH IADFSRLVYTAYNPIQIDPASQGDTP HHHHHHHHHEECCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA