| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525989
Identifier: 222525989
GI number: 222525989
Start: 3383557
End: 3384963
Strand: Reverse
Name: 222525989
Synonym: Chy400_2745
Alternate gene names: NA
Gene position: 3384963-3383557 (Counterclockwise)
Preceding gene: 222525991
Following gene: 222525986
Centisome position: 64.24
GC content: 56.15
Gene sequence:
>1407_bases ATGAACTGTTTGGTAACTACGATTATGATCAGATTACGACTCTGGCTGATTGCCCTTGGCGCTCTCTGCGTCTTCTTAAG CGGGAGTGTAGCTCTTGCTCAACCCACGTGGGTCGAGCAGAGTACGACCCACTTTCGGATCATTTACACTCCTGATGATG CGACGATTGCAGACAGGTATGCTCCTATTATTGACGATCTCTATAACGAGCTTAGCACCATTTTTGAGTTTCGTCCGGTG ACGCCGCTCACCTTACGATTGTATCCTACCAGTAATGCGTACTTCGCCGCCAATCCGGCAGCCCGCAACGTTCCAGGGGT GATTGCCCATGCCGATTTTCGGCGTCGTGAAGTTGTGGTGATTGTCGAAAGGGCGCGATTACAGGATGAAGTCTCTCAGC TCAACAATCTACGCCACGAGTTGACCCATATCTTCGCTGCGGAATTGAGCGACGGCAAACTGAACGTGGGTTTGCAGGAA GGGATTGCGCAGTATATGGAGTTGCCGGGGCCGGATCGCGATGGTAAGCTGGCGATATTGCGTGCCCTCTGGCAACGGAA TGAGTTGTGGCCGTGGGCTGTGCTCGATGATCGAAATGCGATCTATGGTCAACCCGAATTGAGCTATCCACAGACCTGGT CAATCGTCACGTTTTTAATTGAGCGTGATGGTTTTGAGCGGTTCCGGCAATTTCTTACCACTCTGGCTGAAAGCAGCGGC TACCGGTCGGCAATCTCTGACGTGTACGGTGTCTCAACCACAACCCTCGAAGCCGAATGGCGCGCCTGGCTGCCCGGTTT TCTCCAGATCGAAGCCGACCAGATGCGGCCAGTGAGCATTGATCTAGAGCCAGTACAACAGTTGATCGCGGCAGGTGATT ACGAAGCGGCACTCCGTGAAGCAGAACGGCTCAGGACGATTGCGGATGAAGAGACGCAACCGACCCTCGCTGCGCTACAG GCGCAAGCCCAAACCGGCCTGCGGGCCAATCAACTGACCGTAGCAGCTCGCACTGCATTGCTGCAAGGAGAATACGAGCA GGCAGAGCGGTTGATCGGGCAGGCAGAGCAGGCTTACCGCGAGATCGGGGATCAGCGGCAAATGACGATTCTTGCCGAAT ACCGGGCCCGCGTCGCACGTGGCTTACAGGCAAGTGAGACGTTACGCCGGGCAAGTGAACAGGCACGCCAGCTAGATCTG GCCGGCGCCAGTGCCAACGCTGAAACGGCGGCTCGCGAGTTTGCCGCTCTCGGTGATGAAGTACGCCGCGACAACGCATT GGCCCTGCGTCGTAGTCTGGCTGCCCAGCAACGCACGATTGCTGTGGCTTTGCTCTTCCTCGGTGCGGCTGTTTTGTCCA TTCGGTTGATCAGCCGCCAGCTTATGACACCTTCCCGACCGTGGTGA
Upstream 100 bases:
>100_bases CTCACCGAATCTGCTCATCGTAGGAAGGCGGGCAAAGAAATCTATTGTCATTGTCTCTCTCCTGGCATCTTGTGATCAAA CGTGGTACACTGAGCTTACC
Downstream 100 bases:
>100_bases TACACGGCAGATCAGGTGATCATGGGGAACTAGAGACAGATCACGATACGGGTATCACAGACGTATCACCCGCTTTTGCG CTATGTACGCGGTGACATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNCLVTTIMIRLRLWLIALGALCVFLSGSVALAQPTWVEQSTTHFRIIYTPDDATIADRYAPIIDDLYNELSTIFEFRPV TPLTLRLYPTSNAYFAANPAARNVPGVIAHADFRRREVVVIVERARLQDEVSQLNNLRHELTHIFAAELSDGKLNVGLQE GIAQYMELPGPDRDGKLAILRALWQRNELWPWAVLDDRNAIYGQPELSYPQTWSIVTFLIERDGFERFRQFLTTLAESSG YRSAISDVYGVSTTTLEAEWRAWLPGFLQIEADQMRPVSIDLEPVQQLIAAGDYEAALREAERLRTIADEETQPTLAALQ AQAQTGLRANQLTVAARTALLQGEYEQAERLIGQAEQAYREIGDQRQMTILAEYRARVARGLQASETLRRASEQARQLDL AGASANAETAAREFAALGDEVRRDNALALRRSLAAQQRTIAVALLFLGAAVLSIRLISRQLMTPSRPW
Sequences:
