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The map label for this gene is 222525982

Identifier: 222525982

GI number: 222525982

Start: 3376035

End: 3377057

Strand: Reverse

Name: 222525982

Synonym: Chy400_2738

Alternate gene names: NA

Gene position: 3377057-3376035 (Counterclockwise)

Preceding gene: 222525983

Following gene: 222525980

Centisome position: 64.09

GC content: 57.87

Gene sequence:

>1023_bases
ATGTCACACCGTACCTTACTACCATTACTCCTGCTTGTGGTGTTGCTTGTCGTTACCGGTTGTACGAACACAGCCCCAAC
CAGCACGTCGCCGGAAGTGACGAAGGTCACGATGCGATTGCAATGGCTGCCCCAGTTTCAGTTTGCCGGCTATCTGGTTG
CCGAAGCACGCGGCTACTACCGCGATGCCGGCCTGGATGTGACCATCTTGCCCGGTGGACCTGATGCCATACCGCTGCCG
CTGGTTGCGACCGGGGCCGACACCTTCGGTAGCACCGGGGCCGATACGATTCTGATCAGTCGCGAACAAGGCATCGAGGT
TGTCGCACTGGCAACCTGGTTTCAGGCCAGCCCGGTCGCGTTTATGGTGCATCGTGACAGCGGTATTCGCTCACCGCAAG
ACTTCGTTGGGCGTCGGGTCGGTATGTTCTACGGCGACAATGTTGAAACCGAATATCGGGCATTGCTGGCAGCTACCGGT
GTGGATCCGGCCAGCGTCATCGAAATACCAGGCGATTACAGCCTGGCCCCCTTTCTCGAACGGCGCGCCGATGTCTGGCC
GGTGTATGCAACCGACCAGCCGTATACGGCCCGTGCTGCCGGCGCTGATATTGATCTGATCCTTGCCCGTGATTACGGTG
TTGAGCTGATGGGTGATGTGCTCTTTACCACAGCCGAGTTTGCCCGCAACAATCCGAATACAGTACGTGCGTTTGTGCAG
GCTACGTTACGCGGCTGGCAAGAGGCATTGAATGATCCGGCAGCCGCTATCGAAATCATACTGGCCCGCAGCCCTGACTT
CGACCGCGGTCATCTGGAGTTTGAAGCCGCCGAAACGATCAAGCTGCTCCGCTACGGGATCGGCGAGCGCTGTGTTGGCG
CCAGTGATCGTGCAGTGTGGCAGAAAGAGGCGCAACTGCTGCGCTCGTTAGGTGTGCTGAAGAGCGATATCGATCCCGAA
ACTGTTTTACTCACCGACGCGGTTGATGAGTACTACCGCTCACAAGGCATTGAATGCCGATAA

Upstream 100 bases:

>100_bases
GTATTACACGGTATTTTTCTTCTACTTGAACGGATCATTGTGTTCTGGGAACGGGAACGGTAAGTGCGGCGTGGACCAGG
TTGAACAAAGAGGATCGCAT

Downstream 100 bases:

>100_bases
GGTTCTGTAGGGGCGGGTTTAGAACCCGCCCCTACAGATGGTGCATGTACCCAATCACGCGATGAACGAGGGGGCCGAAA
GGATCCATTTTGAATCGCGT

Product: NMT1/THI5 like domain-containing protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; Histidine Kinase; NMT1/THI5 Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; ABC Transporter Periplasmic; NMT1/THI5 Like Family; Membrane Lipoprotein Lipid Attachment Site; GGDEF Domain-Containing Protein; NMT1/THI5-Like Protein; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; ABC Transporter; Sensory Box Histidine Kinase; Diguanylate Cyclase With Extracellular Sensor; PAS/PAC Sensor-Containg Diguanylate Cyclase; ABC Transporter Periplasmic Components; NMT1/THI5-Like Family; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; Diguanylate Cyclase With PAS/PAC Sensor; Pyrimidine Biosynthesis; ABC Transporter Permease; Pyrimidine Biosynthesis ; PAS/GGDEF Domain-Containing Protein; Signal Transduction Response Regulator; Periplasmic-Component Of ABC Transporter; Two-Component Sensor Protein; PasGgdef; PAS/PAC Sensor Hybrid Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Sensory Transduction Histidine Kinase; Pyrimidine Biosynthesis; NMT1/THI5-Ike Domain-Containing Protein; Permease Protein Of ABC Transporter; Lipoprotein; PAS/PAC Sensor-Containing Diguanylate Cyclase; Exported Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSHRTLLPLLLLVVLLVVTGCTNTAPTSTSPEVTKVTMRLQWLPQFQFAGYLVAEARGYYRDAGLDVTILPGGPDAIPLP
LVATGADTFGSTGADTILISREQGIEVVALATWFQASPVAFMVHRDSGIRSPQDFVGRRVGMFYGDNVETEYRALLAATG
VDPASVIEIPGDYSLAPFLERRADVWPVYATDQPYTARAAGADIDLILARDYGVELMGDVLFTTAEFARNNPNTVRAFVQ
ATLRGWQEALNDPAAAIEIILARSPDFDRGHLEFEAAETIKLLRYGIGERCVGASDRAVWQKEAQLLRSLGVLKSDIDPE
TVLLTDAVDEYYRSQGIECR

Sequences:

>Translated_340_residues
MSHRTLLPLLLLVVLLVVTGCTNTAPTSTSPEVTKVTMRLQWLPQFQFAGYLVAEARGYYRDAGLDVTILPGGPDAIPLP
LVATGADTFGSTGADTILISREQGIEVVALATWFQASPVAFMVHRDSGIRSPQDFVGRRVGMFYGDNVETEYRALLAATG
VDPASVIEIPGDYSLAPFLERRADVWPVYATDQPYTARAAGADIDLILARDYGVELMGDVLFTTAEFARNNPNTVRAFVQ
ATLRGWQEALNDPAAAIEIILARSPDFDRGHLEFEAAETIKLLRYGIGERCVGASDRAVWQKEAQLLRSLGVLKSDIDPE
TVLLTDAVDEYYRSQGIECR
>Mature_339_residues
SHRTLLPLLLLVVLLVVTGCTNTAPTSTSPEVTKVTMRLQWLPQFQFAGYLVAEARGYYRDAGLDVTILPGGPDAIPLPL
VATGADTFGSTGADTILISREQGIEVVALATWFQASPVAFMVHRDSGIRSPQDFVGRRVGMFYGDNVETEYRALLAATGV
DPASVIEIPGDYSLAPFLERRADVWPVYATDQPYTARAAGADIDLILARDYGVELMGDVLFTTAEFARNNPNTVRAFVQA
TLRGWQEALNDPAAAIEIILARSPDFDRGHLEFEAAETIKLLRYGIGERCVGASDRAVWQKEAQLLRSLGVLKSDIDPET
VLLTDAVDEYYRSQGIECR

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37173; Mature: 37041

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01070 NUCLEASE_NON_SPEC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRTLLPLLLLVVLLVVTGCTNTAPTSTSPEVTKVTMRLQWLPQFQFAGYLVAEARGYY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCHHHCCEEEECCCCCE
RDAGLDVTILPGGPDAIPLPLVATGADTFGSTGADTILISREQGIEVVALATWFQASPVA
ECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEE
FMVHRDSGIRSPQDFVGRRVGMFYGDNVETEYRALLAATGVDPASVIEIPGDYSLAPFLE
EEEECCCCCCCCHHHHHCEECEEECCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHH
RRADVWPVYATDQPYTARAAGADIDLILARDYGVELMGDVLFTTAEFARNNPNTVRAFVQ
HCCCCCEEEECCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
ATLRGWQEALNDPAAAIEIILARSPDFDRGHLEFEAAETIKLLRYGIGERCVGASDRAVW
HHHHHHHHHHCCHHHEEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHH
QKEAQLLRSLGVLKSDIDPETVLLTDAVDEYYRSQGIECR
HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHRTLLPLLLLVVLLVVTGCTNTAPTSTSPEVTKVTMRLQWLPQFQFAGYLVAEARGYY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCHHHCCEEEECCCCCE
RDAGLDVTILPGGPDAIPLPLVATGADTFGSTGADTILISREQGIEVVALATWFQASPVA
ECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEE
FMVHRDSGIRSPQDFVGRRVGMFYGDNVETEYRALLAATGVDPASVIEIPGDYSLAPFLE
EEEECCCCCCCCHHHHHCEECEEECCCCCHHHHHHHHHCCCCCHHEEECCCCCCHHHHHH
RRADVWPVYATDQPYTARAAGADIDLILARDYGVELMGDVLFTTAEFARNNPNTVRAFVQ
HCCCCCEEEECCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
ATLRGWQEALNDPAAAIEIILARSPDFDRGHLEFEAAETIKLLRYGIGERCVGASDRAVW
HHHHHHHHHHCCHHHEEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHH
QKEAQLLRSLGVLKSDIDPETVLLTDAVDEYYRSQGIECR
HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA