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The map label for this gene is ssuC [C]

Identifier: 222525983

GI number: 222525983

Start: 3377095

End: 3377883

Strand: Reverse

Name: ssuC [C]

Synonym: Chy400_2739

Alternate gene names: 222525983

Gene position: 3377883-3377095 (Counterclockwise)

Preceding gene: 222525985

Following gene: 222525982

Centisome position: 64.11

GC content: 58.56

Gene sequence:

>789_bases
ATGGTAAGATATGGCGCTATGGTTAAGACCACACCGCACAACCTGTTTCGCCGCCTGGGACCAGCACTGTTGCTCGGTGT
TGCCCTCGTGATTGGGCTAGAGTGGGGACTGCCGGCTGCCGGTATTCCGGCTTACCTGCTCCCAACCCCATCGCGCGTAA
TAAACGCTGCACTTCAGCCTGAAGTGCGGCTGATATACCATACCGGTGCTACCGCCAGCGCCGCGCTCCTTGGGCTGGCA
ATCGGTATTTGTATCGCGCTTACCCTGGCCATCGCCTTCATCTTTGTCCGTCCGCTGGAAGATGCCCTCTACCCGTGGAT
TCTGCTCGGACAAAGCCTGCCTTCGGTTGCGCTGGCCCCACTGCTTACCATCTGGTTGGGTGACGGCATTGCCCCTCGTG
CTGCGATGGCAGCACTCTTTGCCAGCTTCCCGTTGCTTATTGCCACCATCAGCGGTCTGCGGCGTCCGGCACCCGAACAA
CTGGCCATGATGCAGGCTTATGGCGCTTCACAATGGCAAATCTTGCGGATGCTTCGTTTGCCGGCAGCGCTTCCATTCAT
CTTCAGTGGATTGCGCGTCGCCGGTGCGCTGGCCGTTATTGGGGCGCTGGTTGGTGAACTGGCCGGTGCAGGGCGAGGTC
TAGGCTACCTGATTACGACCTCTACCTACCGGCTAGCCACAGATCGAGCCTTTGCTGCTGTCGCGGCAGCCGCCGGCTTA
GCACTGGTATTACACGGTATTTTTCTTCTACTTGAACGGATCATTGTGTTCTGGGAACGGGAACGGTAA

Upstream 100 bases:

>100_bases
GACCAGTACGATGGAACATTATGTCAAAATCGAGAAGAAGGGTGAGCACCGCGACGAGGGTGTAGATTTCGCTTCTCTAT
TTCCACCTCATGACCAATGT

Downstream 100 bases:

>100_bases
GTGCGGCGTGGACCAGGTTGAACAAAGAGGATCGCATATGTCACACCGTACCTTACTACCATTACTCCTGCTTGTGGTGT
TGCTTGTCGTTACCGGTTGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVRYGAMVKTTPHNLFRRLGPALLLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQPEVRLIYHTGATASAALLGLA
IGICIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAPLLTIWLGDGIAPRAAMAALFASFPLLIATISGLRRPAPEQ
LAMMQAYGASQWQILRMLRLPAALPFIFSGLRVAGALAVIGALVGELAGAGRGLGYLITTSTYRLATDRAFAAVAAAAGL
ALVLHGIFLLLERIIVFWERER

Sequences:

>Translated_262_residues
MVRYGAMVKTTPHNLFRRLGPALLLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQPEVRLIYHTGATASAALLGLA
IGICIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAPLLTIWLGDGIAPRAAMAALFASFPLLIATISGLRRPAPEQ
LAMMQAYGASQWQILRMLRLPAALPFIFSGLRVAGALAVIGALVGELAGAGRGLGYLITTSTYRLATDRAFAAVAAAAGL
ALVLHGIFLLLERIIVFWERER
>Mature_262_residues
MVRYGAMVKTTPHNLFRRLGPALLLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQPEVRLIYHTGATASAALLGLA
IGICIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAPLLTIWLGDGIAPRAAMAALFASFPLLIATISGLRRPAPEQ
LAMMQAYGASQWQILRMLRLPAALPFIFSGLRVAGALAVIGALVGELAGAGRGLGYLITTSTYRLATDRAFAAVAAAAGL
ALVLHGIFLLLERIIVFWERER

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=216, Percent_Identity=30.5555555555556, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786564, Length=227, Percent_Identity=27.7533039647577, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27734; Mature: 27734

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRYGAMVKTTPHNLFRRLGPALLLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQP
CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCC
EVRLIYHTGATASAALLGLAIGICIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAP
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLTIWLGDGIAPRAAMAALFASFPLLIATISGLRRPAPEQLAMMQAYGASQWQILRMLRL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
PAALPFIFSGLRVAGALAVIGALVGELAGAGRGLGYLITTSTYRLATDRAFAAVAAAAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
ALVLHGIFLLLERIIVFWERER
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVRYGAMVKTTPHNLFRRLGPALLLGVALVIGLEWGLPAAGIPAYLLPTPSRVINAALQP
CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHCCC
EVRLIYHTGATASAALLGLAIGICIALTLAIAFIFVRPLEDALYPWILLGQSLPSVALAP
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLTIWLGDGIAPRAAMAALFASFPLLIATISGLRRPAPEQLAMMQAYGASQWQILRMLRL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHH
PAALPFIFSGLRVAGALAVIGALVGELAGAGRGLGYLITTSTYRLATDRAFAAVAAAAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
ALVLHGIFLLLERIIVFWERER
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]