>Translated_468_residues MNCLVTTIMIRLRLWLIALGALCVFLSGSVALAQPTWVEQSTTHFRIIYTPDDATIADRYAPIIDDLYNELSTIFEFRPV TPLTLRLYPTSNAYFAANPAARNVPGVIAHADFRRREVVVIVERARLQDEVSQLNNLRHELTHIFAAELSDGKLNVGLQE GIAQYMELPGPDRDGKLAILRALWQRNELWPWAVLDDRNAIYGQPELSYPQTWSIVTFLIERDGFERFRQFLTTLAESSG YRSAISDVYGVSTTTLEAEWRAWLPGFLQIEADQMRPVSIDLEPVQQLIAAGDYEAALREAERLRTIADEETQPTLAALQ AQAQTGLRANQLTVAARTALLQGEYEQAERLIGQAEQAYREIGDQRQMTILAEYRARVARGLQASETLRRASEQARQLDL AGASANAETAAREFAALGDEVRRDNALALRRSLAAQQRTIAVALLFLGAAVLSIRLISRQLMTPSRPW >Mature_468_residues MNCLVTTIMIRLRLWLIALGALCVFLSGSVALAQPTWVEQSTTHFRIIYTPDDATIADRYAPIIDDLYNELSTIFEFRPV TPLTLRLYPTSNAYFAANPAARNVPGVIAHADFRRREVVVIVERARLQDEVSQLNNLRHELTHIFAAELSDGKLNVGLQE GIAQYMELPGPDRDGKLAILRALWQRNELWPWAVLDDRNAIYGQPELSYPQTWSIVTFLIERDGFERFRQFLTTLAESSG YRSAISDVYGVSTTTLEAEWRAWLPGFLQIEADQMRPVSIDLEPVQQLIAAGDYEAALREAERLRTIADEETQPTLAALQ AQAQTGLRANQLTVAARTALLQGEYEQAERLIGQAEQAYREIGDQRQMTILAEYRARVARGLQASETLRRASEQARQLDL AGASANAETAAREFAALGDEVRRDNALALRRSLAAQQRTIAVALLFLGAAVLSIRLISRQLMTPSRPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52493; Mature: 52493
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCLVTTIMIRLRLWLIALGALCVFLSGSVALAQPTWVEQSTTHFRIIYTPDDATIADRY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHH APIIDDLYNELSTIFEFRPVTPLTLRLYPTSNAYFAANPAARNVPGVIAHADFRRREVVV HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCEEEECCCCCCEEEE IVERARLQDEVSQLNNLRHELTHIFAAELSDGKLNVGLQEGIAQYMELPGPDRDGKLAIL EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCCCHHHHH RALWQRNELWPWAVLDDRNAIYGQPELSYPQTWSIVTFLIERDGFERFRQFLTTLAESSG HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC YRSAISDVYGVSTTTLEAEWRAWLPGFLQIEADQMRPVSIDLEPVQQLIAAGDYEAALRE HHHHHHHHHCCCCEEEECHHHHCCCCEEEEECCCCCCEEECHHHHHHHHHCCCHHHHHHH AERLRTIADEETQPTLAALQAQAQTGLRANQLTVAARTALLQGEYEQAERLIGQAEQAYR HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EIGDQRQMTILAEYRARVARGLQASETLRRASEQARQLDLAGASANAETAAREFAALGDE HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VRRDNALALRRSLAAQQRTIAVALLFLGAAVLSIRLISRQLMTPSRPW HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNCLVTTIMIRLRLWLIALGALCVFLSGSVALAQPTWVEQSTTHFRIIYTPDDATIADRY CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHH APIIDDLYNELSTIFEFRPVTPLTLRLYPTSNAYFAANPAARNVPGVIAHADFRRREVVV HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCEEEECCCCCCEEEE IVERARLQDEVSQLNNLRHELTHIFAAELSDGKLNVGLQEGIAQYMELPGPDRDGKLAIL EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCCCHHHHH RALWQRNELWPWAVLDDRNAIYGQPELSYPQTWSIVTFLIERDGFERFRQFLTTLAESSG HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC YRSAISDVYGVSTTTLEAEWRAWLPGFLQIEADQMRPVSIDLEPVQQLIAAGDYEAALRE HHHHHHHHHCCCCEEEECHHHHCCCCEEEEECCCCCCEEECHHHHHHHHHCCCHHHHHHH AERLRTIADEETQPTLAALQAQAQTGLRANQLTVAARTALLQGEYEQAERLIGQAEQAYR HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EIGDQRQMTILAEYRARVARGLQASETLRRASEQARQLDLAGASANAETAAREFAALGDE HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VRRDNALALRRSLAAQQRTIAVALLFLGAAVLSIRLISRQLMTPSRPW HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA