| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525902
Identifier: 222525902
GI number: 222525902
Start: 3288775
End: 3289086
Strand: Reverse
Name: 222525902
Synonym: Chy400_2657
Alternate gene names: NA
Gene position: 3289086-3288775 (Counterclockwise)
Preceding gene: 222525903
Following gene: 222525901
Centisome position: 62.42
GC content: 48.08
Gene sequence:
>312_bases GTGAAACTACTGCTCGACACTCACAGTTTCATTTGGTTCATAGAAGATAACCTGTCCCTCAGTCTCCGTGCTCGTACATT GATTGAGGAGCCAACCAGTGAAGTGCTTCTCAGTGTGGCGAGCGTTTGGGAGATGGCTATCAAAGTCAGCCTGGGGCGGC TTCAATTGAGCCAGCCCTTCGAGCTGTTTATACCCCATCAACTGCTACTGAACGATATTACTCTGCTCGACATCACTCTC AATCACACTCTGAAGATTGCAACGTTACCATTTCATCATCGCGATCCGTTTGATCGTCTGCTGATTGCGTAA
Upstream 100 bases:
>100_bases AACAGGTCAGACAGCCACGTCGTCCTGGTAGTGCCAGAGGTATGATCCGTATGACGGATGACTTCGATGCGCCGCTGGAA GATTTTCAGGAATATACAGT
Downstream 100 bases:
>100_bases GGTCTGGTTGAAGGAATTCCAATCATTAGTGCCGATAGTATTTTCGATATGTATGGCATGAGTCGGCTCTGGTAGGGTGA AGAATGAGCCTGACCAGTAA
Product: PilT protein domain-containing protein
Products: NA
Alternate protein names: PilT Protein Domain Protein; PilT Protein-Like Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like; PIN Domain Protein
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPFELFIPHQLLLNDITLLDITL NHTLKIATLPFHHRDPFDRLLIA
Sequences:
>Translated_103_residues MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPFELFIPHQLLLNDITLLDITL NHTLKIATLPFHHRDPFDRLLIA >Mature_103_residues MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPFELFIPHQLLLNDITLLDITL NHTLKIATLPFHHRDPFDRLLIA
Specific function: Unknown
COG id: COG3744
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11899; Mature: 11899
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPF CEEEEECCEEEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHEECEEECCCCC ELFIPHQLLLNDITLLDITLNHTLKIATLPFHHRDPFDRLLIA EEECCHHHHHCCEEEEEEEECCEEEEEEECCCCCCCHHHHCCC >Mature Secondary Structure MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPF CEEEEECCEEEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHEECEEECCCCC ELFIPHQLLLNDITLLDITLNHTLKIATLPFHHRDPFDRLLIA EEECCHHHHHCCEEEEEEEECCEEEEEEECCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA