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The map label for this gene is cbiD [H]

Identifier: 222526020

GI number: 222526020

Start: 3421288

End: 3422520

Strand: Reverse

Name: cbiD [H]

Synonym: Chy400_2776

Alternate gene names: 222526020

Gene position: 3422520-3421288 (Counterclockwise)

Preceding gene: 222526021

Following gene: 222526019

Centisome position: 64.96

GC content: 60.67

Gene sequence:

>1233_bases
ATGGCCGATATGGTTCCGCCACGCAACAAACGAGGGTCGCGTACCGGTTACACCACCGGCAGCAATGCGGCAGCAGCAGC
CAAAGCAGCCACCATTGCGCTGCTAAGCGGGCACTGGCCGGATCAGGTCACGATCACCTTGCCGATTGGCGAGACGGCCA
CCATGACACCGGCGGTCACCCGCCTCGATGCCGAACAGGCGTACTGCTGCATGGTGAAAGATGCCGGCGACGATCCTGAT
GTGACCCACGGTGCCCTGATCTGTGCGTTGGTGCGCATTGTGGAAACGCCGGGAATCCACCTGGATGGTGGCGAAGGCGT
TGGGCGAGTCACCTTGCCCGGCCTCGGCTTACCGGTCGGTGGGCCGGCCATCAATCCGGTACCGCGTCAGCAGATCACGG
CGAATGTGCTCGACGCCGTGCGCGAATATGCTCCCGGCGGCGAAGCCTTTCTGGAACGCCTGGGGCTTGAGGTCATCATC
AGCGTGCCTGATGGTGAACGGATTGCGCAAAAGACCCTCAATCCGCGTCTCGGCATCATCGGCGGGATCAGTATTCTCGG
CACGACCGGTAAAGTCTTTCCGTACAGCACTGCCGCCTGGCGCGCGAGTGTCATTCAGGCGGTTGAGATGGCTGCCCGCA
ACGCCGTTCCCAAAATTGTTTTATGCACCGGCGGTCGATCAGAAAAGTTTGCCATGCAACTCTTCCCTGAATTGCCAGAG
CTTGCGTTTGTCGAATTGAGTGTCTTTACCGGTGATGCTCTCAAGACCTGTGTCACGCACGGCGTACCGGCGGCAGTCTT
CGTCGGCATGATCGGCAAGATGATCAAAACAGCGCAGGGGCATATGCAGACCCACGTGGCGGGCAATCAGGTTGATTTTG
CCTTCCTGGCCCAGGTATGCCGTGATGTCGGCGCACCAGAGTCATTTGTGCAGGCGGTCGCACAGGCCAATACCGGTCGC
CATTTCCTCGAACTCTGCCAGGAGCATGGCCAACTGGCACCGCTGCAACGGATCGTCGAACTGGCCCGCGATCAGTGCCT
GCGCTTCATCGCCGATCACGGCGGTGCGATGGACTTCGAGGCCATTCTGGTCGATTTCGATGGTCGGGTATTGGCACGGG
CAGCAGCTACAGCACCGGCGCATACCAGACCGGCGTCGCTGCCGGCACCGCTGATCGAGCGTCTACCCAACGATCCGTTG
CCTGAAACTGATGAGCCGGTGGAGGATGCATGA

Upstream 100 bases:

>100_bases
CATGGGGCGCAAGGGTGGCTCACCGGTTGCCACAGCCACCGTGAATGCCCTGCTCCGCCTGGCAACCGGTGAAGACAACA
GCGCGTAACGGAGATCAACT

Downstream 100 bases:

>100_bases
GTCGACGCACGCCCATTCTTGTGGTTGGATTGACGGCTGCCGGCAGCGACGGTCTGTCATCCGCGCTGATCGAGCGCGTG
CTCCGCGCCGATCTGCTGGT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MADMVPPRNKRGSRTGYTTGSNAAAAAKAATIALLSGHWPDQVTITLPIGETATMTPAVTRLDAEQAYCCMVKDAGDDPD
VTHGALICALVRIVETPGIHLDGGEGVGRVTLPGLGLPVGGPAINPVPRQQITANVLDAVREYAPGGEAFLERLGLEVII
SVPDGERIAQKTLNPRLGIIGGISILGTTGKVFPYSTAAWRASVIQAVEMAARNAVPKIVLCTGGRSEKFAMQLFPELPE
LAFVELSVFTGDALKTCVTHGVPAAVFVGMIGKMIKTAQGHMQTHVAGNQVDFAFLAQVCRDVGAPESFVQAVAQANTGR
HFLELCQEHGQLAPLQRIVELARDQCLRFIADHGGAMDFEAILVDFDGRVLARAAATAPAHTRPASLPAPLIERLPNDPL
PETDEPVEDA

Sequences:

>Translated_410_residues
MADMVPPRNKRGSRTGYTTGSNAAAAAKAATIALLSGHWPDQVTITLPIGETATMTPAVTRLDAEQAYCCMVKDAGDDPD
VTHGALICALVRIVETPGIHLDGGEGVGRVTLPGLGLPVGGPAINPVPRQQITANVLDAVREYAPGGEAFLERLGLEVII
SVPDGERIAQKTLNPRLGIIGGISILGTTGKVFPYSTAAWRASVIQAVEMAARNAVPKIVLCTGGRSEKFAMQLFPELPE
LAFVELSVFTGDALKTCVTHGVPAAVFVGMIGKMIKTAQGHMQTHVAGNQVDFAFLAQVCRDVGAPESFVQAVAQANTGR
HFLELCQEHGQLAPLQRIVELARDQCLRFIADHGGAMDFEAILVDFDGRVLARAAATAPAHTRPASLPAPLIERLPNDPL
PETDEPVEDA
>Mature_409_residues
ADMVPPRNKRGSRTGYTTGSNAAAAAKAATIALLSGHWPDQVTITLPIGETATMTPAVTRLDAEQAYCCMVKDAGDDPDV
THGALICALVRIVETPGIHLDGGEGVGRVTLPGLGLPVGGPAINPVPRQQITANVLDAVREYAPGGEAFLERLGLEVIIS
VPDGERIAQKTLNPRLGIIGGISILGTTGKVFPYSTAAWRASVIQAVEMAARNAVPKIVLCTGGRSEKFAMQLFPELPEL
AFVELSVFTGDALKTCVTHGVPAAVFVGMIGKMIKTAQGHMQTHVAGNQVDFAFLAQVCRDVGAPESFVQAVAQANTGRH
FLELCQEHGQLAPLQRIVELARDQCLRFIADHGGAMDFEAILVDFDGRVLARAAATAPAHTRPASLPAPLIERLPNDPLP
ETDEPVEDA

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 43231; Mature: 43100

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMVPPRNKRGSRTGYTTGSNAAAAAKAATIALLSGHWPDQVTITLPIGETATMTPAVT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEECCCCCCCCHHHH
RLDAEQAYCCMVKDAGDDPDVTHGALICALVRIVETPGIHLDGGEGVGRVTLPGLGLPVG
HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCC
GPAINPVPRQQITANVLDAVREYAPGGEAFLERLGLEVIISVPDGERIAQKTLNPRLGII
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCEE
GGISILGTTGKVFPYSTAAWRASVIQAVEMAARNAVPKIVLCTGGRSEKFAMQLFPELPE
ECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCC
LAFVELSVFTGDALKTCVTHGVPAAVFVGMIGKMIKTAQGHMQTHVAGNQVDFAFLAQVC
EEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RDVGAPESFVQAVAQANTGRHFLELCQEHGQLAPLQRIVELARDQCLRFIADHGGAMDFE
HHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
AILVDFDGRVLARAAATAPAHTRPASLPAPLIERLPNDPLPETDEPVEDA
EEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADMVPPRNKRGSRTGYTTGSNAAAAAKAATIALLSGHWPDQVTITLPIGETATMTPAVT
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCEEEEEECCCCCCCCHHHH
RLDAEQAYCCMVKDAGDDPDVTHGALICALVRIVETPGIHLDGGEGVGRVTLPGLGLPVG
HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCC
GPAINPVPRQQITANVLDAVREYAPGGEAFLERLGLEVIISVPDGERIAQKTLNPRLGII
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCEE
GGISILGTTGKVFPYSTAAWRASVIQAVEMAARNAVPKIVLCTGGRSEKFAMQLFPELPE
ECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCC
LAFVELSVFTGDALKTCVTHGVPAAVFVGMIGKMIKTAQGHMQTHVAGNQVDFAFLAQVC
EEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RDVGAPESFVQAVAQANTGRHFLELCQEHGQLAPLQRIVELARDQCLRFIADHGGAMDFE
HHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE
AILVDFDGRVLARAAATAPAHTRPASLPAPLIERLPNDPLPETDEPVEDA
EEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA