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The map label for this gene is glgC [H]

Identifier: 222525967

GI number: 222525967

Start: 3359625

End: 3360866

Strand: Reverse

Name: glgC [H]

Synonym: Chy400_2723

Alternate gene names: 222525967

Gene position: 3360866-3359625 (Counterclockwise)

Preceding gene: 222525968

Following gene: 222525966

Centisome position: 63.79

GC content: 57.17

Gene sequence:

>1242_bases
ATGATACGCACACTCGTGATGATTCTTGCCGGTGGCGACTCGCCGGCCCTCAGTGTTCTCACCGCTGAACGAACTGAGGC
CGCAGTACCTTTCGGCGGTAAGTATCGAATTATCGATTTTGCCCTCTCGAATTGCGTCAATTCGGGCTTATACAATGTTG
CCGTCCTGACCCAGTATCGCCCCCGCTCGCTGCATGCCCATCTCGGTGTCGGCCGTCCGTGGGATCTCGACCGGGCGCAG
GGCGGTTTGCGCTTACTCCATCCATCACCCACGCCCGATGGCGGTGGCTGGCAGCGCGGTACCGCTGATGCAGTGCGCTA
CAACCTCGATTTCGTTGAGGATCAGCAGGTAGATGCGGTTCTGTTACTGGCTGGAGATCACATCTACAAGATGGATTATG
GCCCCCTCCTCAAACTCCATGCCGAACAAGAGGCGGATGTGACGATGGCGGTACGCAGCGTTAGCCCGCACGATGCTCAC
CGCTACGGGATTGTGTCGGTTGGCAGTGATGGCCGGGTTGATCGCTTCGTCGAAAAACCTCGACGCGCCGACTCTAATCT
GGCTTCGATGGGGATTTATGTCTTTCGCAAACAGTTTCTCATCGATCTCTTACGTTCGACCGATGCCGTTGATTTTGGCC
GTCATCTGCTTCCCCAGATCGTGAGCAGCGCCCGTGCTTTCGCGTACAATTTTCAGGGCTATTGGGCCGATGTTGGTACA
GTACAGGCCTATTACGAGGCAAATCTGGCGCTGCTGGCCGAGACACCGGCCCTCGATCTATACGATCCAGAGTGGGTAAT
TCACACTGTTAGCTCGGACCGACCGGGTGCCGAGATCGGCGTCCAGGCCAGAGTCGAGAACAGCTTGCTAAGTGACGGCT
GTCGCGTGTACGGCACAGTCATCGGGTCGGTACTCTCACCGGGTGTCGTTGTTGCCGCCGGTGCGGTGGTACGCGATTCA
GTAGTGCTGGGTGATGCAGTGATTGAGGCAGGTGCTGTCCTTGACCGCTGTATCATTGATGAAGGGGTGCGCATCGGCGA
AGGGGCACACGTCGGGTTTGGTGATGATAATACACCCAACGCTGAAGCACCAGAACGCCTGAATACCGGGCTAACCCTTG
TTGGCTTGAAAGCACAGATTCCGGCAGGAGTACGTATCGGTCGCAATGTTGCCATCAAACCGCGCACGCAGCCGGCTGCA
TTTCCGGCTGATGGTCAGGTACCGAGTGGTGCTACCATCTAA

Upstream 100 bases:

>100_bases
GGGCGAGACGATCTGACACGCAGGACAGATCACAGCCATCAGGGCTGTGACAGATGCAGGCGCCGGACCCGTCAAATGCT
CAGTTATCAACGGAGTCGAC

Downstream 100 bases:

>100_bases
ATGAAAAAAACCGGCAATTAGTTAATAACATGTCAACCATTACCGAACTGACCATAGAACCATCACTACGCTCACGTCTC
CAGCAAGGTCATCCGTGGGT

Product: nucleotidyl transferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MIRTLVMILAGGDSPALSVLTAERTEAAVPFGGKYRIIDFALSNCVNSGLYNVAVLTQYRPRSLHAHLGVGRPWDLDRAQ
GGLRLLHPSPTPDGGGWQRGTADAVRYNLDFVEDQQVDAVLLLAGDHIYKMDYGPLLKLHAEQEADVTMAVRSVSPHDAH
RYGIVSVGSDGRVDRFVEKPRRADSNLASMGIYVFRKQFLIDLLRSTDAVDFGRHLLPQIVSSARAFAYNFQGYWADVGT
VQAYYEANLALLAETPALDLYDPEWVIHTVSSDRPGAEIGVQARVENSLLSDGCRVYGTVIGSVLSPGVVVAAGAVVRDS
VVLGDAVIEAGAVLDRCIIDEGVRIGEGAHVGFGDDNTPNAEAPERLNTGLTLVGLKAQIPAGVRIGRNVAIKPRTQPAA
FPADGQVPSGATI

Sequences:

>Translated_413_residues
MIRTLVMILAGGDSPALSVLTAERTEAAVPFGGKYRIIDFALSNCVNSGLYNVAVLTQYRPRSLHAHLGVGRPWDLDRAQ
GGLRLLHPSPTPDGGGWQRGTADAVRYNLDFVEDQQVDAVLLLAGDHIYKMDYGPLLKLHAEQEADVTMAVRSVSPHDAH
RYGIVSVGSDGRVDRFVEKPRRADSNLASMGIYVFRKQFLIDLLRSTDAVDFGRHLLPQIVSSARAFAYNFQGYWADVGT
VQAYYEANLALLAETPALDLYDPEWVIHTVSSDRPGAEIGVQARVENSLLSDGCRVYGTVIGSVLSPGVVVAAGAVVRDS
VVLGDAVIEAGAVLDRCIIDEGVRIGEGAHVGFGDDNTPNAEAPERLNTGLTLVGLKAQIPAGVRIGRNVAIKPRTQPAA
FPADGQVPSGATI
>Mature_413_residues
MIRTLVMILAGGDSPALSVLTAERTEAAVPFGGKYRIIDFALSNCVNSGLYNVAVLTQYRPRSLHAHLGVGRPWDLDRAQ
GGLRLLHPSPTPDGGGWQRGTADAVRYNLDFVEDQQVDAVLLLAGDHIYKMDYGPLLKLHAEQEADVTMAVRSVSPHDAH
RYGIVSVGSDGRVDRFVEKPRRADSNLASMGIYVFRKQFLIDLLRSTDAVDFGRHLLPQIVSSARAFAYNFQGYWADVGT
VQAYYEANLALLAETPALDLYDPEWVIHTVSSDRPGAEIGVQARVENSLLSDGCRVYGTVIGSVLSPGVVVAAGAVVRDS
VVLGDAVIEAGAVLDRCIIDEGVRIGEGAHVGFGDDNTPNAEAPERLNTGLTLVGLKAQIPAGVRIGRNVAIKPRTQPAA
FPADGQVPSGATI

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI11761619, Length=255, Percent_Identity=25.4901960784314, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI11761621, Length=274, Percent_Identity=25.1824817518248, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1789837, Length=402, Percent_Identity=37.3134328358209, Blast_Score=243, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI133931050, Length=355, Percent_Identity=24.2253521126761, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17509981, Length=255, Percent_Identity=24.7058823529412, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17509979, Length=255, Percent_Identity=24.7058823529412, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6320148, Length=360, Percent_Identity=21.3888888888889, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21355443, Length=339, Percent_Identity=23.8938053097345, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24644084, Length=339, Percent_Identity=23.8938053097345, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 44229; Mature: 44229

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTLVMILAGGDSPALSVLTAERTEAAVPFGGKYRIIDFALSNCVNSGLYNVAVLTQYR
CCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEEEECC
PRSLHAHLGVGRPWDLDRAQGGLRLLHPSPTPDGGGWQRGTADAVRYNLDFVEDQQVDAV
CCCEEEECCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE
LLLAGDHIYKMDYGPLLKLHAEQEADVTMAVRSVSPHDAHRYGIVSVGSDGRVDRFVEKP
EEEECCEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHH
RRADSNLASMGIYVFRKQFLIDLLRSTDAVDFGRHLLPQIVSSARAFAYNFQGYWADVGT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCEEEECCCC
VQAYYEANLALLAETPALDLYDPEWVIHTVSSDRPGAEIGVQARVENSLLSDGCRVYGTV
EEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHCCHHHHHHH
IGSVLSPGVVVAAGAVVRDSVVLGDAVIEAGAVLDRCIIDEGVRIGEGAHVGFGDDNTPN
HHHHHCCCCEEECCHHHHCCEEEHHHHHHHHHHHHHHHHHCCCEECCCCEECCCCCCCCC
AEAPERLNTGLTLVGLKAQIPAGVRIGRNVAIKPRTQPAAFPADGQVPSGATI
CCCCHHHCCCEEEEEEEECCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRTLVMILAGGDSPALSVLTAERTEAAVPFGGKYRIIDFALSNCVNSGLYNVAVLTQYR
CCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEEEEECC
PRSLHAHLGVGRPWDLDRAQGGLRLLHPSPTPDGGGWQRGTADAVRYNLDFVEDQQVDAV
CCCEEEECCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEE
LLLAGDHIYKMDYGPLLKLHAEQEADVTMAVRSVSPHDAHRYGIVSVGSDGRVDRFVEKP
EEEECCEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHH
RRADSNLASMGIYVFRKQFLIDLLRSTDAVDFGRHLLPQIVSSARAFAYNFQGYWADVGT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCEEEECCCC
VQAYYEANLALLAETPALDLYDPEWVIHTVSSDRPGAEIGVQARVENSLLSDGCRVYGTV
EEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHCCHHHHHHH
IGSVLSPGVVVAAGAVVRDSVVLGDAVIEAGAVLDRCIIDEGVRIGEGAHVGFGDDNTPN
HHHHHCCCCEEECCHHHHCCEEEHHHHHHHHHHHHHHHHHCCCEECCCCEECCCCCCCCC
AEAPERLNTGLTLVGLKAQIPAGVRIGRNVAIKPRTQPAAFPADGQVPSGATI
CCCCHHHCCCEEEEEEEECCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA