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The map label for this gene is glgC [H]

Identifier: 222525968

GI number: 222525968

Start: 3360951

End: 3362204

Strand: Reverse

Name: glgC [H]

Synonym: Chy400_2724

Alternate gene names: 222525968

Gene position: 3362204-3360951 (Counterclockwise)

Preceding gene: 222525973

Following gene: 222525967

Centisome position: 63.81

GC content: 54.55

Gene sequence:

>1254_bases
ATGCGCATTGTAGCGATGATCATGGCAGGCGGCGAAGGAACTCGGCTCAGTGTGCTTTCGGAAAAGCGCGCCAAACCTTC
AGTGCCCTTCGCCGGTAAGTTTCGCATCATTGACTTTACCCTCTCGAATTGCGTCAACTCTGGCATCTTCGATGTTGCCG
TTCTGACGCAATACCGGCCCCATTCACTCAACGAACATATCGGTATTGGTAAACCATGGGACCTCGACCGTGCCCGTGGC
GGTGTGCGCCTGCTGCAACCGTACCAGGGTCGCCGTGACGAGTCGTGGTATCGGGGCACAGCCGATGCCATTTATCAAAA
CCTGAATTACATCCAGGAACGGCGCGCCGATCTGGTGTTGATCCTCTCTGGCGACCATATCTACAAGATGAACTATAACG
ACATCATTAAAACCCATCTCCAGAAACGGGCCGACCTGACCGTGGCGGTGATGGAGGTTCCCATCGAAGAGACGGATCGC
TTCGGGATTATGACAACCGATGAACATGACCGCATTATCGAATTCACCGAAAAACCGAAGGCGCGGGACAAGGGAAATCT
GGCGTCGATGGGCATTTATGTCTTTAACGCCGATATTCTGATCCGTCGGTTGTCTGAGGGTGGGCCGGAGAAACCACGGA
TCGACTTCGGCAAGGACGTGATTCCAGCTATGGTCGCCGAAGACCGTGTGTTTGCTCATCGCTTCAAGGGGTATTGGGTT
GATGTCGGGACAATCCAGTCGTATTGGGAAACGAGTATGCAATTACTCGATCCATCACTCGATTTCGATCTCTTCGATCC
CAACTGGCTGATCCGCACCCGCAGCGAGGAGCGACCACCGGCCAAGATCGGGCCGCAGGCCAAAGTAACCCAATCGATCA
TCTGCAATGGCTGTACGATCCGTGGCACGGTTATCCATTCGGTCTTGTCGCCCGGAGTGTACGTTTCGCCGGGGGCCATT
GTGCGTGATAGCGTGGTGATGAACGATACCTGGATCGGCCCTGGCGCAGTACTCGACCGGGTGATTGTTGATAAGAAAGT
CGTGGTTGGTGCCGGTGCTCGCCTCGGTTTTGGCGATGATCTAACCGTTCCCAATCGAAAACAACCCGATAAACTCAATA
GCGGGGTAACTGTTGTCGGTAAGTCGGCGCACATTCCAGCCGGCATTACGATTGGCCGTAACGTTGTGATCAACGCCGAC
CGCGATGCCGAAGATTTTCCCGCAGGTGATGTTCCATCGGGCGAGACGATCTGA

Upstream 100 bases:

>100_bases
TTGGCAGCCCGCTCTACGGAGACAAACTGACGTTGCACAATTACCCGCATGCGTTTACAATCGAACGCGCAGCCGGGTTT
TGTAAACATACGGGAGGCAT

Downstream 100 bases:

>100_bases
CACGCAGGACAGATCACAGCCATCAGGGCTGTGACAGATGCAGGCGCCGGACCCGTCAAATGCTCAGTTATCAACGGAGT
CGACATGATACGCACACTCG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRIVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRPHSLNEHIGIGKPWDLDRARG
GVRLLQPYQGRRDESWYRGTADAIYQNLNYIQERRADLVLILSGDHIYKMNYNDIIKTHLQKRADLTVAVMEVPIEETDR
FGIMTTDEHDRIIEFTEKPKARDKGNLASMGIYVFNADILIRRLSEGGPEKPRIDFGKDVIPAMVAEDRVFAHRFKGYWV
DVGTIQSYWETSMQLLDPSLDFDLFDPNWLIRTRSEERPPAKIGPQAKVTQSIICNGCTIRGTVIHSVLSPGVYVSPGAI
VRDSVVMNDTWIGPGAVLDRVIVDKKVVVGAGARLGFGDDLTVPNRKQPDKLNSGVTVVGKSAHIPAGITIGRNVVINAD
RDAEDFPAGDVPSGETI

Sequences:

>Translated_417_residues
MRIVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRPHSLNEHIGIGKPWDLDRARG
GVRLLQPYQGRRDESWYRGTADAIYQNLNYIQERRADLVLILSGDHIYKMNYNDIIKTHLQKRADLTVAVMEVPIEETDR
FGIMTTDEHDRIIEFTEKPKARDKGNLASMGIYVFNADILIRRLSEGGPEKPRIDFGKDVIPAMVAEDRVFAHRFKGYWV
DVGTIQSYWETSMQLLDPSLDFDLFDPNWLIRTRSEERPPAKIGPQAKVTQSIICNGCTIRGTVIHSVLSPGVYVSPGAI
VRDSVVMNDTWIGPGAVLDRVIVDKKVVVGAGARLGFGDDLTVPNRKQPDKLNSGVTVVGKSAHIPAGITIGRNVVINAD
RDAEDFPAGDVPSGETI
>Mature_417_residues
MRIVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRPHSLNEHIGIGKPWDLDRARG
GVRLLQPYQGRRDESWYRGTADAIYQNLNYIQERRADLVLILSGDHIYKMNYNDIIKTHLQKRADLTVAVMEVPIEETDR
FGIMTTDEHDRIIEFTEKPKARDKGNLASMGIYVFNADILIRRLSEGGPEKPRIDFGKDVIPAMVAEDRVFAHRFKGYWV
DVGTIQSYWETSMQLLDPSLDFDLFDPNWLIRTRSEERPPAKIGPQAKVTQSIICNGCTIRGTVIHSVLSPGVYVSPGAI
VRDSVVMNDTWIGPGAVLDRVIVDKKVVVGAGARLGFGDDLTVPNRKQPDKLNSGVTVVGKSAHIPAGITIGRNVVINAD
RDAEDFPAGDVPSGETI

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI11761621, Length=372, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI11761619, Length=405, Percent_Identity=25.1851851851852, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI1789837, Length=380, Percent_Identity=42.8947368421053, Blast_Score=298, Evalue=4e-82,
Organism=Caenorhabditis elegans, GI133931050, Length=366, Percent_Identity=25.1366120218579, Blast_Score=87, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320148, Length=370, Percent_Identity=23.5135135135135, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355443, Length=379, Percent_Identity=25.5936675461741, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24644084, Length=379, Percent_Identity=25.5936675461741, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 46256; Mature: 46256

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRP
CEEEEEEEECCCCCEEEEEHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCEEEEEHCCCCC
HSLNEHIGIGKPWDLDRARGGVRLLQPYQGRRDESWYRGTADAIYQNLNYIQERRADLVL
CCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCEEE
ILSGDHIYKMNYNDIIKTHLQKRADLTVAVMEVPIEETDRFGIMTTDEHDRIIEFTEKPK
EEECCEEEEECHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCEEEECCCCC
ARDKGNLASMGIYVFNADILIRRLSEGGPEKPRIDFGKDVIPAMVAEDRVFAHRFKGYWV
CCCCCCEEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
DVGTIQSYWETSMQLLDPSLDFDLFDPNWLIRTRSEERPPAKIGPQAKVTQSIICNGCTI
EHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEE
RGTVIHSVLSPGVYVSPGAIVRDSVVMNDTWIGPGAVLDRVIVDKKVVVGAGARLGFGDD
EHHHHHHHHCCCEEECCCCEEECCEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
LTVPNRKQPDKLNSGVTVVGKSAHIPAGITIGRNVVINADRDAEDFPAGDVPSGETI
CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRP
CEEEEEEEECCCCCEEEEEHHCCCCCCCCCCCEEEEEEEEHHHHHCCCCEEEEEHCCCCC
HSLNEHIGIGKPWDLDRARGGVRLLQPYQGRRDESWYRGTADAIYQNLNYIQERRADLVL
CCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCEEE
ILSGDHIYKMNYNDIIKTHLQKRADLTVAVMEVPIEETDRFGIMTTDEHDRIIEFTEKPK
EEECCEEEEECHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCEEEECCCCC
ARDKGNLASMGIYVFNADILIRRLSEGGPEKPRIDFGKDVIPAMVAEDRVFAHRFKGYWV
CCCCCCEEEEEEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
DVGTIQSYWETSMQLLDPSLDFDLFDPNWLIRTRSEERPPAKIGPQAKVTQSIICNGCTI
EHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEE
RGTVIHSVLSPGVYVSPGAIVRDSVVMNDTWIGPGAVLDRVIVDKKVVVGAGARLGFGDD
EHHHHHHHHCCCEEECCCCEEECCEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
LTVPNRKQPDKLNSGVTVVGKSAHIPAGITIGRNVVINADRDAEDFPAGDVPSGETI
CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA